RNA–Protein interactions for RNA: ENST00000555001.1

LINC02308-201, Transcript of long intergenic non-protein coding RNA 2308, humanhuman

TSL 2 BASIC

Gene LINC02308, Length 637 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02308-201ENST00000555001 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
LINC02308-201ENST00000555001 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
LINC02308-201ENST00000555001 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
LINC02308-201ENST00000555001 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
LINC02308-201ENST00000555001 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
LINC02308-201ENST00000555001 FOXD1Q16676 465 aa17.91■□□□□ 0.46
LINC02308-201ENST00000555001 NISCHQ9Y2I1 1504 aa17.86■□□□□ 0.45
LINC02308-201ENST00000555001 MSH5O43196 834 aa17.01■□□□□ 0.31
LINC02308-201ENST00000555001 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
LINC02308-201ENST00000555001 ABCC9O60706 1549 aa16.36■□□□□ 0.21
LINC02308-201ENST00000555001 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
LINC02308-201ENST00000555001 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
LINC02308-201ENST00000555001 ADRA2BP18089 450 aa16.05■□□□□ 0.16
LINC02308-201ENST00000555001 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
LINC02308-201ENST00000555001 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
LINC02308-201ENST00000555001 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
LINC02308-201ENST00000555001 NACADO15069 1562 aa15.38■□□□□ 0.05
LINC02308-201ENST00000555001 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
LINC02308-201ENST00000555001 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
LINC02308-201ENST00000555001 BICRAQ9NZM4 1560 aa15.15■□□□□ 0.02
LINC02308-201ENST00000555001 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
LINC02308-201ENST00000555001 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
LINC02308-201ENST00000555001 DCAF8L2P0C7V8 631 aa15.02■□□□□ -0
LINC02308-201ENST00000555001 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
LINC02308-201ENST00000555001 DMRT2Q9Y5R5 561 aa14.97□□□□□ -0.01
LINC02308-201ENST00000555001 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
LINC02308-201ENST00000555001 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
LINC02308-201ENST00000555001 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
LINC02308-201ENST00000555001 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
LINC02308-201ENST00000555001 EIF4G1Q04637 1599 aaKnown RBP14.75□□□□□ -0.05
LINC02308-201ENST00000555001 ZCCHC6Q5VYS8 1495 aaKnown RBP14.73□□□□□ -0.05
LINC02308-201ENST00000555001 SCRIBQ14160 1630 aa14.66□□□□□ -0.06
LINC02308-201ENST00000555001 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
LINC02308-201ENST00000555001 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
LINC02308-201ENST00000555001 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
LINC02308-201ENST00000555001 RNF39Q9H2S5 420 aa14.46□□□□□ -0.09
LINC02308-201ENST00000555001 CUX2O14529 1486 aa14.3□□□□□ -0.12
LINC02308-201ENST00000555001 NCAPD3P42695 1498 aa14.18□□□□□ -0.14
LINC02308-201ENST00000555001 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
LINC02308-201ENST00000555001 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
LINC02308-201ENST00000555001 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
LINC02308-201ENST00000555001 HMGXB3Q12766 1538 aa14.06□□□□□ -0.16
LINC02308-201ENST00000555001 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
LINC02308-201ENST00000555001 POTEHQ6S545 545 aa14.04□□□□□ -0.16
LINC02308-201ENST00000555001 SMARCA2P51531 1590 aa14.03□□□□□ -0.16
LINC02308-201ENST00000555001 SMARCA4P51532 1647 aa14.02□□□□□ -0.16
LINC02308-201ENST00000555001 NESP48681 1621 aa14.01□□□□□ -0.17
LINC02308-201ENST00000555001 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
LINC02308-201ENST00000555001 PEG3Q9GZU2 1588 aa13.93□□□□□ -0.18
LINC02308-201ENST00000555001 LAMC3Q9Y6N6 1575 aa13.93□□□□□ -0.18
LINC02308-201ENST00000555001 KIF21AQ7Z4S6 1674 aa13.93□□□□□ -0.18
LINC02308-201ENST00000555001 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
LINC02308-201ENST00000555001 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
LINC02308-201ENST00000555001 PDS5BQ9NTI5 1447 aa13.78□□□□□ -0.2
LINC02308-201ENST00000555001 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
LINC02308-201ENST00000555001 MROH2BQ7Z745 1585 aa13.74□□□□□ -0.21
LINC02308-201ENST00000555001 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
LINC02308-201ENST00000555001 WDR62O43379 1518 aa13.72□□□□□ -0.21
LINC02308-201ENST00000555001 TRIM41Q8WV44 630 aa13.71□□□□□ -0.21
LINC02308-201ENST00000555001 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
LINC02308-201ENST00000555001 MRC2Q9UBG0 1479 aa13.68□□□□□ -0.22
LINC02308-201ENST00000555001 CNKSR2Q8WXI2 1034 aa13.65□□□□□ -0.22
LINC02308-201ENST00000555001 WIZO95785 1651 aa13.6□□□□□ -0.23
LINC02308-201ENST00000555001 CEP164Q9UPV0 1460 aa13.56□□□□□ -0.24
LINC02308-201ENST00000555001 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
LINC02308-201ENST00000555001 PRDM2Q13029 1718 aa13.53□□□□□ -0.24
LINC02308-201ENST00000555001 FANCD2Q9BXW9 1451 aa13.52□□□□□ -0.25
LINC02308-201ENST00000555001 CFTRP13569 1480 aa13.5□□□□□ -0.25
LINC02308-201ENST00000555001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC02308-201ENST00000555001 RIMBP3CA6NJZ7 1639 aa13.48□□□□□ -0.25
LINC02308-201ENST00000555001 RIMBP3BA6NNM3 1639 aa13.48□□□□□ -0.25
LINC02308-201ENST00000555001 RIMBP3Q9UFD9 1639 aa13.48□□□□□ -0.25
LINC02308-201ENST00000555001 URB2Q14146 1524 aaKnown RBP13.45□□□□□ -0.26
LINC02308-201ENST00000555001 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
LINC02308-201ENST00000555001 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
LINC02308-201ENST00000555001 RSF1Q96T23 1441 aaPredicted RBP13.32□□□□□ -0.28
LINC02308-201ENST00000555001 IFT140Q96RY7 1462 aa13.32□□□□□ -0.28
LINC02308-201ENST00000555001 ZNF608Q9ULD9 1512 aaPredicted RBP13.31□□□□□ -0.28
LINC02308-201ENST00000555001 CHD1O14646 1710 aa13.3□□□□□ -0.28
LINC02308-201ENST00000555001 DSG3P32926 999 aa13.28□□□□□ -0.28
LINC02308-201ENST00000555001 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
LINC02308-201ENST00000555001 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
LINC02308-201ENST00000555001 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
LINC02308-201ENST00000555001 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
LINC02308-201ENST00000555001 CAPN15O75808 1086 aa13.22□□□□□ -0.29
LINC02308-201ENST00000555001 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.3
LINC02308-201ENST00000555001 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
LINC02308-201ENST00000555001 CYB5RLQ6IPT4 315 aa13.2□□□□□ -0.3
LINC02308-201ENST00000555001 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
LINC02308-201ENST00000555001 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
LINC02308-201ENST00000555001 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC02308-201ENST00000555001 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
LINC02308-201ENST00000555001 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
LINC02308-201ENST00000555001 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
LINC02308-201ENST00000555001 CLASP1Q7Z460 1538 aa13.09□□□□□ -0.31
LINC02308-201ENST00000555001 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
LINC02308-201ENST00000555001 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
LINC02308-201ENST00000555001 FBLN2P98095 1184 aa13.02□□□□□ -0.33
LINC02308-201ENST00000555001 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
LINC02308-201ENST00000555001 SOGA1O94964 1423 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms