RNA–Protein interactions for RNA: ENST00000555034.5

FOXN3-208, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-208ENST00000555034 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
FOXN3-208ENST00000555034 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
FOXN3-208ENST00000555034 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
FOXN3-208ENST00000555034 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
FOXN3-208ENST00000555034 FOXD1Q16676 465 aa19.19■□□□□ 0.66
FOXN3-208ENST00000555034 NISCHQ9Y2I1 1504 aa19.11■□□□□ 0.65
FOXN3-208ENST00000555034 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
FOXN3-208ENST00000555034 MSH5O43196 834 aa18.06■□□□□ 0.48
FOXN3-208ENST00000555034 PIAS4Q8N2W9 510 aaPredicted RBP17.78■□□□□ 0.44
FOXN3-208ENST00000555034 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
FOXN3-208ENST00000555034 ADRA2BP18089 450 aa17.48■□□□□ 0.39
FOXN3-208ENST00000555034 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
FOXN3-208ENST00000555034 CCDC180Q9P1Z9 1646 aa17.16■□□□□ 0.34
FOXN3-208ENST00000555034 ABCC9O60706 1549 aa17.07■□□□□ 0.32
FOXN3-208ENST00000555034 RB1CC1Q8TDY2 1594 aa16.36■□□□□ 0.21
FOXN3-208ENST00000555034 NACADO15069 1562 aa16.27■□□□□ 0.2
FOXN3-208ENST00000555034 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
FOXN3-208ENST00000555034 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
FOXN3-208ENST00000555034 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
FOXN3-208ENST00000555034 DCAF8L2P0C7V8 631 aa16.1■□□□□ 0.17
FOXN3-208ENST00000555034 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
FOXN3-208ENST00000555034 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
FOXN3-208ENST00000555034 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
FOXN3-208ENST00000555034 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
FOXN3-208ENST00000555034 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
FOXN3-208ENST00000555034 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
FOXN3-208ENST00000555034 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
FOXN3-208ENST00000555034 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
FOXN3-208ENST00000555034 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.11
FOXN3-208ENST00000555034 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
FOXN3-208ENST00000555034 SCRIBQ14160 1630 aa15.52■□□□□ 0.08
FOXN3-208ENST00000555034 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
FOXN3-208ENST00000555034 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
FOXN3-208ENST00000555034 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
FOXN3-208ENST00000555034 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
FOXN3-208ENST00000555034 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
FOXN3-208ENST00000555034 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
FOXN3-208ENST00000555034 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
FOXN3-208ENST00000555034 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
FOXN3-208ENST00000555034 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
FOXN3-208ENST00000555034 NCAPD3P42695 1498 aa15.03■□□□□ -0
FOXN3-208ENST00000555034 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
FOXN3-208ENST00000555034 ATAD2BQ9ULI0 1458 aa14.92□□□□□ -0.02
FOXN3-208ENST00000555034 HMGXB3Q12766 1538 aa14.9□□□□□ -0.02
FOXN3-208ENST00000555034 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
FOXN3-208ENST00000555034 SMARCA4P51532 1647 aa14.86□□□□□ -0.03
FOXN3-208ENST00000555034 CUX2O14529 1486 aa14.85□□□□□ -0.03
FOXN3-208ENST00000555034 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
FOXN3-208ENST00000555034 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
FOXN3-208ENST00000555034 PEG3Q9GZU2 1588 aa14.8□□□□□ -0.04
FOXN3-208ENST00000555034 BAZ1BQ9UIG0 1483 aaKnown RBP14.79□□□□□ -0.04
FOXN3-208ENST00000555034 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
FOXN3-208ENST00000555034 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
FOXN3-208ENST00000555034 PDS5BQ9NTI5 1447 aa14.64□□□□□ -0.07
FOXN3-208ENST00000555034 NESP48681 1621 aa14.63□□□□□ -0.07
FOXN3-208ENST00000555034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.078e-19■□□□□ 10.3
FOXN3-208ENST00000555034 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
FOXN3-208ENST00000555034 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
FOXN3-208ENST00000555034 POTEHQ6S545 545 aa14.46□□□□□ -0.09
FOXN3-208ENST00000555034 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
FOXN3-208ENST00000555034 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
FOXN3-208ENST00000555034 WIZO95785 1651 aa14.42□□□□□ -0.1
FOXN3-208ENST00000555034 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
FOXN3-208ENST00000555034 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
FOXN3-208ENST00000555034 CFTRP13569 1480 aa14.38□□□□□ -0.11
FOXN3-208ENST00000555034 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
FOXN3-208ENST00000555034 WDR62O43379 1518 aa14.38□□□□□ -0.11
FOXN3-208ENST00000555034 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
FOXN3-208ENST00000555034 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
FOXN3-208ENST00000555034 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
FOXN3-208ENST00000555034 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
FOXN3-208ENST00000555034 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
FOXN3-208ENST00000555034 DSG3P32926 999 aa14.27□□□□□ -0.13
FOXN3-208ENST00000555034 CAPN15O75808 1086 aa14.22□□□□□ -0.13
FOXN3-208ENST00000555034 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
FOXN3-208ENST00000555034 URB2Q14146 1524 aaKnown RBP14.18□□□□□ -0.14
FOXN3-208ENST00000555034 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
FOXN3-208ENST00000555034 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
FOXN3-208ENST00000555034 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
FOXN3-208ENST00000555034 PRDM2Q13029 1718 aa14.12□□□□□ -0.15
FOXN3-208ENST00000555034 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
FOXN3-208ENST00000555034 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
FOXN3-208ENST00000555034 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.16
FOXN3-208ENST00000555034 ZNF608Q9ULD9 1512 aaPredicted RBP13.98□□□□□ -0.17
FOXN3-208ENST00000555034 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
FOXN3-208ENST00000555034 EIF4G3O43432 1585 aaKnown RBP13.92□□□□□ -0.18
FOXN3-208ENST00000555034 WDR97A6NE52 1622 aa13.91□□□□□ -0.18
FOXN3-208ENST00000555034 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
FOXN3-208ENST00000555034 SOGA1O94964 1423 aa13.9□□□□□ -0.19
FOXN3-208ENST00000555034 ABCB7O75027 752 aa13.89□□□□□ -0.19
FOXN3-208ENST00000555034 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.19
FOXN3-208ENST00000555034 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
FOXN3-208ENST00000555034 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
FOXN3-208ENST00000555034 ARHGEF11O15085 1522 aa13.85□□□□□ -0.19
FOXN3-208ENST00000555034 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
FOXN3-208ENST00000555034 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
FOXN3-208ENST00000555034 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
FOXN3-208ENST00000555034 FBLN2P98095 1184 aa13.83□□□□□ -0.2
FOXN3-208ENST00000555034 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
FOXN3-208ENST00000555034 FGD5Q6ZNL6 1462 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms