RNA–Protein interactions for RNA: ENST00000553507.1

AF111169.4-202, humanhuman

TSL 3 BASIC

Gene AF111169.4, Length 262 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.4-202ENST00000553507 NISCHQ9Y2I1 1504 aa9.93□□□□□ -0.82
AF111169.4-202ENST00000553507 ABCC9O60706 1549 aa9.39□□□□□ -0.91
AF111169.4-202ENST00000553507 DNAJC5BQ9UF47 199 aa9.15□□□□□ -0.94
AF111169.4-202ENST00000553507 CCDC180Q9P1Z9 1646 aa8.88□□□□□ -0.99
AF111169.4-202ENST00000553507 PABPN1Q86U42 306 aaKnown RBP eCLIP8.79□□□□□ -1
AF111169.4-202ENST00000553507 DCAF8L2P0C7V8 631 aa8.7□□□□□ -1.02
AF111169.4-202ENST00000553507 RB1CC1Q8TDY2 1594 aa8.65□□□□□ -1.03
AF111169.4-202ENST00000553507 NACADO15069 1562 aa8.52□□□□□ -1.05
AF111169.4-202ENST00000553507 BICRAQ9NZM4 1560 aa8.5□□□□□ -1.05
AF111169.4-202ENST00000553507 UNC13AQ9UPW8 1703 aa8.47□□□□□ -1.05
AF111169.4-202ENST00000553507 DNAJC5Q9H3Z4 198 aa8.46□□□□□ -1.06
AF111169.4-202ENST00000553507 CECR2Q9BXF3 1484 aa8.42□□□□□ -1.06
AF111169.4-202ENST00000553507 CC2D2AQ9P2K1 1620 aa8.38□□□□□ -1.07
AF111169.4-202ENST00000553507 EIF4G1Q04637 1599 aaKnown RBP8.28□□□□□ -1.08
AF111169.4-202ENST00000553507 SCRIBQ14160 1630 aa8.26□□□□□ -1.09
AF111169.4-202ENST00000553507 MYO15BQ96JP2 1530 aa8.24□□□□□ -1.09
AF111169.4-202ENST00000553507 ZCCHC6Q5VYS8 1495 aaKnown RBP8.15□□□□□ -1.1
AF111169.4-202ENST00000553507 SHROOM4Q9ULL8 1493 aa8.14□□□□□ -1.11
AF111169.4-202ENST00000553507 TRIM41Q8WV44 630 aa8.08□□□□□ -1.12
AF111169.4-202ENST00000553507 DCAF1Q9Y4B6 1507 aa8.08□□□□□ -1.12
AF111169.4-202ENST00000553507 ERCC6Q03468 1493 aa8.05□□□□□ -1.12
AF111169.4-202ENST00000553507 CUX2O14529 1486 aa8.03□□□□□ -1.12
AF111169.4-202ENST00000553507 NESP48681 1621 aa8.01□□□□□ -1.13
AF111169.4-202ENST00000553507 NCAPD3P42695 1498 aa7.93□□□□□ -1.14
AF111169.4-202ENST00000553507 ATAD2BQ9ULI0 1458 aa7.9□□□□□ -1.14
AF111169.4-202ENST00000553507 SMARCA2P51531 1590 aa7.85□□□□□ -1.15
AF111169.4-202ENST00000553507 THOC2Q8NI27 1593 aaKnown RBP7.84□□□□□ -1.15
AF111169.4-202ENST00000553507 BAZ1BQ9UIG0 1483 aaKnown RBP7.79□□□□□ -1.16
AF111169.4-202ENST00000553507 SMARCA4P51532 1647 aa7.78□□□□□ -1.16
AF111169.4-202ENST00000553507 KIF21AQ7Z4S6 1674 aa7.77□□□□□ -1.17
AF111169.4-202ENST00000553507 HMGXB3Q12766 1538 aa7.77□□□□□ -1.17
AF111169.4-202ENST00000553507 PDS5BQ9NTI5 1447 aa7.73□□□□□ -1.17
AF111169.4-202ENST00000553507 OSCARQ8IYS5 282 aa7.73□□□□□ -1.17
AF111169.4-202ENST00000553507 MROH2BQ7Z745 1585 aa7.72□□□□□ -1.17
AF111169.4-202ENST00000553507 LAMC3Q9Y6N6 1575 aa7.72□□□□□ -1.17
AF111169.4-202ENST00000553507 MRC2Q9UBG0 1479 aa7.7□□□□□ -1.18
AF111169.4-202ENST00000553507 CADPSQ9ULU8 1353 aa7.7□□□□□ -1.18
AF111169.4-202ENST00000553507 BAZ1AQ9NRL2 1556 aaPredicted RBP7.69□□□□□ -1.18
AF111169.4-202ENST00000553507 WDR62O43379 1518 aa7.67□□□□□ -1.18
AF111169.4-202ENST00000553507 CYB5RLQ6IPT4 315 aa7.66□□□□□ -1.18
AF111169.4-202ENST00000553507 PEG3Q9GZU2 1588 aa7.64□□□□□ -1.19
AF111169.4-202ENST00000553507 TRHP20396 242 aaPredicted RBP7.64□□□□□ -1.19
AF111169.4-202ENST00000553507 RIMBP3CA6NJZ7 1639 aa7.63□□□□□ -1.19
AF111169.4-202ENST00000553507 RIMBP3BA6NNM3 1639 aa7.63□□□□□ -1.19
AF111169.4-202ENST00000553507 RIMBP3Q9UFD9 1639 aa7.63□□□□□ -1.19
AF111169.4-202ENST00000553507 FANCD2Q9BXW9 1451 aa7.62□□□□□ -1.19
AF111169.4-202ENST00000553507 CEP164Q9UPV0 1460 aa7.62□□□□□ -1.19
AF111169.4-202ENST00000553507 URB2Q14146 1524 aaKnown RBP7.6□□□□□ -1.19
AF111169.4-202ENST00000553507 WIZO95785 1651 aa7.6□□□□□ -1.19
AF111169.4-202ENST00000553507 ZNF608Q9ULD9 1512 aaPredicted RBP7.59□□□□□ -1.19
AF111169.4-202ENST00000553507 ARHGEF11O15085 1522 aa7.58□□□□□ -1.2
AF111169.4-202ENST00000553507 AEBP2Q6ZN18 517 aaPredicted RBP7.56□□□□□ -1.2
AF111169.4-202ENST00000553507 FBLN2P98095 1184 aa7.54□□□□□ -1.2
AF111169.4-202ENST00000553507 CFTRP13569 1480 aa7.54□□□□□ -1.2
AF111169.4-202ENST00000553507 ARAP1Q96P48 1450 aa7.51□□□□□ -1.21
AF111169.4-202ENST00000553507 AQRO60306 1485 aaKnown RBP eCLIP7.49□□□□□ -1.21
AF111169.4-202ENST00000553507 RSF1Q96T23 1441 aaPredicted RBP7.46□□□□□ -1.21
AF111169.4-202ENST00000553507 IFT140Q96RY7 1462 aa7.46□□□□□ -1.22
AF111169.4-202ENST00000553507 TOPBP1Q92547 1522 aa7.44□□□□□ -1.22
AF111169.4-202ENST00000553507 EIF4G3O43432 1585 aaKnown RBP7.43□□□□□ -1.22
AF111169.4-202ENST00000553507 TDRD9Q8NDG6 1382 aaKnown RBP7.43□□□□□ -1.22
AF111169.4-202ENST00000553507 CHD1O14646 1710 aa7.42□□□□□ -1.22
AF111169.4-202ENST00000553507 RAD54L2Q9Y4B4 1467 aa7.42□□□□□ -1.22
AF111169.4-202ENST00000553507 CCDC88BA6NC98 1476 aa7.41□□□□□ -1.22
AF111169.4-202ENST00000553507 TOP2AP11388 1531 aaKnown RBP7.41□□□□□ -1.22
AF111169.4-202ENST00000553507 CHMP7Q8WUX9 453 aaPredicted RBP7.37□□□□□ -1.23
AF111169.4-202ENST00000553507 TARBP1Q13395 1621 aaKnown RBP7.37□□□□□ -1.23
AF111169.4-202ENST00000553507 POLA1P09884 1462 aaPredicted RBP7.36□□□□□ -1.23
AF111169.4-202ENST00000553507 SNAPC4Q5SXM2 1469 aa7.36□□□□□ -1.23
AF111169.4-202ENST00000553507 SOGA1O94964 1423 aa7.35□□□□□ -1.23
AF111169.4-202ENST00000553507 DNMBPQ6XZF7 1577 aa7.33□□□□□ -1.24
AF111169.4-202ENST00000553507 CLASP1Q7Z460 1538 aa7.33□□□□□ -1.24
AF111169.4-202ENST00000553507 ILDR1Q86SU0 546 aaPredicted RBP7.33□□□□□ -1.24
AF111169.4-202ENST00000553507 ERCC6L2Q5T890 1561 aa7.32□□□□□ -1.24
AF111169.4-202ENST00000553507 GAPVD1Q14C86 1478 aa7.31□□□□□ -1.24
AF111169.4-202ENST00000553507 ABCC8Q09428 1581 aa7.29□□□□□ -1.24
AF111169.4-202ENST00000553507 PRDM2Q13029 1718 aa7.29□□□□□ -1.24
AF111169.4-202ENST00000553507 FGD5Q6ZNL6 1462 aa7.29□□□□□ -1.24
AF111169.4-202ENST00000553507 KDM4FA0A1W2PPD8 638 aa7.28□□□□□ -1.24
AF111169.4-202ENST00000553507 SYNJ1O43426 1573 aa7.26□□□□□ -1.25
AF111169.4-202ENST00000553507 SYNJ2O15056 1496 aa7.25□□□□□ -1.25
AF111169.4-202ENST00000553507 GRIN2BQ13224 1484 aa7.25□□□□□ -1.25
AF111169.4-202ENST00000553507 CUX1P39880 1505 aa7.25□□□□□ -1.25
AF111169.4-202ENST00000553507 MAGI1Q96QZ7 1491 aaPredicted RBP7.24□□□□□ -1.25
AF111169.4-202ENST00000553507 FAM69CQ0P6D2 419 aa7.22□□□□□ -1.25
AF111169.4-202ENST00000553507 CEP170Q5SW79 1584 aa7.19□□□□□ -1.26
AF111169.4-202ENST00000553507 GRIN2AQ12879 1464 aa7.17□□□□□ -1.26
AF111169.4-202ENST00000553507 KIF13AQ9H1H9 1805 aa7.16□□□□□ -1.26
AF111169.4-202ENST00000553507 TTBK1Q5TCY1 1321 aaPredicted RBP7.16□□□□□ -1.26
AF111169.4-202ENST00000553507 PRG4Q92954 1404 aaPredicted RBP7.16□□□□□ -1.26
AF111169.4-202ENST00000553507 PBRM1Q86U86 1689 aa7.16□□□□□ -1.26
AF111169.4-202ENST00000553507 JPH4Q96JJ6 628 aa7.15□□□□□ -1.26
AF111169.4-202ENST00000553507 NUP160Q12769 1436 aa7.15□□□□□ -1.27
AF111169.4-202ENST00000553507 WDR97A6NE52 1622 aa7.15□□□□□ -1.27
AF111169.4-202ENST00000553507 ABCA5Q8WWZ7 1642 aa7.13□□□□□ -1.27
AF111169.4-202ENST00000553507 ABCA10Q8WWZ4 1543 aa7.13□□□□□ -1.27
AF111169.4-202ENST00000553507 ABCC10Q5T3U5 1492 aa7.12□□□□□ -1.27
AF111169.4-202ENST00000553507 NPM1P06748 294 aaKnown RBP eCLIP7.12□□□□□ -1.27
AF111169.4-202ENST00000553507 ADAMTS12P58397 1594 aa7.11□□□□□ -1.27
AF111169.4-202ENST00000553507 SHROOM2Q13796 1616 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms