RNA–Protein interactions for RNA: ENST00000553687.1

ATP6V1D-203, Transcript of ATPase H+ transporting V1 subunit D, humanhuman

TSL 3

Gene ATP6V1D, Length 627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1D-203ENST00000553687 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
ATP6V1D-203ENST00000553687 ABCC9O60706 1549 aa20.47■□□□□ 0.87
ATP6V1D-203ENST00000553687 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
ATP6V1D-203ENST00000553687 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
ATP6V1D-203ENST00000553687 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
ATP6V1D-203ENST00000553687 NACADO15069 1562 aa19.02■□□□□ 0.63
ATP6V1D-203ENST00000553687 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
ATP6V1D-203ENST00000553687 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
ATP6V1D-203ENST00000553687 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
ATP6V1D-203ENST00000553687 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
ATP6V1D-203ENST00000553687 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
ATP6V1D-203ENST00000553687 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
ATP6V1D-203ENST00000553687 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
ATP6V1D-203ENST00000553687 CC2D2AQ9P2K1 1620 aa18.5■□□□□ 0.55
ATP6V1D-203ENST00000553687 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.55
ATP6V1D-203ENST00000553687 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.54
ATP6V1D-203ENST00000553687 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
ATP6V1D-203ENST00000553687 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
ATP6V1D-203ENST00000553687 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
ATP6V1D-203ENST00000553687 CUX2O14529 1486 aa17.95■□□□□ 0.46
ATP6V1D-203ENST00000553687 ERCC6Q03468 1493 aa17.73■□□□□ 0.43
ATP6V1D-203ENST00000553687 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
ATP6V1D-203ENST00000553687 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
ATP6V1D-203ENST00000553687 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
ATP6V1D-203ENST00000553687 NESP48681 1621 aa17.4■□□□□ 0.38
ATP6V1D-203ENST00000553687 ATAD2BQ9ULI0 1458 aa17.39■□□□□ 0.37
ATP6V1D-203ENST00000553687 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
ATP6V1D-203ENST00000553687 SMARCA2P51531 1590 aa17.33■□□□□ 0.37
ATP6V1D-203ENST00000553687 LAMC3Q9Y6N6 1575 aa17.27■□□□□ 0.35
ATP6V1D-203ENST00000553687 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
ATP6V1D-203ENST00000553687 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
ATP6V1D-203ENST00000553687 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
ATP6V1D-203ENST00000553687 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
ATP6V1D-203ENST00000553687 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
ATP6V1D-203ENST00000553687 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
ATP6V1D-203ENST00000553687 MROH2BQ7Z745 1585 aa17.08■□□□□ 0.32
ATP6V1D-203ENST00000553687 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
ATP6V1D-203ENST00000553687 WDR62O43379 1518 aa17.03■□□□□ 0.32
ATP6V1D-203ENST00000553687 OSCARQ8IYS5 282 aa17■□□□□ 0.31
ATP6V1D-203ENST00000553687 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
ATP6V1D-203ENST00000553687 WIZO95785 1651 aa16.91■□□□□ 0.3
ATP6V1D-203ENST00000553687 RIMBP3CA6NJZ7 1639 aa16.85■□□□□ 0.29
ATP6V1D-203ENST00000553687 RIMBP3BA6NNM3 1639 aa16.85■□□□□ 0.29
ATP6V1D-203ENST00000553687 RIMBP3Q9UFD9 1639 aa16.85■□□□□ 0.29
ATP6V1D-203ENST00000553687 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
ATP6V1D-203ENST00000553687 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
ATP6V1D-203ENST00000553687 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
ATP6V1D-203ENST00000553687 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
ATP6V1D-203ENST00000553687 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
ATP6V1D-203ENST00000553687 CFTRP13569 1480 aa16.66■□□□□ 0.26
ATP6V1D-203ENST00000553687 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
ATP6V1D-203ENST00000553687 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
ATP6V1D-203ENST00000553687 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
ATP6V1D-203ENST00000553687 AEBP2Q6ZN18 517 aaPredicted RBP16.59■□□□□ 0.25
ATP6V1D-203ENST00000553687 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
ATP6V1D-203ENST00000553687 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
ATP6V1D-203ENST00000553687 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
ATP6V1D-203ENST00000553687 ARAP1Q96P48 1450 aa16.51■□□□□ 0.23
ATP6V1D-203ENST00000553687 CHD1O14646 1710 aa16.46■□□□□ 0.23
ATP6V1D-203ENST00000553687 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
ATP6V1D-203ENST00000553687 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
ATP6V1D-203ENST00000553687 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
ATP6V1D-203ENST00000553687 ABCC8Q09428 1581 aa16.36■□□□□ 0.21
ATP6V1D-203ENST00000553687 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
ATP6V1D-203ENST00000553687 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.2
ATP6V1D-203ENST00000553687 FBLN2P98095 1184 aa16.3■□□□□ 0.2
ATP6V1D-203ENST00000553687 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
ATP6V1D-203ENST00000553687 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
ATP6V1D-203ENST00000553687 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
ATP6V1D-203ENST00000553687 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
ATP6V1D-203ENST00000553687 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
ATP6V1D-203ENST00000553687 WDR97A6NE52 1622 aa16.15■□□□□ 0.18
ATP6V1D-203ENST00000553687 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
ATP6V1D-203ENST00000553687 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
ATP6V1D-203ENST00000553687 TDRD9Q8NDG6 1382 aaKnown RBP16.11■□□□□ 0.17
ATP6V1D-203ENST00000553687 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
ATP6V1D-203ENST00000553687 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
ATP6V1D-203ENST00000553687 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
ATP6V1D-203ENST00000553687 SOGA1O94964 1423 aa16.09■□□□□ 0.17
ATP6V1D-203ENST00000553687 SYNJ2O15056 1496 aa16.05■□□□□ 0.16
ATP6V1D-203ENST00000553687 CUX1P39880 1505 aa16.04■□□□□ 0.16
ATP6V1D-203ENST00000553687 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
ATP6V1D-203ENST00000553687 FGD5Q6ZNL6 1462 aa15.98■□□□□ 0.15
ATP6V1D-203ENST00000553687 KIF13AQ9H1H9 1805 aa15.96■□□□□ 0.15
ATP6V1D-203ENST00000553687 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
ATP6V1D-203ENST00000553687 ILDR1Q86SU0 546 aaPredicted RBP15.94■□□□□ 0.14
ATP6V1D-203ENST00000553687 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
ATP6V1D-203ENST00000553687 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
ATP6V1D-203ENST00000553687 CEP170Q5SW79 1584 aa15.86■□□□□ 0.13
ATP6V1D-203ENST00000553687 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
ATP6V1D-203ENST00000553687 SHROOM2Q13796 1616 aa15.83■□□□□ 0.12
ATP6V1D-203ENST00000553687 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
ATP6V1D-203ENST00000553687 GRIN2AQ12879 1464 aa15.82■□□□□ 0.12
ATP6V1D-203ENST00000553687 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
ATP6V1D-203ENST00000553687 NUP160Q12769 1436 aa15.8■□□□□ 0.12
ATP6V1D-203ENST00000553687 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
ATP6V1D-203ENST00000553687 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
ATP6V1D-203ENST00000553687 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.11
ATP6V1D-203ENST00000553687 FAM69CQ0P6D2 419 aa15.75■□□□□ 0.11
ATP6V1D-203ENST00000553687 KDM6BO15054 1643 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms