RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 NISCHQ9Y2I1 1504 aa21.81■■□□□ 1.08
NPC2-204ENST00000553490 ABCC9O60706 1549 aa20.03■□□□□ 0.8
NPC2-204ENST00000553490 CCDC180Q9P1Z9 1646 aa19.79■□□□□ 0.76
NPC2-204ENST00000553490 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
NPC2-204ENST00000553490 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
NPC2-204ENST00000553490 NACADO15069 1562 aa18.72■□□□□ 0.59
NPC2-204ENST00000553490 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
NPC2-204ENST00000553490 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.56
NPC2-204ENST00000553490 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
NPC2-204ENST00000553490 BICRAQ9NZM4 1560 aa18.4■□□□□ 0.54
NPC2-204ENST00000553490 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
NPC2-204ENST00000553490 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
NPC2-204ENST00000553490 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
NPC2-204ENST00000553490 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
NPC2-204ENST00000553490 ZCCHC6Q5VYS8 1495 aaKnown RBP18.06■□□□□ 0.48
NPC2-204ENST00000553490 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.47
NPC2-204ENST00000553490 SCRIBQ14160 1630 aa18■□□□□ 0.47
NPC2-204ENST00000553490 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
NPC2-204ENST00000553490 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
NPC2-204ENST00000553490 CUX2O14529 1486 aa17.41■□□□□ 0.38
NPC2-204ENST00000553490 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
NPC2-204ENST00000553490 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
NPC2-204ENST00000553490 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
NPC2-204ENST00000553490 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
NPC2-204ENST00000553490 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
NPC2-204ENST00000553490 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
NPC2-204ENST00000553490 NESP48681 1621 aa17.11■□□□□ 0.33
NPC2-204ENST00000553490 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
NPC2-204ENST00000553490 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
NPC2-204ENST00000553490 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
NPC2-204ENST00000553490 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
NPC2-204ENST00000553490 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
NPC2-204ENST00000553490 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
NPC2-204ENST00000553490 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
NPC2-204ENST00000553490 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
NPC2-204ENST00000553490 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
NPC2-204ENST00000553490 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
NPC2-204ENST00000553490 WDR62O43379 1518 aa16.74■□□□□ 0.27
NPC2-204ENST00000553490 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
NPC2-204ENST00000553490 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
NPC2-204ENST00000553490 WIZO95785 1651 aa16.61■□□□□ 0.25
NPC2-204ENST00000553490 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
NPC2-204ENST00000553490 CFTRP13569 1480 aa16.48■□□□□ 0.23
NPC2-204ENST00000553490 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
NPC2-204ENST00000553490 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
NPC2-204ENST00000553490 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
NPC2-204ENST00000553490 RIMBP3CA6NJZ7 1639 aa16.4■□□□□ 0.22
NPC2-204ENST00000553490 RIMBP3BA6NNM3 1639 aa16.4■□□□□ 0.22
NPC2-204ENST00000553490 RIMBP3Q9UFD9 1639 aa16.4■□□□□ 0.22
NPC2-204ENST00000553490 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
NPC2-204ENST00000553490 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
NPC2-204ENST00000553490 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
NPC2-204ENST00000553490 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
NPC2-204ENST00000553490 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
NPC2-204ENST00000553490 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
NPC2-204ENST00000553490 TOPBP1Q92547 1522 aa16.22■□□□□ 0.19
NPC2-204ENST00000553490 CHD1O14646 1710 aa16.18■□□□□ 0.18
NPC2-204ENST00000553490 DNMBPQ6XZF7 1577 aa16.16■□□□□ 0.18
NPC2-204ENST00000553490 CCDC88BA6NC98 1476 aa16.15■□□□□ 0.18
NPC2-204ENST00000553490 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
NPC2-204ENST00000553490 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
NPC2-204ENST00000553490 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
NPC2-204ENST00000553490 CYB5RLQ6IPT4 315 aa16.1■□□□□ 0.17
NPC2-204ENST00000553490 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
NPC2-204ENST00000553490 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
NPC2-204ENST00000553490 POLA1P09884 1462 aaPredicted RBP16.03■□□□□ 0.16
NPC2-204ENST00000553490 FBLN2P98095 1184 aa16■□□□□ 0.15
NPC2-204ENST00000553490 CLASP1Q7Z460 1538 aa15.97■□□□□ 0.15
NPC2-204ENST00000553490 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.14
NPC2-204ENST00000553490 RAD54L2Q9Y4B4 1467 aa15.96■□□□□ 0.14
NPC2-204ENST00000553490 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
NPC2-204ENST00000553490 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
NPC2-204ENST00000553490 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
NPC2-204ENST00000553490 SOGA1O94964 1423 aa15.9■□□□□ 0.14
NPC2-204ENST00000553490 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
NPC2-204ENST00000553490 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
NPC2-204ENST00000553490 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
NPC2-204ENST00000553490 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
NPC2-204ENST00000553490 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
NPC2-204ENST00000553490 CUX1P39880 1505 aa15.83■□□□□ 0.12
NPC2-204ENST00000553490 PBRM1Q86U86 1689 aa15.83■□□□□ 0.12
NPC2-204ENST00000553490 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
NPC2-204ENST00000553490 GAPVD1Q14C86 1478 aa15.79■□□□□ 0.12
NPC2-204ENST00000553490 ABCA5Q8WWZ7 1642 aa15.73■□□□□ 0.11
NPC2-204ENST00000553490 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
NPC2-204ENST00000553490 ERCC6L2Q5T890 1561 aa15.67■□□□□ 0.1
NPC2-204ENST00000553490 ADAMTS12P58397 1594 aa15.66■□□□□ 0.1
NPC2-204ENST00000553490 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
NPC2-204ENST00000553490 CEP170Q5SW79 1584 aa15.63■□□□□ 0.09
NPC2-204ENST00000553490 NUP160Q12769 1436 aa15.6■□□□□ 0.09
NPC2-204ENST00000553490 SHROOM2Q13796 1616 aa15.6■□□□□ 0.09
NPC2-204ENST00000553490 KIF13AQ9H1H9 1805 aa15.57■□□□□ 0.08
NPC2-204ENST00000553490 WRNQ14191 1432 aaPredicted RBP eCLIP15.54■□□□□ 0.08
NPC2-204ENST00000553490 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
NPC2-204ENST00000553490 BIVM-ERCC5R4GMW8 1640 aa15.52■□□□□ 0.08
NPC2-204ENST00000553490 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
NPC2-204ENST00000553490 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
NPC2-204ENST00000553490 PRG4Q92954 1404 aaPredicted RBP15.45■□□□□ 0.06
NPC2-204ENST00000553490 RUSC2Q8N2Y8 1516 aa15.45■□□□□ 0.06
NPC2-204ENST00000553490 DIP2BQ9P265 1576 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms