RNA–Protein interactions for RNA: ENST00000553571.5

NSFL1C-210, Transcript of NSFL1 cofactor, humanhuman

TSL 4

Gene NSFL1C, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-210ENST00000553571 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
NSFL1C-210ENST00000553571 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
NSFL1C-210ENST00000553571 ABCC9O60706 1549 aa22.36■■□□□ 1.17
NSFL1C-210ENST00000553571 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
NSFL1C-210ENST00000553571 NACADO15069 1562 aa21.34■■□□□ 1.01
NSFL1C-210ENST00000553571 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
NSFL1C-210ENST00000553571 UNC13AQ9UPW8 1703 aa21.06■□□□□ 0.96
NSFL1C-210ENST00000553571 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
NSFL1C-210ENST00000553571 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
NSFL1C-210ENST00000553571 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
NSFL1C-210ENST00000553571 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
NSFL1C-210ENST00000553571 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
NSFL1C-210ENST00000553571 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
NSFL1C-210ENST00000553571 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
NSFL1C-210ENST00000553571 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
NSFL1C-210ENST00000553571 CC2D2AQ9P2K1 1620 aa20.31■□□□□ 0.84
NSFL1C-210ENST00000553571 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
NSFL1C-210ENST00000553571 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
NSFL1C-210ENST00000553571 NCAPD3P42695 1498 aa19.64■□□□□ 0.73
NSFL1C-210ENST00000553571 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
NSFL1C-210ENST00000553571 SMARCA2P51531 1590 aa19.58■□□□□ 0.73
NSFL1C-210ENST00000553571 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
NSFL1C-210ENST00000553571 ATAD2BQ9ULI0 1458 aa19.55■□□□□ 0.72
NSFL1C-210ENST00000553571 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
NSFL1C-210ENST00000553571 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
NSFL1C-210ENST00000553571 CUX2O14529 1486 aa19.4■□□□□ 0.7
NSFL1C-210ENST00000553571 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
NSFL1C-210ENST00000553571 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
NSFL1C-210ENST00000553571 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
NSFL1C-210ENST00000553571 LAMC3Q9Y6N6 1575 aa19.26■□□□□ 0.67
NSFL1C-210ENST00000553571 NESP48681 1621 aa19.22■□□□□ 0.67
NSFL1C-210ENST00000553571 DNAJC5Q9H3Z4 198 aa19.21■□□□□ 0.67
NSFL1C-210ENST00000553571 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
NSFL1C-210ENST00000553571 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
NSFL1C-210ENST00000553571 WIZO95785 1651 aa19.09■□□□□ 0.65
NSFL1C-210ENST00000553571 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
NSFL1C-210ENST00000553571 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
NSFL1C-210ENST00000553571 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
NSFL1C-210ENST00000553571 WDR62O43379 1518 aa18.9■□□□□ 0.62
NSFL1C-210ENST00000553571 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
NSFL1C-210ENST00000553571 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
NSFL1C-210ENST00000553571 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
NSFL1C-210ENST00000553571 CFTRP13569 1480 aa18.84■□□□□ 0.61
NSFL1C-210ENST00000553571 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
NSFL1C-210ENST00000553571 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
NSFL1C-210ENST00000553571 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
NSFL1C-210ENST00000553571 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
NSFL1C-210ENST00000553571 ABCC8Q09428 1581 aa18.49■□□□□ 0.55
NSFL1C-210ENST00000553571 IFT140Q96RY7 1462 aa18.46■□□□□ 0.55
NSFL1C-210ENST00000553571 TOPBP1Q92547 1522 aa18.46■□□□□ 0.55
NSFL1C-210ENST00000553571 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
NSFL1C-210ENST00000553571 OSCARQ8IYS5 282 aa18.37■□□□□ 0.53
NSFL1C-210ENST00000553571 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
NSFL1C-210ENST00000553571 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
NSFL1C-210ENST00000553571 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
NSFL1C-210ENST00000553571 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
NSFL1C-210ENST00000553571 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
NSFL1C-210ENST00000553571 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
NSFL1C-210ENST00000553571 CHD1O14646 1710 aa18.25■□□□□ 0.51
NSFL1C-210ENST00000553571 RIMBP3CA6NJZ7 1639 aa18.24■□□□□ 0.51
NSFL1C-210ENST00000553571 RIMBP3BA6NNM3 1639 aa18.24■□□□□ 0.51
NSFL1C-210ENST00000553571 RIMBP3Q9UFD9 1639 aa18.24■□□□□ 0.51
NSFL1C-210ENST00000553571 ARHGEF11O15085 1522 aa18.17■□□□□ 0.5
NSFL1C-210ENST00000553571 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.52e-7■■□□□ 12.8
NSFL1C-210ENST00000553571 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
NSFL1C-210ENST00000553571 CUX1P39880 1505 aa18.14■□□□□ 0.49
NSFL1C-210ENST00000553571 SOGA1O94964 1423 aa18.13■□□□□ 0.49
NSFL1C-210ENST00000553571 RAD54L2Q9Y4B4 1467 aa18.12■□□□□ 0.49
NSFL1C-210ENST00000553571 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
NSFL1C-210ENST00000553571 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
NSFL1C-210ENST00000553571 SNAPC4Q5SXM2 1469 aa18.04■□□□□ 0.48
NSFL1C-210ENST00000553571 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
NSFL1C-210ENST00000553571 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
NSFL1C-210ENST00000553571 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
NSFL1C-210ENST00000553571 SYNJ1O43426 1573 aa18.01■□□□□ 0.47
NSFL1C-210ENST00000553571 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
NSFL1C-210ENST00000553571 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
NSFL1C-210ENST00000553571 SYNJ2O15056 1496 aa17.98■□□□□ 0.47
NSFL1C-210ENST00000553571 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
NSFL1C-210ENST00000553571 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
NSFL1C-210ENST00000553571 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
NSFL1C-210ENST00000553571 FBLN2P98095 1184 aa17.95■□□□□ 0.46
NSFL1C-210ENST00000553571 TOP2BQ02880 1626 aa17.93■□□□□ 0.46
NSFL1C-210ENST00000553571 SUPT5HO00267 1087 aaKnown RBP17.9■□□□□ 0.46
NSFL1C-210ENST00000553571 CHMP7Q8WUX9 453 aaPredicted RBP17.89■□□□□ 0.45
NSFL1C-210ENST00000553571 CYB5RLQ6IPT4 315 aa17.87■□□□□ 0.45
NSFL1C-210ENST00000553571 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
NSFL1C-210ENST00000553571 ADAMTS12P58397 1594 aa17.84■□□□□ 0.45
NSFL1C-210ENST00000553571 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
NSFL1C-210ENST00000553571 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
NSFL1C-210ENST00000553571 NUP160Q12769 1436 aa17.75■□□□□ 0.43
NSFL1C-210ENST00000553571 SHROOM2Q13796 1616 aa17.75■□□□□ 0.43
NSFL1C-210ENST00000553571 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
NSFL1C-210ENST00000553571 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
NSFL1C-210ENST00000553571 TRHP20396 242 aaPredicted RBP17.64■□□□□ 0.41
NSFL1C-210ENST00000553571 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
NSFL1C-210ENST00000553571 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
NSFL1C-210ENST00000553571 CUL7Q14999 1698 aa17.59■□□□□ 0.41
NSFL1C-210ENST00000553571 KIF27Q86VH2 1401 aa17.5■□□□□ 0.39
NSFL1C-210ENST00000553571 KIF13AQ9H1H9 1805 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms