RNA–Protein interactions for RNA: ENST00000553252.1

SLC38A2-213, Transcript of solute carrier family 38 member 2, humanhuman

TSL 2

Gene SLC38A2, Length 846 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A2-213ENST00000553252 NISCHQ9Y2I1 1504 aa40.12■■■■■ 4.01
SLC38A2-213ENST00000553252 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
SLC38A2-213ENST00000553252 ABCC9O60706 1549 aa33.93■■■■□ 3.02
SLC38A2-213ENST00000553252 ZCCHC6Q5VYS8 1495 aaKnown RBP33.56■■■□□ 2.96
SLC38A2-213ENST00000553252 DCAF8L2P0C7V8 631 aa33.42■■■□□ 2.94
SLC38A2-213ENST00000553252 DCAF1Q9Y4B6 1507 aa33.18■■■□□ 2.9
SLC38A2-213ENST00000553252 NACADO15069 1562 aa33.04■■■□□ 2.88
SLC38A2-213ENST00000553252 MYO15BQ96JP2 1530 aa33.04■■■□□ 2.88
SLC38A2-213ENST00000553252 RB1CC1Q8TDY2 1594 aa32.9■■■□□ 2.86
SLC38A2-213ENST00000553252 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
SLC38A2-213ENST00000553252 SHROOM4Q9ULL8 1493 aa32.28■■■□□ 2.76
SLC38A2-213ENST00000553252 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
SLC38A2-213ENST00000553252 PABPN1Q86U42 306 aaKnown RBP eCLIP31.89■■■□□ 2.7
SLC38A2-213ENST00000553252 BICRAQ9NZM4 1560 aa31.85■■■□□ 2.69
SLC38A2-213ENST00000553252 CECR2Q9BXF3 1484 aa31.2■■■□□ 2.58
SLC38A2-213ENST00000553252 BAZ1AQ9NRL2 1556 aaPredicted RBP31.04■■■□□ 2.56
SLC38A2-213ENST00000553252 EIF4G1Q04637 1599 aaKnown RBP30.97■■■□□ 2.55
SLC38A2-213ENST00000553252 SMARCA4P51532 1647 aa30.96■■■□□ 2.55
SLC38A2-213ENST00000553252 MROH2BQ7Z745 1585 aa30.95■■■□□ 2.54
SLC38A2-213ENST00000553252 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.53
SLC38A2-213ENST00000553252 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
SLC38A2-213ENST00000553252 SUPT5HO00267 1087 aaKnown RBP30.8■■■□□ 2.52
SLC38A2-213ENST00000553252 CC2D2AQ9P2K1 1620 aa30.67■■■□□ 2.5
SLC38A2-213ENST00000553252 WIZO95785 1651 aa30.65■■■□□ 2.5
SLC38A2-213ENST00000553252 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
SLC38A2-213ENST00000553252 SMARCA2P51531 1590 aa30.62■■■□□ 2.49
SLC38A2-213ENST00000553252 PEG3Q9GZU2 1588 aa30.6■■■□□ 2.49
SLC38A2-213ENST00000553252 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
SLC38A2-213ENST00000553252 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
SLC38A2-213ENST00000553252 HMGXB3Q12766 1538 aa30.37■■■□□ 2.45
SLC38A2-213ENST00000553252 TOP2AP11388 1531 aaKnown RBP30.35■■■□□ 2.45
SLC38A2-213ENST00000553252 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
SLC38A2-213ENST00000553252 CADPSQ9ULU8 1353 aa29.68■■■□□ 2.34
SLC38A2-213ENST00000553252 CFTRP13569 1480 aa29.62■■■□□ 2.33
SLC38A2-213ENST00000553252 NESP48681 1621 aa29.56■■■□□ 2.32
SLC38A2-213ENST00000553252 LAMC3Q9Y6N6 1575 aa29.55■■■□□ 2.32
SLC38A2-213ENST00000553252 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
SLC38A2-213ENST00000553252 PDS5BQ9NTI5 1447 aa29.38■■■□□ 2.29
SLC38A2-213ENST00000553252 FANCD2Q9BXW9 1451 aa29.32■■■□□ 2.28
SLC38A2-213ENST00000553252 CEP164Q9UPV0 1460 aa29.22■■■□□ 2.27
SLC38A2-213ENST00000553252 ERCC6Q03468 1493 aa29.19■■■□□ 2.26
SLC38A2-213ENST00000553252 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
SLC38A2-213ENST00000553252 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
SLC38A2-213ENST00000553252 CHIC1Q5VXU3 224 aa29.14■■■□□ 2.26
SLC38A2-213ENST00000553252 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
SLC38A2-213ENST00000553252 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
SLC38A2-213ENST00000553252 MRC2Q9UBG0 1479 aa29.01■■■□□ 2.23
SLC38A2-213ENST00000553252 CUX1P39880 1505 aa28.99■■■□□ 2.23
SLC38A2-213ENST00000553252 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
SLC38A2-213ENST00000553252 SYNJ1O43426 1573 aa28.95■■■□□ 2.22
SLC38A2-213ENST00000553252 DNMBPQ6XZF7 1577 aa28.94■■■□□ 2.22
SLC38A2-213ENST00000553252 TOPBP1Q92547 1522 aa28.93■■■□□ 2.22
SLC38A2-213ENST00000553252 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
SLC38A2-213ENST00000553252 BIVM-ERCC5R4GMW8 1640 aa28.88■■■□□ 2.21
SLC38A2-213ENST00000553252 THOC2Q8NI27 1593 aaKnown RBP28.87■■■□□ 2.21
SLC38A2-213ENST00000553252 WDR62O43379 1518 aa28.85■■■□□ 2.21
SLC38A2-213ENST00000553252 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
SLC38A2-213ENST00000553252 POLA1P09884 1462 aaPredicted RBP28.73■■■□□ 2.19
SLC38A2-213ENST00000553252 SOGA1O94964 1423 aa28.69■■■□□ 2.18
SLC38A2-213ENST00000553252 RAD54L2Q9Y4B4 1467 aa28.64■■■□□ 2.17
SLC38A2-213ENST00000553252 CUX2O14529 1486 aa28.61■■■□□ 2.17
SLC38A2-213ENST00000553252 IFT140Q96RY7 1462 aa28.57■■■□□ 2.16
SLC38A2-213ENST00000553252 ABCA10Q8WWZ4 1543 aa28.52■■■□□ 2.16
SLC38A2-213ENST00000553252 TARBP1Q13395 1621 aaKnown RBP28.51■■■□□ 2.15
SLC38A2-213ENST00000553252 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
SLC38A2-213ENST00000553252 FAM9AQ8IZU1 332 aaPredicted RBP28.45■■■□□ 2.14
SLC38A2-213ENST00000553252 TDRD9Q8NDG6 1382 aaKnown RBP28.44■■■□□ 2.14
SLC38A2-213ENST00000553252 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
SLC38A2-213ENST00000553252 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
SLC38A2-213ENST00000553252 EEA1Q15075 1411 aa28.39■■■□□ 2.14
SLC38A2-213ENST00000553252 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
SLC38A2-213ENST00000553252 AQRO60306 1485 aaKnown RBP eCLIP28.35■■■□□ 2.132e-18■■■■■ 32.3
SLC38A2-213ENST00000553252 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
SLC38A2-213ENST00000553252 CSRNP3Q8WYN3 585 aa28.32■■■□□ 2.12
SLC38A2-213ENST00000553252 ABCA5Q8WWZ7 1642 aa28.3■■■□□ 2.12
SLC38A2-213ENST00000553252 EIF4G3O43432 1585 aaKnown RBP28.26■■■□□ 2.11
SLC38A2-213ENST00000553252 IGF1RP08069 1367 aa28.25■■■□□ 2.11
SLC38A2-213ENST00000553252 GRIN2BQ13224 1484 aa28.22■■■□□ 2.11
SLC38A2-213ENST00000553252 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
SLC38A2-213ENST00000553252 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
SLC38A2-213ENST00000553252 CARMIL1Q5VZK9 1371 aa28.12■■■□□ 2.09
SLC38A2-213ENST00000553252 SNAPC4Q5SXM2 1469 aa28.08■■■□□ 2.09
SLC38A2-213ENST00000553252 CUL7Q14999 1698 aa28.07■■■□□ 2.08
SLC38A2-213ENST00000553252 PRXQ9BXM0 1461 aa28.06■■■□□ 2.08
SLC38A2-213ENST00000553252 EHMT2Q96KQ7 1210 aa28.05■■■□□ 2.08
SLC38A2-213ENST00000553252 MAGI1Q96QZ7 1491 aaPredicted RBP28.05■■■□□ 2.08
SLC38A2-213ENST00000553252 FHAD1B1AJZ9 1412 aa28.03■■■□□ 2.08
SLC38A2-213ENST00000553252 RAPGEF2Q9Y4G8 1499 aa28■■■□□ 2.07
SLC38A2-213ENST00000553252 KIF21BO75037 1637 aa28■■■□□ 2.07
SLC38A2-213ENST00000553252 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
SLC38A2-213ENST00000553252 LOC105371045A0A1W2PR82 267 aa27.99■■■□□ 2.07
SLC38A2-213ENST00000553252 CHMP7Q8WUX9 453 aaPredicted RBP27.97■■■□□ 2.07
SLC38A2-213ENST00000553252 FBLN2P98095 1184 aa27.96■■■□□ 2.07
SLC38A2-213ENST00000553252 GOLGA3Q08378 1498 aa27.95■■■□□ 2.06
SLC38A2-213ENST00000553252 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
SLC38A2-213ENST00000553252 SYNJ2O15056 1496 aa27.94■■■□□ 2.06
SLC38A2-213ENST00000553252 UBTFP17480 764 aaKnown RBP27.92■■■□□ 2.06
SLC38A2-213ENST00000553252 GRIN2AQ12879 1464 aa27.84■■■□□ 2.05
SLC38A2-213ENST00000553252 CHD1O14646 1710 aa27.77■■■□□ 2.04
SLC38A2-213ENST00000553252 TNIKQ9UKE5 1360 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms