RNA–Protein interactions for RNA: ENST00000553333.1

GMFB-202, Transcript of glia maturation factor beta, humanhuman

TSL 3

Gene GMFB, Length 591 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMFB-202ENST00000553333 AEBP2Q6ZN18 517 aaPredicted RBP28.07■■■□□ 2.08
GMFB-202ENST00000553333 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
GMFB-202ENST00000553333 SENP3Q9H4L4 574 aaPredicted RBP24.06■■□□□ 1.44
GMFB-202ENST00000553333 PHF23Q9BUL5 403 aaPredicted RBP23.69■■□□□ 1.38
GMFB-202ENST00000553333 NISCHQ9Y2I1 1504 aa23.27■■□□□ 1.32
GMFB-202ENST00000553333 FOXD1Q16676 465 aa22.34■■□□□ 1.17
GMFB-202ENST00000553333 ABCC9O60706 1549 aa22.01■■□□□ 1.11
GMFB-202ENST00000553333 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
GMFB-202ENST00000553333 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
GMFB-202ENST00000553333 CCDC180Q9P1Z9 1646 aa21.07■□□□□ 0.96
GMFB-202ENST00000553333 MSH5O43196 834 aa20.99■□□□□ 0.95
GMFB-202ENST00000553333 PIAS4Q8N2W9 510 aaPredicted RBP20.94■□□□□ 0.94
GMFB-202ENST00000553333 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
GMFB-202ENST00000553333 ADRA2BP18089 450 aa20.82■□□□□ 0.92
GMFB-202ENST00000553333 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
GMFB-202ENST00000553333 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
GMFB-202ENST00000553333 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
GMFB-202ENST00000553333 DNAJC5Q9H3Z4 198 aa20.27■□□□□ 0.84
GMFB-202ENST00000553333 NACADO15069 1562 aa20.2■□□□□ 0.82
GMFB-202ENST00000553333 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
GMFB-202ENST00000553333 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
GMFB-202ENST00000553333 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
GMFB-202ENST00000553333 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
GMFB-202ENST00000553333 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
GMFB-202ENST00000553333 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
GMFB-202ENST00000553333 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
GMFB-202ENST00000553333 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
GMFB-202ENST00000553333 CUX2O14529 1486 aa19.25■□□□□ 0.67
GMFB-202ENST00000553333 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
GMFB-202ENST00000553333 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
GMFB-202ENST00000553333 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
GMFB-202ENST00000553333 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
GMFB-202ENST00000553333 MAPK8IP2Q13387 824 aaPredicted RBP19.09■□□□□ 0.65
GMFB-202ENST00000553333 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
GMFB-202ENST00000553333 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
GMFB-202ENST00000553333 ERCC6Q03468 1493 aa19■□□□□ 0.63
GMFB-202ENST00000553333 NCAPD3P42695 1498 aa18.76■□□□□ 0.59
GMFB-202ENST00000553333 PPP4R3CPQ6ZMV5 832 aa18.75■□□□□ 0.59
GMFB-202ENST00000553333 NESP48681 1621 aa18.69■□□□□ 0.58
GMFB-202ENST00000553333 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
GMFB-202ENST00000553333 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
GMFB-202ENST00000553333 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
GMFB-202ENST00000553333 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
GMFB-202ENST00000553333 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
GMFB-202ENST00000553333 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
GMFB-202ENST00000553333 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
GMFB-202ENST00000553333 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
GMFB-202ENST00000553333 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
GMFB-202ENST00000553333 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
GMFB-202ENST00000553333 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
GMFB-202ENST00000553333 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.52
GMFB-202ENST00000553333 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
GMFB-202ENST00000553333 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
GMFB-202ENST00000553333 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
GMFB-202ENST00000553333 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
GMFB-202ENST00000553333 WDR62O43379 1518 aa18.17■□□□□ 0.5
GMFB-202ENST00000553333 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
GMFB-202ENST00000553333 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
GMFB-202ENST00000553333 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
GMFB-202ENST00000553333 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
GMFB-202ENST00000553333 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
GMFB-202ENST00000553333 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
GMFB-202ENST00000553333 TRHP20396 242 aaPredicted RBP17.99■□□□□ 0.47
GMFB-202ENST00000553333 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
GMFB-202ENST00000553333 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
GMFB-202ENST00000553333 ARHGEF11O15085 1522 aa17.96■□□□□ 0.47
GMFB-202ENST00000553333 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
GMFB-202ENST00000553333 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
GMFB-202ENST00000553333 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
GMFB-202ENST00000553333 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
GMFB-202ENST00000553333 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
GMFB-202ENST00000553333 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
GMFB-202ENST00000553333 CFTRP13569 1480 aa17.75■□□□□ 0.43
GMFB-202ENST00000553333 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
GMFB-202ENST00000553333 ZNF608Q9ULD9 1512 aaPredicted RBP17.74■□□□□ 0.43
GMFB-202ENST00000553333 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
GMFB-202ENST00000553333 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
GMFB-202ENST00000553333 WIZO95785 1651 aa17.61■□□□□ 0.41
GMFB-202ENST00000553333 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
GMFB-202ENST00000553333 FBLN2P98095 1184 aa17.53■□□□□ 0.4
GMFB-202ENST00000553333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.45e-8■■■■□ 25.6
GMFB-202ENST00000553333 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.392e-10■■■■□ 22.5
GMFB-202ENST00000553333 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
GMFB-202ENST00000553333 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
GMFB-202ENST00000553333 CHD1O14646 1710 aa17.44■□□□□ 0.38
GMFB-202ENST00000553333 KCNA4P22459 653 aa17.44■□□□□ 0.38
GMFB-202ENST00000553333 ILDR1Q86SU0 546 aaPredicted RBP17.44■□□□□ 0.38
GMFB-202ENST00000553333 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
GMFB-202ENST00000553333 ABCC8Q09428 1581 aa17.34■□□□□ 0.37
GMFB-202ENST00000553333 CLASP1Q7Z460 1538 aa17.34■□□□□ 0.37
GMFB-202ENST00000553333 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
GMFB-202ENST00000553333 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
GMFB-202ENST00000553333 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
GMFB-202ENST00000553333 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
GMFB-202ENST00000553333 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
GMFB-202ENST00000553333 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
GMFB-202ENST00000553333 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
GMFB-202ENST00000553333 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
GMFB-202ENST00000553333 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
GMFB-202ENST00000553333 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms