RNA–Protein interactions for RNA: ENST00000553165.1

AC027288.3-203, humanhuman

TSL 3 BASIC

Gene AC027288.3, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027288.3-203ENST00000553165 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
AC027288.3-203ENST00000553165 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
AC027288.3-203ENST00000553165 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
AC027288.3-203ENST00000553165 CCDC180Q9P1Z9 1646 aa18.41■□□□□ 0.54
AC027288.3-203ENST00000553165 ABCC9O60706 1549 aa18.25■□□□□ 0.51
AC027288.3-203ENST00000553165 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
AC027288.3-203ENST00000553165 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
AC027288.3-203ENST00000553165 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
AC027288.3-203ENST00000553165 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
AC027288.3-203ENST00000553165 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
AC027288.3-203ENST00000553165 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
AC027288.3-203ENST00000553165 NACADO15069 1562 aa17.27■□□□□ 0.35
AC027288.3-203ENST00000553165 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
AC027288.3-203ENST00000553165 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
AC027288.3-203ENST00000553165 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
AC027288.3-203ENST00000553165 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
AC027288.3-203ENST00000553165 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
AC027288.3-203ENST00000553165 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
AC027288.3-203ENST00000553165 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
AC027288.3-203ENST00000553165 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
AC027288.3-203ENST00000553165 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
AC027288.3-203ENST00000553165 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
AC027288.3-203ENST00000553165 CECR2Q9BXF3 1484 aa16.41■□□□□ 0.22
AC027288.3-203ENST00000553165 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.18
AC027288.3-203ENST00000553165 FOXD1Q16676 465 aa16.19■□□□□ 0.18
AC027288.3-203ENST00000553165 SMARCA4P51532 1647 aa16.11■□□□□ 0.17
AC027288.3-203ENST00000553165 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
AC027288.3-203ENST00000553165 MROH2BQ7Z745 1585 aa16.08■□□□□ 0.16
AC027288.3-203ENST00000553165 PEG3Q9GZU2 1588 aa16.01■□□□□ 0.15
AC027288.3-203ENST00000553165 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
AC027288.3-203ENST00000553165 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
AC027288.3-203ENST00000553165 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.14
AC027288.3-203ENST00000553165 NCAPD3P42695 1498 aa15.95■□□□□ 0.14
AC027288.3-203ENST00000553165 WIZO95785 1651 aa15.9■□□□□ 0.14
AC027288.3-203ENST00000553165 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
AC027288.3-203ENST00000553165 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
AC027288.3-203ENST00000553165 TOP2AP11388 1531 aaKnown RBP15.81■□□□□ 0.12
AC027288.3-203ENST00000553165 ERCC6Q03468 1493 aa15.72■□□□□ 0.11
AC027288.3-203ENST00000553165 DNAJC5Q9H3Z4 198 aa15.69■□□□□ 0.1
AC027288.3-203ENST00000553165 NESP48681 1621 aa15.68■□□□□ 0.1
AC027288.3-203ENST00000553165 CUX2O14529 1486 aa15.66■□□□□ 0.1
AC027288.3-203ENST00000553165 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
AC027288.3-203ENST00000553165 THOC2Q8NI27 1593 aaKnown RBP15.51■□□□□ 0.07
AC027288.3-203ENST00000553165 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
AC027288.3-203ENST00000553165 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
AC027288.3-203ENST00000553165 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
AC027288.3-203ENST00000553165 CFTRP13569 1480 aa15.47■□□□□ 0.07
AC027288.3-203ENST00000553165 MSH5O43196 834 aa15.4■□□□□ 0.06
AC027288.3-203ENST00000553165 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
AC027288.3-203ENST00000553165 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
AC027288.3-203ENST00000553165 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
AC027288.3-203ENST00000553165 WDR62O43379 1518 aa15.26■□□□□ 0.03
AC027288.3-203ENST00000553165 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
AC027288.3-203ENST00000553165 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
AC027288.3-203ENST00000553165 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
AC027288.3-203ENST00000553165 WRNQ14191 1432 aaPredicted RBP eCLIP15.18■□□□□ 0.02
AC027288.3-203ENST00000553165 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
AC027288.3-203ENST00000553165 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
AC027288.3-203ENST00000553165 TOP2BQ02880 1626 aa15.08■□□□□ 0
AC027288.3-203ENST00000553165 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
AC027288.3-203ENST00000553165 CUX1P39880 1505 aa15.06■□□□□ 0
AC027288.3-203ENST00000553165 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
AC027288.3-203ENST00000553165 TOPBP1Q92547 1522 aa15.05■□□□□ -0
AC027288.3-203ENST00000553165 SYNJ1O43426 1573 aa15.02■□□□□ -0
AC027288.3-203ENST00000553165 PIAS4Q8N2W9 510 aaPredicted RBP15□□□□□ -0.01
AC027288.3-203ENST00000553165 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
AC027288.3-203ENST00000553165 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
AC027288.3-203ENST00000553165 POLA1P09884 1462 aaPredicted RBP14.95□□□□□ -0.02
AC027288.3-203ENST00000553165 SOGA1O94964 1423 aa14.94□□□□□ -0.02
AC027288.3-203ENST00000553165 ZNF608Q9ULD9 1512 aaPredicted RBP14.94□□□□□ -0.02
AC027288.3-203ENST00000553165 EEA1Q15075 1411 aa14.91□□□□□ -0.02
AC027288.3-203ENST00000553165 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
AC027288.3-203ENST00000553165 ABCA10Q8WWZ4 1543 aa14.88□□□□□ -0.03
AC027288.3-203ENST00000553165 KIF27Q86VH2 1401 aa14.87□□□□□ -0.03
AC027288.3-203ENST00000553165 EIF4G3O43432 1585 aaKnown RBP14.86□□□□□ -0.03
AC027288.3-203ENST00000553165 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
AC027288.3-203ENST00000553165 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
AC027288.3-203ENST00000553165 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
AC027288.3-203ENST00000553165 RIMBP3CA6NJZ7 1639 aa14.83□□□□□ -0.04
AC027288.3-203ENST00000553165 RIMBP3BA6NNM3 1639 aa14.83□□□□□ -0.04
AC027288.3-203ENST00000553165 RIMBP3Q9UFD9 1639 aa14.83□□□□□ -0.04
AC027288.3-203ENST00000553165 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
AC027288.3-203ENST00000553165 AQRO60306 1485 aaKnown RBP eCLIP14.8□□□□□ -0.04
AC027288.3-203ENST00000553165 CHD1O14646 1710 aa14.78□□□□□ -0.04
AC027288.3-203ENST00000553165 GAPVD1Q14C86 1478 aa14.76□□□□□ -0.05
AC027288.3-203ENST00000553165 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
AC027288.3-203ENST00000553165 IGF1RP08069 1367 aa14.75□□□□□ -0.05
AC027288.3-203ENST00000553165 ARHGEF11O15085 1522 aa14.75□□□□□ -0.05
AC027288.3-203ENST00000553165 RUSC2Q8N2Y8 1516 aa14.75□□□□□ -0.05
AC027288.3-203ENST00000553165 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
AC027288.3-203ENST00000553165 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
AC027288.3-203ENST00000553165 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
AC027288.3-203ENST00000553165 GRIN2BQ13224 1484 aa14.71□□□□□ -0.05
AC027288.3-203ENST00000553165 FBLN2P98095 1184 aa14.71□□□□□ -0.05
AC027288.3-203ENST00000553165 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
AC027288.3-203ENST00000553165 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
AC027288.3-203ENST00000553165 SNAPC4Q5SXM2 1469 aa14.64□□□□□ -0.07
AC027288.3-203ENST00000553165 CYB5RLQ6IPT4 315 aa14.64□□□□□ -0.07
AC027288.3-203ENST00000553165 CUL7Q14999 1698 aa14.64□□□□□ -0.07
AC027288.3-203ENST00000553165 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms