RNA–Protein interactions for RNA: ENST00000554182.5

GSKIP-203, Transcript of GSK3B interacting protein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GSKIP, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-203ENST00000554182 NISCHQ9Y2I1 1504 aa29.73■■■□□ 2.35
GSKIP-203ENST00000554182 AEBP2Q6ZN18 517 aaPredicted RBP27.05■■□□□ 1.92
GSKIP-203ENST00000554182 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
GSKIP-203ENST00000554182 CCDC180Q9P1Z9 1646 aa26.18■■□□□ 1.78
GSKIP-203ENST00000554182 ABCC9O60706 1549 aa25.21■■□□□ 1.63
GSKIP-203ENST00000554182 ZCCHC6Q5VYS8 1495 aaKnown RBP24.86■■□□□ 1.57
GSKIP-203ENST00000554182 DCAF1Q9Y4B6 1507 aa24.7■■□□□ 1.54
GSKIP-203ENST00000554182 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
GSKIP-203ENST00000554182 NACADO15069 1562 aa24.59■■□□□ 1.53
GSKIP-203ENST00000554182 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
GSKIP-203ENST00000554182 RB1CC1Q8TDY2 1594 aa24.49■■□□□ 1.51
GSKIP-203ENST00000554182 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
GSKIP-203ENST00000554182 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
GSKIP-203ENST00000554182 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
GSKIP-203ENST00000554182 SHROOM4Q9ULL8 1493 aa23.66■■□□□ 1.38
GSKIP-203ENST00000554182 PABPN1Q86U42 306 aaKnown RBP eCLIP23.64■■□□□ 1.37
GSKIP-203ENST00000554182 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
GSKIP-203ENST00000554182 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
GSKIP-203ENST00000554182 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
GSKIP-203ENST00000554182 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
GSKIP-203ENST00000554182 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
GSKIP-203ENST00000554182 SMARCA4P51532 1647 aa22.91■■□□□ 1.26
GSKIP-203ENST00000554182 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
GSKIP-203ENST00000554182 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
GSKIP-203ENST00000554182 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
GSKIP-203ENST00000554182 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
GSKIP-203ENST00000554182 PEG3Q9GZU2 1588 aa22.77■■□□□ 1.24
GSKIP-203ENST00000554182 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
GSKIP-203ENST00000554182 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
GSKIP-203ENST00000554182 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
GSKIP-203ENST00000554182 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
GSKIP-203ENST00000554182 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
GSKIP-203ENST00000554182 WIZO95785 1651 aa22.55■■□□□ 1.2
GSKIP-203ENST00000554182 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
GSKIP-203ENST00000554182 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
GSKIP-203ENST00000554182 CCDC88BA6NC98 1476 aa22.2■■□□□ 1.14
GSKIP-203ENST00000554182 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
GSKIP-203ENST00000554182 CFTRP13569 1480 aa22.03■■□□□ 1.12
GSKIP-203ENST00000554182 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
GSKIP-203ENST00000554182 NESP48681 1621 aa21.91■■□□□ 1.1
GSKIP-203ENST00000554182 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
GSKIP-203ENST00000554182 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
GSKIP-203ENST00000554182 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
GSKIP-203ENST00000554182 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
GSKIP-203ENST00000554182 PRDM2Q13029 1718 aa21.65■■□□□ 1.06
GSKIP-203ENST00000554182 MRC2Q9UBG0 1479 aa21.61■■□□□ 1.05
GSKIP-203ENST00000554182 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
GSKIP-203ENST00000554182 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
GSKIP-203ENST00000554182 WDR62O43379 1518 aa21.51■■□□□ 1.03
GSKIP-203ENST00000554182 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
GSKIP-203ENST00000554182 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
GSKIP-203ENST00000554182 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
GSKIP-203ENST00000554182 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
GSKIP-203ENST00000554182 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
GSKIP-203ENST00000554182 CUX1P39880 1505 aa21.43■■□□□ 1.02
GSKIP-203ENST00000554182 CUX2O14529 1486 aa21.42■■□□□ 1.02
GSKIP-203ENST00000554182 FOXD1Q16676 465 aa21.4■■□□□ 1.02
GSKIP-203ENST00000554182 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
GSKIP-203ENST00000554182 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
GSKIP-203ENST00000554182 BIVM-ERCC5R4GMW8 1640 aa21.32■■□□□ 1
GSKIP-203ENST00000554182 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
GSKIP-203ENST00000554182 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
GSKIP-203ENST00000554182 IFT140Q96RY7 1462 aa21.28■■□□□ 1
GSKIP-203ENST00000554182 TRIM41Q8WV44 630 aa21.28■■□□□ 1
GSKIP-203ENST00000554182 SOGA1O94964 1423 aa21.26■□□□□ 0.99
GSKIP-203ENST00000554182 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
GSKIP-203ENST00000554182 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
GSKIP-203ENST00000554182 ABCA10Q8WWZ4 1543 aa21.18■□□□□ 0.98
GSKIP-203ENST00000554182 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
GSKIP-203ENST00000554182 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
GSKIP-203ENST00000554182 ZNF608Q9ULD9 1512 aaPredicted RBP21.06■□□□□ 0.96
GSKIP-203ENST00000554182 TDRD9Q8NDG6 1382 aaKnown RBP21.06■□□□□ 0.96
GSKIP-203ENST00000554182 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
GSKIP-203ENST00000554182 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.95
GSKIP-203ENST00000554182 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
GSKIP-203ENST00000554182 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
GSKIP-203ENST00000554182 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
GSKIP-203ENST00000554182 EEA1Q15075 1411 aa20.97■□□□□ 0.95
GSKIP-203ENST00000554182 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
GSKIP-203ENST00000554182 IGF1RP08069 1367 aa20.92■□□□□ 0.94
GSKIP-203ENST00000554182 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
GSKIP-203ENST00000554182 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
GSKIP-203ENST00000554182 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
GSKIP-203ENST00000554182 CSRNP3Q8WYN3 585 aa20.83■□□□□ 0.93
GSKIP-203ENST00000554182 SNAPC4Q5SXM2 1469 aa20.82■□□□□ 0.92
GSKIP-203ENST00000554182 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
GSKIP-203ENST00000554182 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
GSKIP-203ENST00000554182 CARMIL1Q5VZK9 1371 aa20.77■□□□□ 0.92
GSKIP-203ENST00000554182 PBRM1Q86U86 1689 aa20.77■□□□□ 0.91
GSKIP-203ENST00000554182 CUL7Q14999 1698 aa20.75■□□□□ 0.91
GSKIP-203ENST00000554182 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
GSKIP-203ENST00000554182 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
GSKIP-203ENST00000554182 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
GSKIP-203ENST00000554182 FAM9AQ8IZU1 332 aaPredicted RBP20.72■□□□□ 0.91
GSKIP-203ENST00000554182 RAPGEF2Q9Y4G8 1499 aa20.69■□□□□ 0.9
GSKIP-203ENST00000554182 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
GSKIP-203ENST00000554182 FBLN2P98095 1184 aa20.66■□□□□ 0.9
GSKIP-203ENST00000554182 NUP160Q12769 1436 aa20.61■□□□□ 0.89
GSKIP-203ENST00000554182 KIF21BO75037 1637 aa20.6■□□□□ 0.89
GSKIP-203ENST00000554182 OSCARQ8IYS5 282 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms