RNA–Protein interactions for RNA: ENST00000553494.5

PRC1-205, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 3

Gene PRC1, Length 717 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-205ENST00000553494 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
PRC1-205ENST00000553494 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.65
PRC1-205ENST00000553494 ABCC9O60706 1549 aa30.83■■■□□ 2.53
PRC1-205ENST00000553494 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
PRC1-205ENST00000553494 RB1CC1Q8TDY2 1594 aa29.78■■■□□ 2.36
PRC1-205ENST00000553494 NACADO15069 1562 aa29.77■■■□□ 2.36
PRC1-205ENST00000553494 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
PRC1-205ENST00000553494 MYO15BQ96JP2 1530 aa29.64■■■□□ 2.34
PRC1-205ENST00000553494 DCAF1Q9Y4B6 1507 aa29.53■■■□□ 2.32
PRC1-205ENST00000553494 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
PRC1-205ENST00000553494 PABPN1Q86U42 306 aaKnown RBP eCLIP28.84■■■□□ 2.21
PRC1-205ENST00000553494 SCRIBQ14160 1630 aa28.83■■■□□ 2.21
PRC1-205ENST00000553494 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
PRC1-205ENST00000553494 SHROOM4Q9ULL8 1493 aa28.65■■■□□ 2.18
PRC1-205ENST00000553494 DNAJC5BQ9UF47 199 aa28.46■■■□□ 2.15
PRC1-205ENST00000553494 EIF4G1Q04637 1599 aaKnown RBP28.05■■■□□ 2.08
PRC1-205ENST00000553494 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
PRC1-205ENST00000553494 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
PRC1-205ENST00000553494 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
PRC1-205ENST00000553494 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
PRC1-205ENST00000553494 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
PRC1-205ENST00000553494 NCAPD3P42695 1498 aa27.45■■□□□ 1.99
PRC1-205ENST00000553494 ATAD2BQ9ULI0 1458 aa27.45■■□□□ 1.99
PRC1-205ENST00000553494 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
PRC1-205ENST00000553494 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
PRC1-205ENST00000553494 HMGXB3Q12766 1538 aa27.32■■□□□ 1.96
PRC1-205ENST00000553494 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
PRC1-205ENST00000553494 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
PRC1-205ENST00000553494 WIZO95785 1651 aa27.09■■□□□ 1.93
PRC1-205ENST00000553494 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.89
PRC1-205ENST00000553494 LAMC3Q9Y6N6 1575 aa26.72■■□□□ 1.87
PRC1-205ENST00000553494 CADPSQ9ULU8 1353 aa26.69■■□□□ 1.86
PRC1-205ENST00000553494 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
PRC1-205ENST00000553494 NESP48681 1621 aa26.66■■□□□ 1.86
PRC1-205ENST00000553494 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
PRC1-205ENST00000553494 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
PRC1-205ENST00000553494 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
PRC1-205ENST00000553494 CFTRP13569 1480 aa26.51■■□□□ 1.83
PRC1-205ENST00000553494 CUX2O14529 1486 aa26.44■■□□□ 1.82
PRC1-205ENST00000553494 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
PRC1-205ENST00000553494 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
PRC1-205ENST00000553494 CEP164Q9UPV0 1460 aa26.33■■□□□ 1.81
PRC1-205ENST00000553494 MRC2Q9UBG0 1479 aa26.26■■□□□ 1.79
PRC1-205ENST00000553494 PRDM2Q13029 1718 aa26.25■■□□□ 1.79
PRC1-205ENST00000553494 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
PRC1-205ENST00000553494 WDR62O43379 1518 aa26.14■■□□□ 1.77
PRC1-205ENST00000553494 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
PRC1-205ENST00000553494 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
PRC1-205ENST00000553494 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
PRC1-205ENST00000553494 TOPBP1Q92547 1522 aa25.91■■□□□ 1.74
PRC1-205ENST00000553494 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
PRC1-205ENST00000553494 IFT140Q96RY7 1462 aa25.79■■□□□ 1.72
PRC1-205ENST00000553494 CUX1P39880 1505 aa25.71■■□□□ 1.71
PRC1-205ENST00000553494 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
PRC1-205ENST00000553494 WRNQ14191 1432 aaPredicted RBP eCLIP25.67■■□□□ 1.7
PRC1-205ENST00000553494 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
PRC1-205ENST00000553494 SOGA1O94964 1423 aa25.64■■□□□ 1.7
PRC1-205ENST00000553494 TARBP1Q13395 1621 aaKnown RBP25.57■■□□□ 1.68
PRC1-205ENST00000553494 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
PRC1-205ENST00000553494 RAD54L2Q9Y4B4 1467 aa25.55■■□□□ 1.68
PRC1-205ENST00000553494 ZNF608Q9ULD9 1512 aaPredicted RBP25.55■■□□□ 1.68
PRC1-205ENST00000553494 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
PRC1-205ENST00000553494 WDR97A6NE52 1622 aa25.51■■□□□ 1.67
PRC1-205ENST00000553494 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
PRC1-205ENST00000553494 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
PRC1-205ENST00000553494 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.677e-7■■■■■ 53.2
PRC1-205ENST00000553494 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
PRC1-205ENST00000553494 ABCA10Q8WWZ4 1543 aa25.43■■□□□ 1.66
PRC1-205ENST00000553494 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
PRC1-205ENST00000553494 GAPVD1Q14C86 1478 aa25.34■■□□□ 1.65
PRC1-205ENST00000553494 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
PRC1-205ENST00000553494 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
PRC1-205ENST00000553494 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
PRC1-205ENST00000553494 SNAPC4Q5SXM2 1469 aa25.24■■□□□ 1.63
PRC1-205ENST00000553494 FBLN2P98095 1184 aa25.23■■□□□ 1.63
PRC1-205ENST00000553494 CHMP7Q8WUX9 453 aaPredicted RBP25.21■■□□□ 1.63
PRC1-205ENST00000553494 PBRM1Q86U86 1689 aa25.2■■□□□ 1.62
PRC1-205ENST00000553494 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
PRC1-205ENST00000553494 KIF27Q86VH2 1401 aa25.17■■□□□ 1.62
PRC1-205ENST00000553494 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
PRC1-205ENST00000553494 ERICH3Q5RHP9 1530 aa25.16■■□□□ 1.62
PRC1-205ENST00000553494 CHD1O14646 1710 aa25.1■■□□□ 1.61
PRC1-205ENST00000553494 FHAD1B1AJZ9 1412 aa25.08■■□□□ 1.61
PRC1-205ENST00000553494 ADAMTS12P58397 1594 aa25.03■■□□□ 1.6
PRC1-205ENST00000553494 IGF1RP08069 1367 aa24.99■■□□□ 1.59
PRC1-205ENST00000553494 GRIN2AQ12879 1464 aa24.98■■□□□ 1.59
PRC1-205ENST00000553494 CUL7Q14999 1698 aa24.94■■□□□ 1.58
PRC1-205ENST00000553494 CARMIL1Q5VZK9 1371 aa24.88■■□□□ 1.57
PRC1-205ENST00000553494 CLASP1Q7Z460 1538 aa24.87■■□□□ 1.57
PRC1-205ENST00000553494 NUP160Q12769 1436 aa24.86■■□□□ 1.57
PRC1-205ENST00000553494 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
PRC1-205ENST00000553494 RIMBP3CA6NJZ7 1639 aa24.84■■□□□ 1.57
PRC1-205ENST00000553494 RIMBP3BA6NNM3 1639 aa24.84■■□□□ 1.57
PRC1-205ENST00000553494 RIMBP3Q9UFD9 1639 aa24.84■■□□□ 1.57
PRC1-205ENST00000553494 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
PRC1-205ENST00000553494 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
PRC1-205ENST00000553494 CEP170Q5SW79 1584 aa24.79■■□□□ 1.56
PRC1-205ENST00000553494 EEA1Q15075 1411 aa24.78■■□□□ 1.56
PRC1-205ENST00000553494 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
PRC1-205ENST00000553494 CSRNP3Q8WYN3 585 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms