RNA–Protein interactions for RNA: ENST00000553566.5

GMFB-203, Transcript of glia maturation factor beta, humanhuman

TSL 5

Gene GMFB, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMFB-203ENST00000553566 NISCHQ9Y2I1 1504 aa59.92■■■■■ 7.18
GMFB-203ENST00000553566 CCDC180Q9P1Z9 1646 aa53.6■■■■■ 6.17
GMFB-203ENST00000553566 ABCC9O60706 1549 aa52.93■■■■■ 6.06
GMFB-203ENST00000553566 RB1CC1Q8TDY2 1594 aa50.64■■■■■ 5.7
GMFB-203ENST00000553566 NACADO15069 1562 aa50.38■■■■■ 5.66
GMFB-203ENST00000553566 DCAF8L2P0C7V8 631 aa50.18■■■■■ 5.62
GMFB-203ENST00000553566 ZCCHC6Q5VYS8 1495 aaKnown RBP49.87■■■■■ 5.57
GMFB-203ENST00000553566 MYO15BQ96JP2 1530 aa49.84■■■■■ 5.57
GMFB-203ENST00000553566 UNC13AQ9UPW8 1703 aa49.71■■■■■ 5.55
GMFB-203ENST00000553566 DCAF1Q9Y4B6 1507 aa49.48■■■■■ 5.51
GMFB-203ENST00000553566 PABPN1Q86U42 306 aaKnown RBP eCLIP49.27■■■■■ 5.48
GMFB-203ENST00000553566 BICRAQ9NZM4 1560 aa49.2■■■■■ 5.47
GMFB-203ENST00000553566 SCRIBQ14160 1630 aa48.96■■■■■ 5.43
GMFB-203ENST00000553566 DNAJC5BQ9UF47 199 aa48.93■■■■■ 5.42
GMFB-203ENST00000553566 SHROOM4Q9ULL8 1493 aa48.46■■■■■ 5.35
GMFB-203ENST00000553566 EIF4G1Q04637 1599 aaKnown RBP47.92■■■■■ 5.26
GMFB-203ENST00000553566 CC2D2AQ9P2K1 1620 aa47.88■■■■■ 5.25
GMFB-203ENST00000553566 CECR2Q9BXF3 1484 aa47.55■■■■■ 5.2
GMFB-203ENST00000553566 SMARCA4P51532 1647 aa46.71■■■■■ 5.07
GMFB-203ENST00000553566 BAZ1AQ9NRL2 1556 aaPredicted RBP46.49■■■■■ 5.03
GMFB-203ENST00000553566 ATAD2BQ9ULI0 1458 aa46.46■■■■■ 5.03
GMFB-203ENST00000553566 NCAPD3P42695 1498 aa46.44■■■■■ 5.02
GMFB-203ENST00000553566 SMARCA2P51531 1590 aa46.39■■■■■ 5.02
GMFB-203ENST00000553566 HMGXB3Q12766 1538 aa46.29■■■■■ 5
GMFB-203ENST00000553566 MROH2BQ7Z745 1585 aa46.25■■■■■ 4.99
GMFB-203ENST00000553566 PEG3Q9GZU2 1588 aa46.16■■■■■ 4.98
GMFB-203ENST00000553566 BAZ1BQ9UIG0 1483 aaKnown RBP46.1■■■■■ 4.97
GMFB-203ENST00000553566 WIZO95785 1651 aa45.81■■■■■ 4.92
GMFB-203ENST00000553566 NESP48681 1621 aa45.69■■■■■ 4.9
GMFB-203ENST00000553566 ERCC6Q03468 1493 aa45.61■■■■■ 4.89
GMFB-203ENST00000553566 RSF1Q96T23 1441 aaPredicted RBP45.43■■■■■ 4.86
GMFB-203ENST00000553566 LAMC3Q9Y6N6 1575 aa45.41■■■■■ 4.86
GMFB-203ENST00000553566 CUX2O14529 1486 aa45.26■■■■■ 4.84
GMFB-203ENST00000553566 KIF21AQ7Z4S6 1674 aa45.24■■■■■ 4.83
GMFB-203ENST00000553566 TOP2AP11388 1531 aaKnown RBP45.21■■■■■ 4.83
GMFB-203ENST00000553566 THOC2Q8NI27 1593 aaKnown RBP45.17■■■■■ 4.82
GMFB-203ENST00000553566 CADPSQ9ULU8 1353 aa45.06■■■■■ 4.8
GMFB-203ENST00000553566 PDS5BQ9NTI5 1447 aa45■■■■■ 4.79
GMFB-203ENST00000553566 CFTRP13569 1480 aa44.73■■■■■ 4.75
GMFB-203ENST00000553566 MRC2Q9UBG0 1479 aa44.7■■■■■ 4.75
GMFB-203ENST00000553566 CEP164Q9UPV0 1460 aa44.66■■■■■ 4.74
GMFB-203ENST00000553566 FANCD2Q9BXW9 1451 aa44.65■■■■■ 4.74
GMFB-203ENST00000553566 PRDM2Q13029 1718 aa44.61■■■■■ 4.73
GMFB-203ENST00000553566 WDR62O43379 1518 aa44.6■■■■■ 4.73
GMFB-203ENST00000553566 CCDC88BA6NC98 1476 aa44.59■■■■■ 4.73
GMFB-203ENST00000553566 DNAJC5Q9H3Z4 198 aa44.34■■■■■ 4.69
GMFB-203ENST00000553566 URB2Q14146 1524 aaKnown RBP44.29■■■■■ 4.68
GMFB-203ENST00000553566 TOPBP1Q92547 1522 aa43.9■■■■■ 4.62
GMFB-203ENST00000553566 SUPT5HO00267 1087 aaKnown RBP43.88■■■■■ 4.62
GMFB-203ENST00000553566 DNMBPQ6XZF7 1577 aa43.84■■■■■ 4.61
GMFB-203ENST00000553566 ABCC8Q09428 1581 aa43.7■■■■■ 4.59
GMFB-203ENST00000553566 IFT140Q96RY7 1462 aa43.68■■■■■ 4.58
GMFB-203ENST00000553566 ZNF608Q9ULD9 1512 aaPredicted RBP43.64■■■■■ 4.58
GMFB-203ENST00000553566 EIF4G3O43432 1585 aaKnown RBP43.54■■■■■ 4.56
GMFB-203ENST00000553566 TARBP1Q13395 1621 aaKnown RBP43.51■■■■■ 4.56
GMFB-203ENST00000553566 POLA1P09884 1462 aaPredicted RBP43.5■■■■■ 4.55
GMFB-203ENST00000553566 CUX1P39880 1505 aa43.43■■■■■ 4.54
GMFB-203ENST00000553566 FGD5Q6ZNL6 1462 aa43.34■■■■■ 4.53
GMFB-203ENST00000553566 RAD54L2Q9Y4B4 1467 aa43.33■■■■■ 4.53
GMFB-203ENST00000553566 AQRO60306 1485 aaKnown RBP eCLIP43.25■■■■■ 4.512e-10■■■■□ 22.5
GMFB-203ENST00000553566 SOGA1O94964 1423 aa43.2■■■■■ 4.51
GMFB-203ENST00000553566 WDR97A6NE52 1622 aa43.15■■■■■ 4.5
GMFB-203ENST00000553566 OSCARQ8IYS5 282 aa43.14■■■■■ 4.5
GMFB-203ENST00000553566 CHD1O14646 1710 aa43.14■■■■■ 4.5
GMFB-203ENST00000553566 TDRD9Q8NDG6 1382 aaKnown RBP43.07■■■■■ 4.49
GMFB-203ENST00000553566 BIVM-ERCC5R4GMW8 1640 aa42.96■■■■■ 4.47
GMFB-203ENST00000553566 SYNJ1O43426 1573 aa42.95■■■■■ 4.47
GMFB-203ENST00000553566 SNAPC4Q5SXM2 1469 aa42.93■■■■■ 4.46
GMFB-203ENST00000553566 PBRM1Q86U86 1689 aa42.92■■■■■ 4.46
GMFB-203ENST00000553566 TOP2BQ02880 1626 aa42.89■■■■■ 4.46
GMFB-203ENST00000553566 WRNQ14191 1432 aaPredicted RBP eCLIP42.86■■■■■ 4.45
GMFB-203ENST00000553566 ABCA5Q8WWZ7 1642 aa42.83■■■■■ 4.45
GMFB-203ENST00000553566 RIMBP3CA6NJZ7 1639 aa42.82■■■■■ 4.45
GMFB-203ENST00000553566 RIMBP3BA6NNM3 1639 aa42.82■■■■■ 4.45
GMFB-203ENST00000553566 RIMBP3Q9UFD9 1639 aa42.82■■■■■ 4.45
GMFB-203ENST00000553566 ABCA10Q8WWZ4 1543 aa42.82■■■■■ 4.45
GMFB-203ENST00000553566 TRIM41Q8WV44 630 aa42.81■■■■■ 4.44
GMFB-203ENST00000553566 GRIN2BQ13224 1484 aa42.8■■■■■ 4.44
GMFB-203ENST00000553566 FBLN2P98095 1184 aa42.77■■■■■ 4.44
GMFB-203ENST00000553566 GAPVD1Q14C86 1478 aa42.74■■■■■ 4.43
GMFB-203ENST00000553566 MAGI1Q96QZ7 1491 aaPredicted RBP42.74■■■■■ 4.43
GMFB-203ENST00000553566 ARHGEF11O15085 1522 aa42.69■■■■■ 4.42
GMFB-203ENST00000553566 SYNJ2O15056 1496 aa42.6■■■■■ 4.41
GMFB-203ENST00000553566 CLASP1Q7Z460 1538 aa42.54■■■■■ 4.4
GMFB-203ENST00000553566 CHMP7Q8WUX9 453 aaPredicted RBP42.5■■■■■ 4.39
GMFB-203ENST00000553566 ADAMTS12P58397 1594 aa42.48■■■■■ 4.39
GMFB-203ENST00000553566 ARAP1Q96P48 1450 aa42.33■■■■■ 4.37
GMFB-203ENST00000553566 ERICH3Q5RHP9 1530 aa42.3■■■■■ 4.36
GMFB-203ENST00000553566 GRIN2AQ12879 1464 aa42.3■■■■■ 4.36
GMFB-203ENST00000553566 CEP170Q5SW79 1584 aa42.22■■■■■ 4.35
GMFB-203ENST00000553566 FHAD1B1AJZ9 1412 aa42.2■■■■■ 4.35
GMFB-203ENST00000553566 CYB5RLQ6IPT4 315 aa42.16■■■■■ 4.34
GMFB-203ENST00000553566 NUP160Q12769 1436 aa42.1■■■■■ 4.33
GMFB-203ENST00000553566 ERCC6L2Q5T890 1561 aa41.98■■■■■ 4.31
GMFB-203ENST00000553566 KIF27Q86VH2 1401 aa41.95■■■■■ 4.31
GMFB-203ENST00000553566 SHROOM2Q13796 1616 aa41.94■■■■■ 4.3
GMFB-203ENST00000553566 CUL7Q14999 1698 aa41.91■■■■■ 4.3
GMFB-203ENST00000553566 RUSC2Q8N2Y8 1516 aa41.89■■■■■ 4.3
GMFB-203ENST00000553566 IGF1RP08069 1367 aa41.8■■■■■ 4.28
GMFB-203ENST00000553566 PRG4Q92954 1404 aaPredicted RBP41.61■■■■■ 4.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms