RNA–Protein interactions for RNA: ENST00000553204.5

LMBR1L-230, Transcript of limb development membrane protein 1 like, humanhuman

TSL 3

Gene LMBR1L, Length 582 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-230ENST00000553204 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
LMBR1L-230ENST00000553204 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
LMBR1L-230ENST00000553204 ABCC9O60706 1549 aa24.53■■□□□ 1.52
LMBR1L-230ENST00000553204 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
LMBR1L-230ENST00000553204 DCAF8L2P0C7V8 631 aa24.24■■□□□ 1.47
LMBR1L-230ENST00000553204 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
LMBR1L-230ENST00000553204 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
LMBR1L-230ENST00000553204 NACADO15069 1562 aa23.89■■□□□ 1.41
LMBR1L-230ENST00000553204 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.41
LMBR1L-230ENST00000553204 RB1CC1Q8TDY2 1594 aa23.79■■□□□ 1.4
LMBR1L-230ENST00000553204 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
LMBR1L-230ENST00000553204 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
LMBR1L-230ENST00000553204 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
LMBR1L-230ENST00000553204 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
LMBR1L-230ENST00000553204 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
LMBR1L-230ENST00000553204 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
LMBR1L-230ENST00000553204 CECR2Q9BXF3 1484 aa22.52■■□□□ 1.2
LMBR1L-230ENST00000553204 BAZ1AQ9NRL2 1556 aaPredicted RBP22.42■■□□□ 1.18
LMBR1L-230ENST00000553204 EIF4G1Q04637 1599 aaKnown RBP22.37■■□□□ 1.17
LMBR1L-230ENST00000553204 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.16
LMBR1L-230ENST00000553204 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
LMBR1L-230ENST00000553204 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
LMBR1L-230ENST00000553204 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
LMBR1L-230ENST00000553204 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
LMBR1L-230ENST00000553204 ATAD2BQ9ULI0 1458 aa22.14■■□□□ 1.13
LMBR1L-230ENST00000553204 SMARCA2P51531 1590 aa22.13■■□□□ 1.13
LMBR1L-230ENST00000553204 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
LMBR1L-230ENST00000553204 WIZO95785 1651 aa22.1■■□□□ 1.13
LMBR1L-230ENST00000553204 PEG3Q9GZU2 1588 aa22.09■■□□□ 1.13
LMBR1L-230ENST00000553204 NCAPD3P42695 1498 aa22.06■■□□□ 1.12
LMBR1L-230ENST00000553204 BAZ1BQ9UIG0 1483 aaKnown RBP21.99■■□□□ 1.11
LMBR1L-230ENST00000553204 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
LMBR1L-230ENST00000553204 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
LMBR1L-230ENST00000553204 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
LMBR1L-230ENST00000553204 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
LMBR1L-230ENST00000553204 CFTRP13569 1480 aa21.41■■□□□ 1.02
LMBR1L-230ENST00000553204 LAMC3Q9Y6N6 1575 aa21.36■■□□□ 1.01
LMBR1L-230ENST00000553204 NESP48681 1621 aa21.34■■□□□ 1.01
LMBR1L-230ENST00000553204 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
LMBR1L-230ENST00000553204 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
LMBR1L-230ENST00000553204 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
LMBR1L-230ENST00000553204 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
LMBR1L-230ENST00000553204 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
LMBR1L-230ENST00000553204 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
LMBR1L-230ENST00000553204 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
LMBR1L-230ENST00000553204 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.96
LMBR1L-230ENST00000553204 ABCC8Q09428 1581 aa21■□□□□ 0.95
LMBR1L-230ENST00000553204 MRC2Q9UBG0 1479 aa20.97■□□□□ 0.95
LMBR1L-230ENST00000553204 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
LMBR1L-230ENST00000553204 CUX1P39880 1505 aa20.92■□□□□ 0.94
LMBR1L-230ENST00000553204 URB2Q14146 1524 aaKnown RBP20.92■□□□□ 0.94
LMBR1L-230ENST00000553204 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
LMBR1L-230ENST00000553204 TOPBP1Q92547 1522 aa20.89■□□□□ 0.94
LMBR1L-230ENST00000553204 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
LMBR1L-230ENST00000553204 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
LMBR1L-230ENST00000553204 WDR62O43379 1518 aa20.83■□□□□ 0.92
LMBR1L-230ENST00000553204 THOC2Q8NI27 1593 aaKnown RBP20.82■□□□□ 0.92
LMBR1L-230ENST00000553204 BIVM-ERCC5R4GMW8 1640 aa20.82■□□□□ 0.92
LMBR1L-230ENST00000553204 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
LMBR1L-230ENST00000553204 SOGA1O94964 1423 aa20.76■□□□□ 0.91
LMBR1L-230ENST00000553204 POLA1P09884 1462 aaPredicted RBP20.74■□□□□ 0.91
LMBR1L-230ENST00000553204 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
LMBR1L-230ENST00000553204 CUX2O14529 1486 aa20.67■□□□□ 0.9
LMBR1L-230ENST00000553204 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
LMBR1L-230ENST00000553204 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
LMBR1L-230ENST00000553204 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
LMBR1L-230ENST00000553204 TARBP1Q13395 1621 aaKnown RBP20.58■□□□□ 0.89
LMBR1L-230ENST00000553204 KIF27Q86VH2 1401 aa20.58■□□□□ 0.88
LMBR1L-230ENST00000553204 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
LMBR1L-230ENST00000553204 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
LMBR1L-230ENST00000553204 EEA1Q15075 1411 aa20.52■□□□□ 0.87
LMBR1L-230ENST00000553204 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.879e-22■■■■■ 84.2
LMBR1L-230ENST00000553204 ZNF608Q9ULD9 1512 aaPredicted RBP20.5■□□□□ 0.87
LMBR1L-230ENST00000553204 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
LMBR1L-230ENST00000553204 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
LMBR1L-230ENST00000553204 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
LMBR1L-230ENST00000553204 WDR97A6NE52 1622 aa20.46■□□□□ 0.87
LMBR1L-230ENST00000553204 IGF1RP08069 1367 aa20.45■□□□□ 0.86
LMBR1L-230ENST00000553204 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
LMBR1L-230ENST00000553204 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
LMBR1L-230ENST00000553204 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
LMBR1L-230ENST00000553204 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
LMBR1L-230ENST00000553204 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
LMBR1L-230ENST00000553204 PBRM1Q86U86 1689 aa20.31■□□□□ 0.84
LMBR1L-230ENST00000553204 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
LMBR1L-230ENST00000553204 FBLN2P98095 1184 aa20.28■□□□□ 0.84
LMBR1L-230ENST00000553204 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
LMBR1L-230ENST00000553204 MAGI1Q96QZ7 1491 aaPredicted RBP20.28■□□□□ 0.84
LMBR1L-230ENST00000553204 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
LMBR1L-230ENST00000553204 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
LMBR1L-230ENST00000553204 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
LMBR1L-230ENST00000553204 CUL7Q14999 1698 aa20.25■□□□□ 0.83
LMBR1L-230ENST00000553204 RAPGEF2Q9Y4G8 1499 aa20.24■□□□□ 0.83
LMBR1L-230ENST00000553204 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
LMBR1L-230ENST00000553204 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
LMBR1L-230ENST00000553204 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
LMBR1L-230ENST00000553204 ADAMTS12P58397 1594 aa20.18■□□□□ 0.82
LMBR1L-230ENST00000553204 KIF21BO75037 1637 aa20.17■□□□□ 0.82
LMBR1L-230ENST00000553204 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
LMBR1L-230ENST00000553204 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms