RNA–Protein interactions for RNA: ENST00000555049.5

CCNK-204, Transcript of cyclin K, humanhuman

TSL 1 (best) BASIC

Gene CCNK, Length 1,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-204ENST00000555049 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
CCNK-204ENST00000555049 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
CCNK-204ENST00000555049 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
CCNK-204ENST00000555049 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
CCNK-204ENST00000555049 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
CCNK-204ENST00000555049 ABCC9O60706 1549 aa20.17■□□□□ 0.82
CCNK-204ENST00000555049 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
CCNK-204ENST00000555049 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
CCNK-204ENST00000555049 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
CCNK-204ENST00000555049 NACADO15069 1562 aa19.37■□□□□ 0.69
CCNK-204ENST00000555049 RB1CC1Q8TDY2 1594 aa19.37■□□□□ 0.69
CCNK-204ENST00000555049 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
CCNK-204ENST00000555049 DCAF1Q9Y4B6 1507 aa19.23■□□□□ 0.67
CCNK-204ENST00000555049 UNC13AQ9UPW8 1703 aa18.93■□□□□ 0.62
CCNK-204ENST00000555049 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCNK-204ENST00000555049 SCRIBQ14160 1630 aa18.87■□□□□ 0.61
CCNK-204ENST00000555049 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
CCNK-204ENST00000555049 FOXD1Q16676 465 aa18.82■□□□□ 0.6
CCNK-204ENST00000555049 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
CCNK-204ENST00000555049 POTEDQ86YR6 584 aa18.52■□□□□ 0.55
CCNK-204ENST00000555049 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
CCNK-204ENST00000555049 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
CCNK-204ENST00000555049 CC2D2AQ9P2K1 1620 aa18.22■□□□□ 0.51
CCNK-204ENST00000555049 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
CCNK-204ENST00000555049 MSH5O43196 834 aa18.05■□□□□ 0.48
CCNK-204ENST00000555049 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
CCNK-204ENST00000555049 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
CCNK-204ENST00000555049 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
CCNK-204ENST00000555049 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
CCNK-204ENST00000555049 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
CCNK-204ENST00000555049 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
CCNK-204ENST00000555049 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
CCNK-204ENST00000555049 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
CCNK-204ENST00000555049 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
CCNK-204ENST00000555049 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
CCNK-204ENST00000555049 WIZO95785 1651 aa17.77■□□□□ 0.43
CCNK-204ENST00000555049 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
CCNK-204ENST00000555049 NESP48681 1621 aa17.5■□□□□ 0.39
CCNK-204ENST00000555049 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
CCNK-204ENST00000555049 PELP1Q8IZL8 1130 aaKnown RBP17.47■□□□□ 0.39
CCNK-204ENST00000555049 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
CCNK-204ENST00000555049 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
CCNK-204ENST00000555049 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
CCNK-204ENST00000555049 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
CCNK-204ENST00000555049 ERCC6Q03468 1493 aa17.33■□□□□ 0.36
CCNK-204ENST00000555049 CFTRP13569 1480 aa17.31■□□□□ 0.36
CCNK-204ENST00000555049 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
CCNK-204ENST00000555049 KIF21AQ7Z4S6 1674 aa17.23■□□□□ 0.35
CCNK-204ENST00000555049 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
CCNK-204ENST00000555049 THOC2Q8NI27 1593 aaKnown RBP17.17■□□□□ 0.34
CCNK-204ENST00000555049 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
CCNK-204ENST00000555049 CEP164Q9UPV0 1460 aa17.14■□□□□ 0.33
CCNK-204ENST00000555049 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
CCNK-204ENST00000555049 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
CCNK-204ENST00000555049 CUX2O14529 1486 aa17.1■□□□□ 0.33
CCNK-204ENST00000555049 HRCP23327 699 aa17.09■□□□□ 0.33
CCNK-204ENST00000555049 MYT1Q01538 1121 aa17.08■□□□□ 0.32
CCNK-204ENST00000555049 WDR62O43379 1518 aa17.05■□□□□ 0.32
CCNK-204ENST00000555049 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
CCNK-204ENST00000555049 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
CCNK-204ENST00000555049 ADRA2BP18089 450 aa16.95■□□□□ 0.3
CCNK-204ENST00000555049 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
CCNK-204ENST00000555049 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
CCNK-204ENST00000555049 ABCC8Q09428 1581 aa16.87■□□□□ 0.29
CCNK-204ENST00000555049 CUX1P39880 1505 aa16.85■□□□□ 0.29
CCNK-204ENST00000555049 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
CCNK-204ENST00000555049 IFT140Q96RY7 1462 aa16.77■□□□□ 0.28
CCNK-204ENST00000555049 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.27
CCNK-204ENST00000555049 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
CCNK-204ENST00000555049 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
CCNK-204ENST00000555049 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
CCNK-204ENST00000555049 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
CCNK-204ENST00000555049 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
CCNK-204ENST00000555049 SOGA1O94964 1423 aa16.72■□□□□ 0.27
CCNK-204ENST00000555049 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
CCNK-204ENST00000555049 BIVM-ERCC5R4GMW8 1640 aa16.68■□□□□ 0.26
CCNK-204ENST00000555049 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.261e-6■■■■□ 24.7
CCNK-204ENST00000555049 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
CCNK-204ENST00000555049 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
CCNK-204ENST00000555049 WDR97A6NE52 1622 aa16.6■□□□□ 0.25
CCNK-204ENST00000555049 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
CCNK-204ENST00000555049 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.24
CCNK-204ENST00000555049 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.24
CCNK-204ENST00000555049 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
CCNK-204ENST00000555049 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
CCNK-204ENST00000555049 SNAPC4Q5SXM2 1469 aa16.49■□□□□ 0.23
CCNK-204ENST00000555049 PBRM1Q86U86 1689 aa16.45■□□□□ 0.22
CCNK-204ENST00000555049 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
CCNK-204ENST00000555049 FBLN2P98095 1184 aa16.42■□□□□ 0.22
CCNK-204ENST00000555049 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
CCNK-204ENST00000555049 TRIM41Q8WV44 630 aa16.42■□□□□ 0.22
CCNK-204ENST00000555049 CHD1O14646 1710 aa16.4■□□□□ 0.22
CCNK-204ENST00000555049 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
CCNK-204ENST00000555049 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
CCNK-204ENST00000555049 KIF27Q86VH2 1401 aa16.38■□□□□ 0.21
CCNK-204ENST00000555049 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
CCNK-204ENST00000555049 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
CCNK-204ENST00000555049 IGF1RP08069 1367 aa16.35■□□□□ 0.21
CCNK-204ENST00000555049 RUSC2Q8N2Y8 1516 aa16.34■□□□□ 0.21
CCNK-204ENST00000555049 FHAD1B1AJZ9 1412 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms