RNA–Protein interactions for RNA: ENST00000555057.5

TTC8-210, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 1 (best)

Gene TTC8, Length 2,113 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-210ENST00000555057 NISCHQ9Y2I1 1504 aa29.05■■■□□ 2.24
TTC8-210ENST00000555057 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
TTC8-210ENST00000555057 ABCC9O60706 1549 aa24.61■■□□□ 1.53
TTC8-210ENST00000555057 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
TTC8-210ENST00000555057 ZCCHC6Q5VYS8 1495 aaKnown RBP24.27■■□□□ 1.48
TTC8-210ENST00000555057 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.43
TTC8-210ENST00000555057 NACADO15069 1562 aa23.85■■□□□ 1.41
TTC8-210ENST00000555057 MYO15BQ96JP2 1530 aa23.83■■□□□ 1.41
TTC8-210ENST00000555057 RB1CC1Q8TDY2 1594 aa23.76■■□□□ 1.39
TTC8-210ENST00000555057 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
TTC8-210ENST00000555057 SCRIBQ14160 1630 aa23.42■■□□□ 1.34
TTC8-210ENST00000555057 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
TTC8-210ENST00000555057 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
TTC8-210ENST00000555057 BICRAQ9NZM4 1560 aa23.07■■□□□ 1.28
TTC8-210ENST00000555057 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
TTC8-210ENST00000555057 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.19
TTC8-210ENST00000555057 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
TTC8-210ENST00000555057 BAZ1AQ9NRL2 1556 aaPredicted RBP22.44■■□□□ 1.18
TTC8-210ENST00000555057 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
TTC8-210ENST00000555057 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
TTC8-210ENST00000555057 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
TTC8-210ENST00000555057 WIZO95785 1651 aa22.23■■□□□ 1.15
TTC8-210ENST00000555057 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
TTC8-210ENST00000555057 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
TTC8-210ENST00000555057 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
TTC8-210ENST00000555057 SMARCA2P51531 1590 aa22.1■■□□□ 1.13
TTC8-210ENST00000555057 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
TTC8-210ENST00000555057 NCAPD3P42695 1498 aa22.06■■□□□ 1.12
TTC8-210ENST00000555057 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
TTC8-210ENST00000555057 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
TTC8-210ENST00000555057 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
TTC8-210ENST00000555057 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
TTC8-210ENST00000555057 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
TTC8-210ENST00000555057 NESP48681 1621 aa21.47■■□□□ 1.03
TTC8-210ENST00000555057 CFTRP13569 1480 aa21.45■■□□□ 1.02
TTC8-210ENST00000555057 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1.01
TTC8-210ENST00000555057 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
TTC8-210ENST00000555057 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
TTC8-210ENST00000555057 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
TTC8-210ENST00000555057 PRDM2Q13029 1718 aa21.18■□□□□ 0.98
TTC8-210ENST00000555057 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
TTC8-210ENST00000555057 ERCC6Q03468 1493 aa21.12■□□□□ 0.97
TTC8-210ENST00000555057 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
TTC8-210ENST00000555057 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
TTC8-210ENST00000555057 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
TTC8-210ENST00000555057 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
TTC8-210ENST00000555057 CUX1P39880 1505 aa21■□□□□ 0.95
TTC8-210ENST00000555057 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
TTC8-210ENST00000555057 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
TTC8-210ENST00000555057 MRC2Q9UBG0 1479 aa20.96■□□□□ 0.95
TTC8-210ENST00000555057 TOPBP1Q92547 1522 aa20.95■□□□□ 0.94
TTC8-210ENST00000555057 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
TTC8-210ENST00000555057 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
TTC8-210ENST00000555057 BIVM-ERCC5R4GMW8 1640 aa20.87■□□□□ 0.93
TTC8-210ENST00000555057 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
TTC8-210ENST00000555057 FGD5Q6ZNL6 1462 aa20.85■□□□□ 0.93
TTC8-210ENST00000555057 WDR62O43379 1518 aa20.84■□□□□ 0.93
TTC8-210ENST00000555057 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
TTC8-210ENST00000555057 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
TTC8-210ENST00000555057 SOGA1O94964 1423 aa20.79■□□□□ 0.92
TTC8-210ENST00000555057 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
TTC8-210ENST00000555057 CUX2O14529 1486 aa20.74■□□□□ 0.91
TTC8-210ENST00000555057 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
TTC8-210ENST00000555057 TDRD9Q8NDG6 1382 aaKnown RBP20.66■□□□□ 0.9
TTC8-210ENST00000555057 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
TTC8-210ENST00000555057 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
TTC8-210ENST00000555057 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
TTC8-210ENST00000555057 ZNF608Q9ULD9 1512 aaPredicted RBP20.6■□□□□ 0.89
TTC8-210ENST00000555057 KIF27Q86VH2 1401 aa20.59■□□□□ 0.89
TTC8-210ENST00000555057 AQRO60306 1485 aaKnown RBP eCLIP20.59■□□□□ 0.89
TTC8-210ENST00000555057 CSRNP3Q8WYN3 585 aa20.56■□□□□ 0.88
TTC8-210ENST00000555057 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
TTC8-210ENST00000555057 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.88
TTC8-210ENST00000555057 GAPVD1Q14C86 1478 aa20.52■□□□□ 0.88
TTC8-210ENST00000555057 IGF1RP08069 1367 aa20.51■□□□□ 0.87
TTC8-210ENST00000555057 EEA1Q15075 1411 aa20.5■□□□□ 0.87
TTC8-210ENST00000555057 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
TTC8-210ENST00000555057 LOC105371045A0A1W2PR82 267 aa20.45■□□□□ 0.86
TTC8-210ENST00000555057 EIF4G3O43432 1585 aaKnown RBP20.43■□□□□ 0.86
TTC8-210ENST00000555057 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
TTC8-210ENST00000555057 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.85
TTC8-210ENST00000555057 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
TTC8-210ENST00000555057 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
TTC8-210ENST00000555057 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
TTC8-210ENST00000555057 PRXQ9BXM0 1461 aa20.33■□□□□ 0.85
TTC8-210ENST00000555057 FBLN2P98095 1184 aa20.33■□□□□ 0.84
TTC8-210ENST00000555057 RAPGEF2Q9Y4G8 1499 aa20.29■□□□□ 0.84
TTC8-210ENST00000555057 UBTFP17480 764 aaKnown RBP20.29■□□□□ 0.84
TTC8-210ENST00000555057 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
TTC8-210ENST00000555057 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
TTC8-210ENST00000555057 MAGI1Q96QZ7 1491 aaPredicted RBP20.26■□□□□ 0.83
TTC8-210ENST00000555057 CUL7Q14999 1698 aa20.25■□□□□ 0.83
TTC8-210ENST00000555057 KIF21BO75037 1637 aa20.23■□□□□ 0.83
TTC8-210ENST00000555057 ADAMTS12P58397 1594 aa20.23■□□□□ 0.83
TTC8-210ENST00000555057 GOLGA3Q08378 1498 aa20.22■□□□□ 0.83
TTC8-210ENST00000555057 SYNJ2O15056 1496 aa20.21■□□□□ 0.83
TTC8-210ENST00000555057 RANGAP1P46060 587 aaPredicted RBP20.15■□□□□ 0.82
TTC8-210ENST00000555057 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
TTC8-210ENST00000555057 TNIKQ9UKE5 1360 aa20.11■□□□□ 0.81
TTC8-210ENST00000555057 CHD1O14646 1710 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms