RNA–Protein interactions for RNA: ENST00000554397.5

LGMN-208, Transcript of legumain, humanhuman

TSL 4

Gene LGMN, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-208ENST00000554397 NISCHQ9Y2I1 1504 aa38.89■■■■□ 3.82
LGMN-208ENST00000554397 CCDC180Q9P1Z9 1646 aa34.75■■■■□ 3.15
LGMN-208ENST00000554397 ABCC9O60706 1549 aa34.32■■■■□ 3.08
LGMN-208ENST00000554397 RB1CC1Q8TDY2 1594 aa32.88■■■□□ 2.85
LGMN-208ENST00000554397 DCAF8L2P0C7V8 631 aa32.78■■■□□ 2.84
LGMN-208ENST00000554397 NACADO15069 1562 aa32.74■■■□□ 2.83
LGMN-208ENST00000554397 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
LGMN-208ENST00000554397 ZCCHC6Q5VYS8 1495 aaKnown RBP32.32■■■□□ 2.76
LGMN-208ENST00000554397 DCAF1Q9Y4B6 1507 aa32.13■■■□□ 2.73
LGMN-208ENST00000554397 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
LGMN-208ENST00000554397 PABPN1Q86U42 306 aaKnown RBP eCLIP32.01■■■□□ 2.71
LGMN-208ENST00000554397 BICRAQ9NZM4 1560 aa31.8■■■□□ 2.68
LGMN-208ENST00000554397 SCRIBQ14160 1630 aa31.74■■■□□ 2.67
LGMN-208ENST00000554397 DNAJC5BQ9UF47 199 aa31.66■■■□□ 2.66
LGMN-208ENST00000554397 SHROOM4Q9ULL8 1493 aa31.48■■■□□ 2.63
LGMN-208ENST00000554397 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
LGMN-208ENST00000554397 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
LGMN-208ENST00000554397 CECR2Q9BXF3 1484 aa30.87■■■□□ 2.53
LGMN-208ENST00000554397 SMARCA4P51532 1647 aa30.28■■■□□ 2.44
LGMN-208ENST00000554397 BAZ1AQ9NRL2 1556 aaPredicted RBP30.21■■■□□ 2.43
LGMN-208ENST00000554397 NCAPD3P42695 1498 aa30.16■■■□□ 2.42
LGMN-208ENST00000554397 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
LGMN-208ENST00000554397 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
LGMN-208ENST00000554397 HMGXB3Q12766 1538 aa30.02■■■□□ 2.4
LGMN-208ENST00000554397 BAZ1BQ9UIG0 1483 aaKnown RBP29.96■■■□□ 2.39
LGMN-208ENST00000554397 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.39
LGMN-208ENST00000554397 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
LGMN-208ENST00000554397 ERCC6Q03468 1493 aa29.68■■■□□ 2.34
LGMN-208ENST00000554397 WIZO95785 1651 aa29.67■■■□□ 2.34
LGMN-208ENST00000554397 NESP48681 1621 aa29.57■■■□□ 2.32
LGMN-208ENST00000554397 RSF1Q96T23 1441 aaPredicted RBP29.49■■■□□ 2.31
LGMN-208ENST00000554397 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
LGMN-208ENST00000554397 CUX2O14529 1486 aa29.39■■■□□ 2.3
LGMN-208ENST00000554397 TOP2AP11388 1531 aaKnown RBP29.32■■■□□ 2.28
LGMN-208ENST00000554397 PDS5BQ9NTI5 1447 aa29.32■■■□□ 2.28
LGMN-208ENST00000554397 CADPSQ9ULU8 1353 aa29.3■■■□□ 2.28
LGMN-208ENST00000554397 KIF21AQ7Z4S6 1674 aa29.26■■■□□ 2.27
LGMN-208ENST00000554397 THOC2Q8NI27 1593 aaKnown RBP29.19■■■□□ 2.26
LGMN-208ENST00000554397 CFTRP13569 1480 aa29.04■■■□□ 2.24
LGMN-208ENST00000554397 MRC2Q9UBG0 1479 aa29.02■■■□□ 2.24
LGMN-208ENST00000554397 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
LGMN-208ENST00000554397 FANCD2Q9BXW9 1451 aa28.99■■■□□ 2.23
LGMN-208ENST00000554397 CCDC88BA6NC98 1476 aa28.96■■■□□ 2.23
LGMN-208ENST00000554397 WDR62O43379 1518 aa28.9■■■□□ 2.22
LGMN-208ENST00000554397 PRDM2Q13029 1718 aa28.9■■■□□ 2.22
LGMN-208ENST00000554397 DNAJC5Q9H3Z4 198 aa28.81■■■□□ 2.2
LGMN-208ENST00000554397 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
LGMN-208ENST00000554397 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
LGMN-208ENST00000554397 ABCC8Q09428 1581 aa28.49■■■□□ 2.15
LGMN-208ENST00000554397 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
LGMN-208ENST00000554397 DNMBPQ6XZF7 1577 aa28.44■■■□□ 2.14
LGMN-208ENST00000554397 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
LGMN-208ENST00000554397 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
LGMN-208ENST00000554397 POLA1P09884 1462 aaPredicted RBP28.21■■■□□ 2.11
LGMN-208ENST00000554397 EIF4G3O43432 1585 aaKnown RBP28.19■■■□□ 2.1
LGMN-208ENST00000554397 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
LGMN-208ENST00000554397 OSCARQ8IYS5 282 aa28.15■■■□□ 2.1
LGMN-208ENST00000554397 CUX1P39880 1505 aa28.13■■■□□ 2.09
LGMN-208ENST00000554397 FGD5Q6ZNL6 1462 aa28.13■■■□□ 2.09
LGMN-208ENST00000554397 SOGA1O94964 1423 aa28.11■■■□□ 2.09
LGMN-208ENST00000554397 RAD54L2Q9Y4B4 1467 aa28.1■■■□□ 2.09
LGMN-208ENST00000554397 AQRO60306 1485 aaKnown RBP eCLIP28.08■■■□□ 2.09
LGMN-208ENST00000554397 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
LGMN-208ENST00000554397 WDR97A6NE52 1622 aa27.97■■■□□ 2.07
LGMN-208ENST00000554397 FBLN2P98095 1184 aa27.92■■■□□ 2.06
LGMN-208ENST00000554397 CHD1O14646 1710 aa27.92■■■□□ 2.06
LGMN-208ENST00000554397 WRNQ14191 1432 aaPredicted RBP eCLIP27.88■■■□□ 2.05
LGMN-208ENST00000554397 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
LGMN-208ENST00000554397 SNAPC4Q5SXM2 1469 aa27.84■■■□□ 2.05
LGMN-208ENST00000554397 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
LGMN-208ENST00000554397 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.05
LGMN-208ENST00000554397 GRIN2BQ13224 1484 aa27.83■■■□□ 2.04
LGMN-208ENST00000554397 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
LGMN-208ENST00000554397 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
LGMN-208ENST00000554397 PBRM1Q86U86 1689 aa27.8■■■□□ 2.04
LGMN-208ENST00000554397 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
LGMN-208ENST00000554397 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
LGMN-208ENST00000554397 CHMP7Q8WUX9 453 aaPredicted RBP27.76■■■□□ 2.03
LGMN-208ENST00000554397 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
LGMN-208ENST00000554397 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
LGMN-208ENST00000554397 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
LGMN-208ENST00000554397 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
LGMN-208ENST00000554397 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
LGMN-208ENST00000554397 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
LGMN-208ENST00000554397 CLASP1Q7Z460 1538 aa27.53■■■□□ 2
LGMN-208ENST00000554397 ADAMTS12P58397 1594 aa27.52■■■□□ 2
LGMN-208ENST00000554397 ERICH3Q5RHP9 1530 aa27.49■■□□□ 1.99
LGMN-208ENST00000554397 CYB5RLQ6IPT4 315 aa27.47■■□□□ 1.99
LGMN-208ENST00000554397 GRIN2AQ12879 1464 aa27.46■■□□□ 1.99
LGMN-208ENST00000554397 FHAD1B1AJZ9 1412 aa27.45■■□□□ 1.98
LGMN-208ENST00000554397 ARAP1Q96P48 1450 aa27.4■■□□□ 1.98
LGMN-208ENST00000554397 KIF27Q86VH2 1401 aa27.34■■□□□ 1.97
LGMN-208ENST00000554397 CEP170Q5SW79 1584 aa27.33■■□□□ 1.97
LGMN-208ENST00000554397 NUP160Q12769 1436 aa27.31■■□□□ 1.96
LGMN-208ENST00000554397 CUL7Q14999 1698 aa27.23■■□□□ 1.95
LGMN-208ENST00000554397 IGF1RP08069 1367 aa27.19■■□□□ 1.94
LGMN-208ENST00000554397 SHROOM2Q13796 1616 aa27.15■■□□□ 1.94
LGMN-208ENST00000554397 ERCC6L2Q5T890 1561 aa27.13■■□□□ 1.93
LGMN-208ENST00000554397 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
LGMN-208ENST00000554397 TRHP20396 242 aaPredicted RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms