RNA–Protein interactions for RNA: ENST00000553688.5

PSMA6-203, Transcript of proteasome subunit alpha 6, humanhuman

TSL 5

Gene PSMA6, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-203ENST00000553688 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
PSMA6-203ENST00000553688 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
PSMA6-203ENST00000553688 CCDC180Q9P1Z9 1646 aa16.47■□□□□ 0.23
PSMA6-203ENST00000553688 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
PSMA6-203ENST00000553688 ABCC9O60706 1549 aa15.96■□□□□ 0.15
PSMA6-203ENST00000553688 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
PSMA6-203ENST00000553688 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
PSMA6-203ENST00000553688 NACADO15069 1562 aa15.54■□□□□ 0.08
PSMA6-203ENST00000553688 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
PSMA6-203ENST00000553688 RB1CC1Q8TDY2 1594 aa15.5■□□□□ 0.07
PSMA6-203ENST00000553688 DCAF1Q9Y4B6 1507 aa15.5■□□□□ 0.07
PSMA6-203ENST00000553688 SHROOM4Q9ULL8 1493 aa14.99□□□□□ -0.01
PSMA6-203ENST00000553688 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.014e-6■□□□□ 9.3
PSMA6-203ENST00000553688 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
PSMA6-203ENST00000553688 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
PSMA6-203ENST00000553688 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
PSMA6-203ENST00000553688 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
PSMA6-203ENST00000553688 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
PSMA6-203ENST00000553688 POTEDQ86YR6 584 aa14.55□□□□□ -0.08
PSMA6-203ENST00000553688 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
PSMA6-203ENST00000553688 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
PSMA6-203ENST00000553688 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
PSMA6-203ENST00000553688 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
PSMA6-203ENST00000553688 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
PSMA6-203ENST00000553688 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
PSMA6-203ENST00000553688 SMARCA2P51531 1590 aa14.36□□□□□ -0.11
PSMA6-203ENST00000553688 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
PSMA6-203ENST00000553688 ATAD2BQ9ULI0 1458 aa14.32□□□□□ -0.12
PSMA6-203ENST00000553688 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
PSMA6-203ENST00000553688 MROH2BQ7Z745 1585 aa14.29□□□□□ -0.12
PSMA6-203ENST00000553688 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
PSMA6-203ENST00000553688 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
PSMA6-203ENST00000553688 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
PSMA6-203ENST00000553688 WIZO95785 1651 aa14.07□□□□□ -0.16
PSMA6-203ENST00000553688 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
PSMA6-203ENST00000553688 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
PSMA6-203ENST00000553688 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.18
PSMA6-203ENST00000553688 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
PSMA6-203ENST00000553688 PDS5BQ9NTI5 1447 aa13.91□□□□□ -0.18
PSMA6-203ENST00000553688 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
PSMA6-203ENST00000553688 CFTRP13569 1480 aa13.87□□□□□ -0.19
PSMA6-203ENST00000553688 ERCC6Q03468 1493 aa13.84□□□□□ -0.19
PSMA6-203ENST00000553688 FOXD1Q16676 465 aa13.82□□□□□ -0.2
PSMA6-203ENST00000553688 NESP48681 1621 aa13.8□□□□□ -0.2
PSMA6-203ENST00000553688 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
PSMA6-203ENST00000553688 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
PSMA6-203ENST00000553688 CUX2O14529 1486 aa13.67□□□□□ -0.22
PSMA6-203ENST00000553688 MRC2Q9UBG0 1479 aa13.67□□□□□ -0.22
PSMA6-203ENST00000553688 ABCC8Q09428 1581 aa13.66□□□□□ -0.22
PSMA6-203ENST00000553688 PRDM2Q13029 1718 aa13.59□□□□□ -0.23
PSMA6-203ENST00000553688 KIF21AQ7Z4S6 1674 aa13.58□□□□□ -0.24
PSMA6-203ENST00000553688 WDR62O43379 1518 aa13.58□□□□□ -0.24
PSMA6-203ENST00000553688 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
PSMA6-203ENST00000553688 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.25
PSMA6-203ENST00000553688 DNMBPQ6XZF7 1577 aa13.5□□□□□ -0.25
PSMA6-203ENST00000553688 TOPBP1Q92547 1522 aa13.5□□□□□ -0.25
PSMA6-203ENST00000553688 MSH5O43196 834 aa13.5□□□□□ -0.25
PSMA6-203ENST00000553688 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
PSMA6-203ENST00000553688 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
PSMA6-203ENST00000553688 SOGA1O94964 1423 aa13.41□□□□□ -0.26
PSMA6-203ENST00000553688 CUX1P39880 1505 aa13.4□□□□□ -0.26
PSMA6-203ENST00000553688 POLA1P09884 1462 aaPredicted RBP13.4□□□□□ -0.26
PSMA6-203ENST00000553688 FGD5Q6ZNL6 1462 aa13.37□□□□□ -0.27
PSMA6-203ENST00000553688 TOP2BQ02880 1626 aa13.36□□□□□ -0.27
PSMA6-203ENST00000553688 WDR97A6NE52 1622 aa13.34□□□□□ -0.27
PSMA6-203ENST00000553688 BIVM-ERCC5R4GMW8 1640 aa13.31□□□□□ -0.28
PSMA6-203ENST00000553688 ABCA10Q8WWZ4 1543 aa13.31□□□□□ -0.28
PSMA6-203ENST00000553688 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
PSMA6-203ENST00000553688 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
PSMA6-203ENST00000553688 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
PSMA6-203ENST00000553688 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
PSMA6-203ENST00000553688 TDRD9Q8NDG6 1382 aaKnown RBP13.27□□□□□ -0.29
PSMA6-203ENST00000553688 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
PSMA6-203ENST00000553688 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.29
PSMA6-203ENST00000553688 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
PSMA6-203ENST00000553688 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
PSMA6-203ENST00000553688 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
PSMA6-203ENST00000553688 OSCARQ8IYS5 282 aa13.2□□□□□ -0.3
PSMA6-203ENST00000553688 MAGI1Q96QZ7 1491 aaPredicted RBP13.2□□□□□ -0.3
PSMA6-203ENST00000553688 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
PSMA6-203ENST00000553688 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
PSMA6-203ENST00000553688 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
PSMA6-203ENST00000553688 ABCA5Q8WWZ7 1642 aa13.14□□□□□ -0.31
PSMA6-203ENST00000553688 FBLN2P98095 1184 aa13.14□□□□□ -0.31
PSMA6-203ENST00000553688 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
PSMA6-203ENST00000553688 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
PSMA6-203ENST00000553688 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
PSMA6-203ENST00000553688 EEA1Q15075 1411 aa13.13□□□□□ -0.31
PSMA6-203ENST00000553688 IGF1RP08069 1367 aa13.11□□□□□ -0.31
PSMA6-203ENST00000553688 DNAJC5Q9H3Z4 198 aa13.11□□□□□ -0.31
PSMA6-203ENST00000553688 CARMIL1Q5VZK9 1371 aa13.07□□□□□ -0.32
PSMA6-203ENST00000553688 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
PSMA6-203ENST00000553688 PBRM1Q86U86 1689 aa13.04□□□□□ -0.32
PSMA6-203ENST00000553688 GRIN2AQ12879 1464 aa13.03□□□□□ -0.32
PSMA6-203ENST00000553688 CUL7Q14999 1698 aa13.02□□□□□ -0.32
PSMA6-203ENST00000553688 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
PSMA6-203ENST00000553688 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
PSMA6-203ENST00000553688 NUP160Q12769 1436 aa12.98□□□□□ -0.33
PSMA6-203ENST00000553688 PRXQ9BXM0 1461 aa12.95□□□□□ -0.34
PSMA6-203ENST00000553688 RUSC2Q8N2Y8 1516 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms