RNA–Protein interactions for RNA: ENST00000553666.1

NDUFB1-203, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 2

Gene NDUFB1, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-203ENST00000553666 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
NDUFB1-203ENST00000553666 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
NDUFB1-203ENST00000553666 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
NDUFB1-203ENST00000553666 ABCC9O60706 1549 aa25.08■■□□□ 1.6
NDUFB1-203ENST00000553666 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
NDUFB1-203ENST00000553666 DCAF8L2P0C7V8 631 aa24.6■■□□□ 1.53
NDUFB1-203ENST00000553666 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
NDUFB1-203ENST00000553666 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
NDUFB1-203ENST00000553666 NACADO15069 1562 aa24.27■■□□□ 1.48
NDUFB1-203ENST00000553666 MYO15BQ96JP2 1530 aa24.22■■□□□ 1.47
NDUFB1-203ENST00000553666 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.47
NDUFB1-203ENST00000553666 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
NDUFB1-203ENST00000553666 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
NDUFB1-203ENST00000553666 SHROOM4Q9ULL8 1493 aa23.63■■□□□ 1.37
NDUFB1-203ENST00000553666 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
NDUFB1-203ENST00000553666 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
NDUFB1-203ENST00000553666 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
NDUFB1-203ENST00000553666 EIF4G1Q04637 1599 aaKnown RBP22.83■■□□□ 1.25
NDUFB1-203ENST00000553666 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
NDUFB1-203ENST00000553666 DNAJC5BQ9UF47 199 aa22.74■■□□□ 1.23
NDUFB1-203ENST00000553666 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
NDUFB1-203ENST00000553666 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
NDUFB1-203ENST00000553666 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
NDUFB1-203ENST00000553666 RSF1Q96T23 1441 aaPredicted RBP22.62■■□□□ 1.21
NDUFB1-203ENST00000553666 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
NDUFB1-203ENST00000553666 WIZO95785 1651 aa22.5■■□□□ 1.19
NDUFB1-203ENST00000553666 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
NDUFB1-203ENST00000553666 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
NDUFB1-203ENST00000553666 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.18
NDUFB1-203ENST00000553666 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
NDUFB1-203ENST00000553666 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
NDUFB1-203ENST00000553666 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
NDUFB1-203ENST00000553666 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
NDUFB1-203ENST00000553666 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
NDUFB1-203ENST00000553666 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
NDUFB1-203ENST00000553666 PHF23Q9BUL5 403 aaPredicted RBP21.98■■□□□ 1.11
NDUFB1-203ENST00000553666 NESP48681 1621 aa21.83■■□□□ 1.09
NDUFB1-203ENST00000553666 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
NDUFB1-203ENST00000553666 CFTRP13569 1480 aa21.76■■□□□ 1.07
NDUFB1-203ENST00000553666 LAMC3Q9Y6N6 1575 aa21.73■■□□□ 1.07
NDUFB1-203ENST00000553666 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
NDUFB1-203ENST00000553666 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
NDUFB1-203ENST00000553666 PRDM2Q13029 1718 aa21.56■■□□□ 1.04
NDUFB1-203ENST00000553666 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
NDUFB1-203ENST00000553666 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
NDUFB1-203ENST00000553666 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
NDUFB1-203ENST00000553666 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
NDUFB1-203ENST00000553666 MRC2Q9UBG0 1479 aa21.35■■□□□ 1.01
NDUFB1-203ENST00000553666 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
NDUFB1-203ENST00000553666 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
NDUFB1-203ENST00000553666 WRNQ14191 1432 aaPredicted RBP eCLIP21.28■■□□□ 1
NDUFB1-203ENST00000553666 CUX1P39880 1505 aa21.27■■□□□ 1
NDUFB1-203ENST00000553666 TOPBP1Q92547 1522 aa21.26■□□□□ 0.99
NDUFB1-203ENST00000553666 WDR62O43379 1518 aa21.26■□□□□ 0.99
NDUFB1-203ENST00000553666 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
NDUFB1-203ENST00000553666 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
NDUFB1-203ENST00000553666 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
NDUFB1-203ENST00000553666 TOP2BQ02880 1626 aa21.16■□□□□ 0.98
NDUFB1-203ENST00000553666 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
NDUFB1-203ENST00000553666 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.97
NDUFB1-203ENST00000553666 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
NDUFB1-203ENST00000553666 CUX2O14529 1486 aa21.09■□□□□ 0.97
NDUFB1-203ENST00000553666 RAD54L2Q9Y4B4 1467 aa21.08■□□□□ 0.96
NDUFB1-203ENST00000553666 SOGA1O94964 1423 aa21.08■□□□□ 0.96
NDUFB1-203ENST00000553666 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
NDUFB1-203ENST00000553666 TARBP1Q13395 1621 aaKnown RBP20.99■□□□□ 0.95
NDUFB1-203ENST00000553666 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
NDUFB1-203ENST00000553666 TDRD9Q8NDG6 1382 aaKnown RBP20.93■□□□□ 0.94
NDUFB1-203ENST00000553666 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
NDUFB1-203ENST00000553666 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.94
NDUFB1-203ENST00000553666 WDR97A6NE52 1622 aa20.88■□□□□ 0.93
NDUFB1-203ENST00000553666 RUSC2Q8N2Y8 1516 aa20.85■□□□□ 0.93
NDUFB1-203ENST00000553666 KIF27Q86VH2 1401 aa20.81■□□□□ 0.92
NDUFB1-203ENST00000553666 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
NDUFB1-203ENST00000553666 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
NDUFB1-203ENST00000553666 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
NDUFB1-203ENST00000553666 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
NDUFB1-203ENST00000553666 GRIN2BQ13224 1484 aa20.73■□□□□ 0.91
NDUFB1-203ENST00000553666 IGF1RP08069 1367 aa20.72■□□□□ 0.91
NDUFB1-203ENST00000553666 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
NDUFB1-203ENST00000553666 FOXD1Q16676 465 aa20.67■□□□□ 0.9
NDUFB1-203ENST00000553666 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
NDUFB1-203ENST00000553666 SNAPC4Q5SXM2 1469 aa20.66■□□□□ 0.9
NDUFB1-203ENST00000553666 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
NDUFB1-203ENST00000553666 EEA1Q15075 1411 aa20.64■□□□□ 0.89
NDUFB1-203ENST00000553666 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
NDUFB1-203ENST00000553666 FBLN2P98095 1184 aa20.6■□□□□ 0.89
NDUFB1-203ENST00000553666 MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
NDUFB1-203ENST00000553666 CHMP7Q8WUX9 453 aaPredicted RBP20.57■□□□□ 0.88
NDUFB1-203ENST00000553666 FHAD1B1AJZ9 1412 aa20.57■□□□□ 0.88
NDUFB1-203ENST00000553666 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
NDUFB1-203ENST00000553666 EHMT2Q96KQ7 1210 aa20.53■□□□□ 0.88
NDUFB1-203ENST00000553666 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
NDUFB1-203ENST00000553666 CUL7Q14999 1698 aa20.52■□□□□ 0.88
NDUFB1-203ENST00000553666 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
NDUFB1-203ENST00000553666 CHD1O14646 1710 aa20.48■□□□□ 0.87
NDUFB1-203ENST00000553666 RAPGEF2Q9Y4G8 1499 aa20.48■□□□□ 0.87
NDUFB1-203ENST00000553666 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
NDUFB1-203ENST00000553666 OSCARQ8IYS5 282 aa20.42■□□□□ 0.86
NDUFB1-203ENST00000553666 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms