RNA–Protein interactions for RNA: ENST00000554457.1

PSMA6-205, Transcript of proteasome subunit alpha 6, humanhuman

Gene PSMA6, Length 4,730 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-205ENST00000554457 NISCHQ9Y2I1 1504 aa13.23□□□□□ -0.29
PSMA6-205ENST00000554457 DCAF8L2P0C7V8 631 aa13.09□□□□□ -0.31
PSMA6-205ENST00000554457 CHIC1Q5VXU3 224 aa12.95□□□□□ -0.34
PSMA6-205ENST00000554457 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
PSMA6-205ENST00000554457 FAM9AQ8IZU1 332 aaPredicted RBP12.4□□□□□ -0.42
PSMA6-205ENST00000554457 ABCC9O60706 1549 aa11.88□□□□□ -0.51
PSMA6-205ENST00000554457 PHF23Q9BUL5 403 aaPredicted RBP11.59□□□□□ -0.55
PSMA6-205ENST00000554457 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
PSMA6-205ENST00000554457 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
PSMA6-205ENST00000554457 RB1CC1Q8TDY2 1594 aa11.41□□□□□ -0.58
PSMA6-205ENST00000554457 CCDC180Q9P1Z9 1646 aa11.37□□□□□ -0.59
PSMA6-205ENST00000554457 APLP2Q06481 763 aa11.37□□□□□ -0.59
PSMA6-205ENST00000554457 SHROOM4Q9ULL8 1493 aa11.31□□□□□ -0.6
PSMA6-205ENST00000554457 SUPT5HO00267 1087 aaKnown RBP11.31□□□□□ -0.6
PSMA6-205ENST00000554457 NPM1P06748 294 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSMA6-205ENST00000554457 NACADO15069 1562 aa11.22□□□□□ -0.61
PSMA6-205ENST00000554457 MYT1LQ9UL68 1186 aa11.16□□□□□ -0.62
PSMA6-205ENST00000554457 ERCC6Q03468 1493 aa11.07□□□□□ -0.64
PSMA6-205ENST00000554457 FBLN2P98095 1184 aa11.05□□□□□ -0.64
PSMA6-205ENST00000554457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.03□□□□□ -0.64
PSMA6-205ENST00000554457 HNRNPUL2Q1KMD3 747 aaKnown RBP11.03□□□□□ -0.64
PSMA6-205ENST00000554457 ATP1B4Q9UN42 357 aaPredicted RBP10.98□□□□□ -0.65
PSMA6-205ENST00000554457 ESF1Q9H501 851 aaKnown RBP10.98□□□□□ -0.65
PSMA6-205ENST00000554457 PLPPR3Q6T4P5 718 aa10.96□□□□□ -0.65
PSMA6-205ENST00000554457 SCRIBQ14160 1630 aa10.95□□□□□ -0.66
PSMA6-205ENST00000554457 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
PSMA6-205ENST00000554457 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
PSMA6-205ENST00000554457 UBTFP17480 764 aaKnown RBP10.82□□□□□ -0.68
PSMA6-205ENST00000554457 CHMP7Q8WUX9 453 aaPredicted RBP10.82□□□□□ -0.68
PSMA6-205ENST00000554457 CDK11AQ9UQ88 783 aaPredicted RBP10.81□□□□□ -0.68
PSMA6-205ENST00000554457 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
PSMA6-205ENST00000554457 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
PSMA6-205ENST00000554457 CECR2Q9BXF3 1484 aa10.76□□□□□ -0.69
PSMA6-205ENST00000554457 KCNA4P22459 653 aa10.76□□□□□ -0.69
PSMA6-205ENST00000554457 MYO15BQ96JP2 1530 aa10.74□□□□□ -0.69
PSMA6-205ENST00000554457 BAZ1BQ9UIG0 1483 aaKnown RBP10.69□□□□□ -0.7
PSMA6-205ENST00000554457 ZCCHC6Q5VYS8 1495 aaKnown RBP10.68□□□□□ -0.7
PSMA6-205ENST00000554457 DCAF1Q9Y4B6 1507 aa10.68□□□□□ -0.7
PSMA6-205ENST00000554457 SLC24A1O60721 1099 aa10.67□□□□□ -0.7
PSMA6-205ENST00000554457 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
PSMA6-205ENST00000554457 OSCARQ8IYS5 282 aa10.63□□□□□ -0.71
PSMA6-205ENST00000554457 SMARCA2P51531 1590 aa10.61□□□□□ -0.71
PSMA6-205ENST00000554457 ADRA2BP18089 450 aa10.54□□□□□ -0.72
PSMA6-205ENST00000554457 BCANQ96GW7 911 aa10.53□□□□□ -0.72
PSMA6-205ENST00000554457 BAZ1AQ9NRL2 1556 aaPredicted RBP10.51□□□□□ -0.73
PSMA6-205ENST00000554457 FOXD1Q16676 465 aa10.5□□□□□ -0.73
PSMA6-205ENST00000554457 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
PSMA6-205ENST00000554457 ARID4BQ4LE39 1312 aaPredicted RBP10.5□□□□□ -0.73
PSMA6-205ENST00000554457 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
PSMA6-205ENST00000554457 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
PSMA6-205ENST00000554457 SENP3Q9H4L4 574 aaPredicted RBP10.43□□□□□ -0.74
PSMA6-205ENST00000554457 CARMIL2Q6F5E8 1435 aa10.41□□□□□ -0.74
PSMA6-205ENST00000554457 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
PSMA6-205ENST00000554457 ACIN1Q9UKV3 1341 aaKnown RBP10.38□□□□□ -0.75
PSMA6-205ENST00000554457 HDGFP51858 240 aaKnown RBP10.37□□□□□ -0.75
PSMA6-205ENST00000554457 CADPSQ9ULU8 1353 aa10.37□□□□□ -0.75
PSMA6-205ENST00000554457 CEP164Q9UPV0 1460 aa10.37□□□□□ -0.75
PSMA6-205ENST00000554457 SLC4A1APQ9BWU0 796 aaKnown RBP10.37□□□□□ -0.75
PSMA6-205ENST00000554457 DNAJC5BQ9UF47 199 aa10.33□□□□□ -0.76
PSMA6-205ENST00000554457 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
PSMA6-205ENST00000554457 TSPY4P0CV99 314 aa10.29□□□□□ -0.76
PSMA6-205ENST00000554457 TSPY10P0CW01 314 aa10.29□□□□□ -0.76
PSMA6-205ENST00000554457 CYB5RLQ6IPT4 315 aa10.28□□□□□ -0.76
PSMA6-205ENST00000554457 WRNQ14191 1432 aaPredicted RBP eCLIP10.28□□□□□ -0.76
PSMA6-205ENST00000554457 DCAF8L1A6NGE4 600 aa10.26□□□□□ -0.77
PSMA6-205ENST00000554457 KIF27Q86VH2 1401 aa10.26□□□□□ -0.77
PSMA6-205ENST00000554457 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
PSMA6-205ENST00000554457 NCAPD3P42695 1498 aa10.24□□□□□ -0.77
PSMA6-205ENST00000554457 PPP1R15AO75807 674 aaPredicted RBP10.23□□□□□ -0.77
PSMA6-205ENST00000554457 KCNH8Q96L42 1107 aa10.22□□□□□ -0.77
PSMA6-205ENST00000554457 ZNF777Q9ULD5 760 aaPredicted RBP10.22□□□□□ -0.77
PSMA6-205ENST00000554457 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
PSMA6-205ENST00000554457 CUX2O14529 1486 aa10.2□□□□□ -0.78
PSMA6-205ENST00000554457 SOGA1O94964 1423 aa10.19□□□□□ -0.78
PSMA6-205ENST00000554457 HAP1P54257 671 aaPredicted RBP10.19□□□□□ -0.78
PSMA6-205ENST00000554457 ATAD2BQ9ULI0 1458 aa10.19□□□□□ -0.78
PSMA6-205ENST00000554457 DNAJC5Q9H3Z4 198 aa10.19□□□□□ -0.78
PSMA6-205ENST00000554457 RSF1Q96T23 1441 aaPredicted RBP10.18□□□□□ -0.78
PSMA6-205ENST00000554457 MRC2Q9UBG0 1479 aa10.17□□□□□ -0.78
PSMA6-205ENST00000554457 EEA1Q15075 1411 aa10.16□□□□□ -0.78
PSMA6-205ENST00000554457 CLIP1P30622 1438 aa10.15□□□□□ -0.78
PSMA6-205ENST00000554457 SCAF1Q9H7N4 1312 aaKnown RBP10.15□□□□□ -0.78
PSMA6-205ENST00000554457 TRIM52Q96A61 297 aa10.14□□□□□ -0.79
PSMA6-205ENST00000554457 FANCD2Q9BXW9 1451 aa10.14□□□□□ -0.79
PSMA6-205ENST00000554457 NEFMP07197 916 aa10.14□□□□□ -0.79
PSMA6-205ENST00000554457 CC2D2AQ9P2K1 1620 aa10.13□□□□□ -0.79
PSMA6-205ENST00000554457 PPP6R1Q9UPN7 881 aa10.12□□□□□ -0.79
PSMA6-205ENST00000554457 CHGAP10645 457 aaKnown RBP10.12□□□□□ -0.79
PSMA6-205ENST00000554457 FAM50AQ14320 339 aaKnown RBP10.12□□□□□ -0.79
PSMA6-205ENST00000554457 EFCAB2Q5VUJ9 269 aa10.11□□□□□ -0.79
PSMA6-205ENST00000554457 DMRT2Q9Y5R5 561 aa10.11□□□□□ -0.79
PSMA6-205ENST00000554457 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
PSMA6-205ENST00000554457 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
PSMA6-205ENST00000554457 KANK1Q14678 1352 aa10.1□□□□□ -0.79
PSMA6-205ENST00000554457 POGZQ7Z3K3 1410 aa10.08□□□□□ -0.8
PSMA6-205ENST00000554457 GOLGA3Q08378 1498 aa10.08□□□□□ -0.8
PSMA6-205ENST00000554457 FAM69CQ0P6D2 419 aa10.08□□□□□ -0.8
PSMA6-205ENST00000554457 ARID3CA6NKF2 412 aa10.08□□□□□ -0.8
PSMA6-205ENST00000554457 NPM2Q86SE8 214 aaKnown RBP10.07□□□□□ -0.8
PSMA6-205ENST00000554457 MTUS2Q5JR59 1369 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms