RNA–Protein interactions for RNA: ENST00000554047.1

CCNB1IP1-209, Transcript of cyclin B1 interacting protein 1, humanhuman

TSL 5

Gene CCNB1IP1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1-209ENST00000554047 AEBP2Q6ZN18 517 aaPredicted RBP20.97■□□□□ 0.95
CCNB1IP1-209ENST00000554047 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
CCNB1IP1-209ENST00000554047 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
CCNB1IP1-209ENST00000554047 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
CCNB1IP1-209ENST00000554047 FOXD1Q16676 465 aa16.75■□□□□ 0.27
CCNB1IP1-209ENST00000554047 MSH5O43196 834 aa15.78■□□□□ 0.12
CCNB1IP1-209ENST00000554047 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
CCNB1IP1-209ENST00000554047 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
CCNB1IP1-209ENST00000554047 PIAS4Q8N2W9 510 aaPredicted RBP15.59■□□□□ 0.09
CCNB1IP1-209ENST00000554047 PPP6R1Q9UPN7 881 aa15.47■□□□□ 0.07
CCNB1IP1-209ENST00000554047 ADRA2BP18089 450 aa15.41■□□□□ 0.06
CCNB1IP1-209ENST00000554047 NISCHQ9Y2I1 1504 aa15.35■□□□□ 0.05
CCNB1IP1-209ENST00000554047 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
CCNB1IP1-209ENST00000554047 DMRT2Q9Y5R5 561 aa14.2□□□□□ -0.14
CCNB1IP1-209ENST00000554047 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
CCNB1IP1-209ENST00000554047 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
CCNB1IP1-209ENST00000554047 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
CCNB1IP1-209ENST00000554047 CACNB1Q02641 598 aaPredicted RBP13.67□□□□□ -0.22
CCNB1IP1-209ENST00000554047 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
CCNB1IP1-209ENST00000554047 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CCNB1IP1-209ENST00000554047 ABCC9O60706 1549 aa13.51□□□□□ -0.25
CCNB1IP1-209ENST00000554047 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
CCNB1IP1-209ENST00000554047 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
CCNB1IP1-209ENST00000554047 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
CCNB1IP1-209ENST00000554047 KCNA4P22459 653 aa13.29□□□□□ -0.28
CCNB1IP1-209ENST00000554047 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
CCNB1IP1-209ENST00000554047 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
CCNB1IP1-209ENST00000554047 DNAJC5BQ9UF47 199 aa13.19□□□□□ -0.3
CCNB1IP1-209ENST00000554047 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
CCNB1IP1-209ENST00000554047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCNB1IP1-209ENST00000554047 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
CCNB1IP1-209ENST00000554047 NACADO15069 1562 aa12.9□□□□□ -0.35
CCNB1IP1-209ENST00000554047 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
CCNB1IP1-209ENST00000554047 MYO15BQ96JP2 1530 aa12.79□□□□□ -0.36
CCNB1IP1-209ENST00000554047 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
CCNB1IP1-209ENST00000554047 DCAF1Q9Y4B6 1507 aa12.69□□□□□ -0.38
CCNB1IP1-209ENST00000554047 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
CCNB1IP1-209ENST00000554047 UNC13AQ9UPW8 1703 aa12.67□□□□□ -0.38
CCNB1IP1-209ENST00000554047 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
CCNB1IP1-209ENST00000554047 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCNB1IP1-209ENST00000554047 BICRAQ9NZM4 1560 aa12.58□□□□□ -0.4
CCNB1IP1-209ENST00000554047 CAPN15O75808 1086 aa12.51□□□□□ -0.41
CCNB1IP1-209ENST00000554047 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
CCNB1IP1-209ENST00000554047 DSG3P32926 999 aa12.5□□□□□ -0.41
CCNB1IP1-209ENST00000554047 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
CCNB1IP1-209ENST00000554047 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
CCNB1IP1-209ENST00000554047 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
CCNB1IP1-209ENST00000554047 EHMT2Q96KQ7 1210 aa12.38□□□□□ -0.43
CCNB1IP1-209ENST00000554047 POTEHQ6S545 545 aa12.31□□□□□ -0.44
CCNB1IP1-209ENST00000554047 APLP2Q06481 763 aa12.29□□□□□ -0.44
CCNB1IP1-209ENST00000554047 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
CCNB1IP1-209ENST00000554047 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
CCNB1IP1-209ENST00000554047 ZBTB22O15209 634 aa12.23□□□□□ -0.45
CCNB1IP1-209ENST00000554047 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
CCNB1IP1-209ENST00000554047 FOXD4L1Q9NU39 408 aa12.23□□□□□ -0.45
CCNB1IP1-209ENST00000554047 ZNF219Q9P2Y4 722 aaPredicted RBP12.23□□□□□ -0.45
CCNB1IP1-209ENST00000554047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.22□□□□□ -0.45
CCNB1IP1-209ENST00000554047 HNRNPUL2Q1KMD3 747 aaKnown RBP12.22□□□□□ -0.45
CCNB1IP1-209ENST00000554047 CC2D2AQ9P2K1 1620 aa12.22□□□□□ -0.45
CCNB1IP1-209ENST00000554047 ABCB7O75027 752 aa12.19□□□□□ -0.46
CCNB1IP1-209ENST00000554047 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
CCNB1IP1-209ENST00000554047 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
CCNB1IP1-209ENST00000554047 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
CCNB1IP1-209ENST00000554047 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
CCNB1IP1-209ENST00000554047 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
CCNB1IP1-209ENST00000554047 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
CCNB1IP1-209ENST00000554047 ATAD2BQ9ULI0 1458 aa11.91□□□□□ -0.5
CCNB1IP1-209ENST00000554047 BAZ1AQ9NRL2 1556 aaPredicted RBP11.88□□□□□ -0.51
CCNB1IP1-209ENST00000554047 POLA2Q14181 598 aa11.88□□□□□ -0.51
CCNB1IP1-209ENST00000554047 SMARCA2P51531 1590 aa11.86□□□□□ -0.51
CCNB1IP1-209ENST00000554047 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
CCNB1IP1-209ENST00000554047 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
CCNB1IP1-209ENST00000554047 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
CCNB1IP1-209ENST00000554047 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
CCNB1IP1-209ENST00000554047 BAZ1BQ9UIG0 1483 aaKnown RBP11.77□□□□□ -0.52
CCNB1IP1-209ENST00000554047 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
CCNB1IP1-209ENST00000554047 WIZO95785 1651 aa11.7□□□□□ -0.54
CCNB1IP1-209ENST00000554047 NESP48681 1621 aa11.68□□□□□ -0.54
CCNB1IP1-209ENST00000554047 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
CCNB1IP1-209ENST00000554047 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
CCNB1IP1-209ENST00000554047 ZBTB12Q9Y330 459 aaPredicted RBP11.63□□□□□ -0.55
CCNB1IP1-209ENST00000554047 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
CCNB1IP1-209ENST00000554047 AKT1S1Q96B36 256 aa11.62□□□□□ -0.55
CCNB1IP1-209ENST00000554047 LAMC3Q9Y6N6 1575 aa11.6□□□□□ -0.55
CCNB1IP1-209ENST00000554047 CUX2O14529 1486 aa11.57□□□□□ -0.56
CCNB1IP1-209ENST00000554047 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
CCNB1IP1-209ENST00000554047 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
CCNB1IP1-209ENST00000554047 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.56
CCNB1IP1-209ENST00000554047 KIF21AQ7Z4S6 1674 aa11.51□□□□□ -0.57
CCNB1IP1-209ENST00000554047 THOC2Q8NI27 1593 aaKnown RBP11.5□□□□□ -0.57
CCNB1IP1-209ENST00000554047 REM2Q8IYK8 340 aaPredicted RBP11.5□□□□□ -0.57
CCNB1IP1-209ENST00000554047 OSCARQ8IYS5 282 aa11.49□□□□□ -0.57
CCNB1IP1-209ENST00000554047 CFTRP13569 1480 aa11.47□□□□□ -0.57
CCNB1IP1-209ENST00000554047 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
CCNB1IP1-209ENST00000554047 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
CCNB1IP1-209ENST00000554047 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
CCNB1IP1-209ENST00000554047 FANCD2Q9BXW9 1451 aa11.42□□□□□ -0.58
CCNB1IP1-209ENST00000554047 MRC2Q9UBG0 1479 aa11.42□□□□□ -0.58
CCNB1IP1-209ENST00000554047 CEP164Q9UPV0 1460 aa11.4□□□□□ -0.58
CCNB1IP1-209ENST00000554047 DNAJC5Q9H3Z4 198 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms