RNA–Protein interactions for RNA: ENST00000554541.5

PSMA6-206, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 925 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-206ENST00000554541 NISCHQ9Y2I1 1504 aa28.8■■■□□ 2.2
PSMA6-206ENST00000554541 CCDC180Q9P1Z9 1646 aa25.76■■□□□ 1.71
PSMA6-206ENST00000554541 ABCC9O60706 1549 aa25.43■■□□□ 1.66
PSMA6-206ENST00000554541 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
PSMA6-206ENST00000554541 NACADO15069 1562 aa24.29■■□□□ 1.48
PSMA6-206ENST00000554541 DCAF8L2P0C7V8 631 aa24.09■■□□□ 1.45
PSMA6-206ENST00000554541 MYO15BQ96JP2 1530 aa24.07■■□□□ 1.44
PSMA6-206ENST00000554541 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
PSMA6-206ENST00000554541 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
PSMA6-206ENST00000554541 UNC13AQ9UPW8 1703 aa23.83■■□□□ 1.41
PSMA6-206ENST00000554541 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.384e-6■□□□□ 9.3
PSMA6-206ENST00000554541 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
PSMA6-206ENST00000554541 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
PSMA6-206ENST00000554541 SCRIBQ14160 1630 aa23.43■■□□□ 1.34
PSMA6-206ENST00000554541 SHROOM4Q9ULL8 1493 aa23.4■■□□□ 1.34
PSMA6-206ENST00000554541 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
PSMA6-206ENST00000554541 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
PSMA6-206ENST00000554541 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
PSMA6-206ENST00000554541 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
PSMA6-206ENST00000554541 NCAPD3P42695 1498 aa22.41■■□□□ 1.18
PSMA6-206ENST00000554541 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
PSMA6-206ENST00000554541 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
PSMA6-206ENST00000554541 SMARCA2P51531 1590 aa22.33■■□□□ 1.16
PSMA6-206ENST00000554541 HMGXB3Q12766 1538 aa22.27■■□□□ 1.16
PSMA6-206ENST00000554541 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
PSMA6-206ENST00000554541 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
PSMA6-206ENST00000554541 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
PSMA6-206ENST00000554541 ERCC6Q03468 1493 aa21.94■■□□□ 1.1
PSMA6-206ENST00000554541 WIZO95785 1651 aa21.93■■□□□ 1.1
PSMA6-206ENST00000554541 NESP48681 1621 aa21.93■■□□□ 1.1
PSMA6-206ENST00000554541 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
PSMA6-206ENST00000554541 CUX2O14529 1486 aa21.85■■□□□ 1.09
PSMA6-206ENST00000554541 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
PSMA6-206ENST00000554541 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
PSMA6-206ENST00000554541 PDS5BQ9NTI5 1447 aa21.71■■□□□ 1.07
PSMA6-206ENST00000554541 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
PSMA6-206ENST00000554541 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
PSMA6-206ENST00000554541 KIF21AQ7Z4S6 1674 aa21.68■■□□□ 1.06
PSMA6-206ENST00000554541 CFTRP13569 1480 aa21.55■■□□□ 1.04
PSMA6-206ENST00000554541 DNAJC5Q9H3Z4 198 aa21.52■■□□□ 1.04
PSMA6-206ENST00000554541 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
PSMA6-206ENST00000554541 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
PSMA6-206ENST00000554541 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
PSMA6-206ENST00000554541 WDR62O43379 1518 aa21.46■■□□□ 1.03
PSMA6-206ENST00000554541 CCDC88BA6NC98 1476 aa21.42■■□□□ 1.02
PSMA6-206ENST00000554541 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
PSMA6-206ENST00000554541 URB2Q14146 1524 aaKnown RBP21.28■■□□□ 1
PSMA6-206ENST00000554541 TOPBP1Q92547 1522 aa21.1■□□□□ 0.97
PSMA6-206ENST00000554541 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
PSMA6-206ENST00000554541 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
PSMA6-206ENST00000554541 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
PSMA6-206ENST00000554541 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
PSMA6-206ENST00000554541 ZNF608Q9ULD9 1512 aaPredicted RBP20.96■□□□□ 0.95
PSMA6-206ENST00000554541 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
PSMA6-206ENST00000554541 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
PSMA6-206ENST00000554541 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
PSMA6-206ENST00000554541 OSCARQ8IYS5 282 aa20.87■□□□□ 0.93
PSMA6-206ENST00000554541 CUX1P39880 1505 aa20.83■□□□□ 0.92
PSMA6-206ENST00000554541 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
PSMA6-206ENST00000554541 SOGA1O94964 1423 aa20.79■□□□□ 0.92
PSMA6-206ENST00000554541 AQRO60306 1485 aaKnown RBP eCLIP20.79■□□□□ 0.924e-6■■■■□ 25.5
PSMA6-206ENST00000554541 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
PSMA6-206ENST00000554541 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
PSMA6-206ENST00000554541 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
PSMA6-206ENST00000554541 CHD1O14646 1710 aa20.67■□□□□ 0.9
PSMA6-206ENST00000554541 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
PSMA6-206ENST00000554541 ABCA10Q8WWZ4 1543 aa20.6■□□□□ 0.89
PSMA6-206ENST00000554541 GRIN2BQ13224 1484 aa20.6■□□□□ 0.89
PSMA6-206ENST00000554541 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
PSMA6-206ENST00000554541 BIVM-ERCC5R4GMW8 1640 aa20.59■□□□□ 0.89
PSMA6-206ENST00000554541 MAGI1Q96QZ7 1491 aaPredicted RBP20.58■□□□□ 0.89
PSMA6-206ENST00000554541 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.89
PSMA6-206ENST00000554541 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.89
PSMA6-206ENST00000554541 TOP2BQ02880 1626 aa20.58■□□□□ 0.89
PSMA6-206ENST00000554541 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.89
PSMA6-206ENST00000554541 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
PSMA6-206ENST00000554541 FBLN2P98095 1184 aa20.56■□□□□ 0.88
PSMA6-206ENST00000554541 GAPVD1Q14C86 1478 aa20.56■□□□□ 0.88
PSMA6-206ENST00000554541 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
PSMA6-206ENST00000554541 ABCA5Q8WWZ7 1642 aa20.55■□□□□ 0.88
PSMA6-206ENST00000554541 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
PSMA6-206ENST00000554541 PBRM1Q86U86 1689 aa20.54■□□□□ 0.88
PSMA6-206ENST00000554541 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
PSMA6-206ENST00000554541 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
PSMA6-206ENST00000554541 CLASP1Q7Z460 1538 aa20.45■□□□□ 0.86
PSMA6-206ENST00000554541 ADAMTS12P58397 1594 aa20.36■□□□□ 0.85
PSMA6-206ENST00000554541 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
PSMA6-206ENST00000554541 ERICH3Q5RHP9 1530 aa20.34■□□□□ 0.85
PSMA6-206ENST00000554541 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
PSMA6-206ENST00000554541 GRIN2AQ12879 1464 aa20.33■□□□□ 0.85
PSMA6-206ENST00000554541 FHAD1B1AJZ9 1412 aa20.31■□□□□ 0.84
PSMA6-206ENST00000554541 NUP160Q12769 1436 aa20.27■□□□□ 0.83
PSMA6-206ENST00000554541 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
PSMA6-206ENST00000554541 KIF27Q86VH2 1401 aa20.17■□□□□ 0.82
PSMA6-206ENST00000554541 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
PSMA6-206ENST00000554541 IGF1RP08069 1367 aa20.13■□□□□ 0.81
PSMA6-206ENST00000554541 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
PSMA6-206ENST00000554541 CUL7Q14999 1698 aa20.1■□□□□ 0.81
PSMA6-206ENST00000554541 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
PSMA6-206ENST00000554541 PRG4Q92954 1404 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms