RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-208ENST00000552984 NISCHQ9Y2I1 1504 aa28.86■■■□□ 2.21
TUBA1B-208ENST00000552984 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
TUBA1B-208ENST00000552984 ABCC9O60706 1549 aa25.78■■□□□ 1.72
TUBA1B-208ENST00000552984 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
TUBA1B-208ENST00000552984 NACADO15069 1562 aa24.39■■□□□ 1.5
TUBA1B-208ENST00000552984 DCAF8L2P0C7V8 631 aa24.25■■□□□ 1.47
TUBA1B-208ENST00000552984 UNC13AQ9UPW8 1703 aa24.22■■□□□ 1.47
TUBA1B-208ENST00000552984 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
TUBA1B-208ENST00000552984 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
TUBA1B-208ENST00000552984 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
TUBA1B-208ENST00000552984 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.43
TUBA1B-208ENST00000552984 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
TUBA1B-208ENST00000552984 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
TUBA1B-208ENST00000552984 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
TUBA1B-208ENST00000552984 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
TUBA1B-208ENST00000552984 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.32
TUBA1B-208ENST00000552984 EIF4G1Q04637 1599 aaKnown RBP23.28■■□□□ 1.32
TUBA1B-208ENST00000552984 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
TUBA1B-208ENST00000552984 SMARCA4P51532 1647 aa22.56■■□□□ 1.2
TUBA1B-208ENST00000552984 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
TUBA1B-208ENST00000552984 ATAD2BQ9ULI0 1458 aa22.47■■□□□ 1.19
TUBA1B-208ENST00000552984 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
TUBA1B-208ENST00000552984 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.18
TUBA1B-208ENST00000552984 HMGXB3Q12766 1538 aa22.38■■□□□ 1.17
TUBA1B-208ENST00000552984 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
TUBA1B-208ENST00000552984 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
TUBA1B-208ENST00000552984 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
TUBA1B-208ENST00000552984 NESP48681 1621 aa22.21■■□□□ 1.15
TUBA1B-208ENST00000552984 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
TUBA1B-208ENST00000552984 WIZO95785 1651 aa22.09■■□□□ 1.13
TUBA1B-208ENST00000552984 CUX2O14529 1486 aa22.09■■□□□ 1.13
TUBA1B-208ENST00000552984 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.12
TUBA1B-208ENST00000552984 LAMC3Q9Y6N6 1575 aa22.01■■□□□ 1.11
TUBA1B-208ENST00000552984 THOC2Q8NI27 1593 aaKnown RBP22■■□□□ 1.11
TUBA1B-208ENST00000552984 DNAJC5Q9H3Z4 198 aa21.89■■□□□ 1.09
TUBA1B-208ENST00000552984 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
TUBA1B-208ENST00000552984 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
TUBA1B-208ENST00000552984 CADPSQ9ULU8 1353 aa21.78■■□□□ 1.08
TUBA1B-208ENST00000552984 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
TUBA1B-208ENST00000552984 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
TUBA1B-208ENST00000552984 WDR62O43379 1518 aa21.65■■□□□ 1.06
TUBA1B-208ENST00000552984 CEP164Q9UPV0 1460 aa21.62■■□□□ 1.05
TUBA1B-208ENST00000552984 CFTRP13569 1480 aa21.6■■□□□ 1.05
TUBA1B-208ENST00000552984 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
TUBA1B-208ENST00000552984 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
TUBA1B-208ENST00000552984 CCDC88BA6NC98 1476 aa21.46■■□□□ 1.03
TUBA1B-208ENST00000552984 URB2Q14146 1524 aaKnown RBP21.46■■□□□ 1.03
TUBA1B-208ENST00000552984 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
TUBA1B-208ENST00000552984 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
TUBA1B-208ENST00000552984 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
TUBA1B-208ENST00000552984 IFT140Q96RY7 1462 aa21.14■□□□□ 0.98
TUBA1B-208ENST00000552984 EIF4G3O43432 1585 aaKnown RBP21.13■□□□□ 0.97
TUBA1B-208ENST00000552984 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
TUBA1B-208ENST00000552984 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
TUBA1B-208ENST00000552984 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
TUBA1B-208ENST00000552984 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
TUBA1B-208ENST00000552984 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
TUBA1B-208ENST00000552984 CHD1O14646 1710 aa21.01■□□□□ 0.95
TUBA1B-208ENST00000552984 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.957e-12■■■■■ 29.7
TUBA1B-208ENST00000552984 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
TUBA1B-208ENST00000552984 CUX1P39880 1505 aa20.94■□□□□ 0.94
TUBA1B-208ENST00000552984 RIMBP3CA6NJZ7 1639 aa20.94■□□□□ 0.94
TUBA1B-208ENST00000552984 RIMBP3BA6NNM3 1639 aa20.94■□□□□ 0.94
TUBA1B-208ENST00000552984 RIMBP3Q9UFD9 1639 aa20.94■□□□□ 0.94
TUBA1B-208ENST00000552984 SUPT5HO00267 1087 aaKnown RBP20.92■□□□□ 0.94
TUBA1B-208ENST00000552984 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
TUBA1B-208ENST00000552984 WDR97A6NE52 1622 aa20.87■□□□□ 0.93
TUBA1B-208ENST00000552984 SOGA1O94964 1423 aa20.86■□□□□ 0.93
TUBA1B-208ENST00000552984 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
TUBA1B-208ENST00000552984 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
TUBA1B-208ENST00000552984 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
TUBA1B-208ENST00000552984 SNAPC4Q5SXM2 1469 aa20.78■□□□□ 0.92
TUBA1B-208ENST00000552984 FBLN2P98095 1184 aa20.75■□□□□ 0.91
TUBA1B-208ENST00000552984 ABCA5Q8WWZ7 1642 aa20.7■□□□□ 0.9
TUBA1B-208ENST00000552984 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
TUBA1B-208ENST00000552984 MAGI1Q96QZ7 1491 aaPredicted RBP20.68■□□□□ 0.9
TUBA1B-208ENST00000552984 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
TUBA1B-208ENST00000552984 CLASP1Q7Z460 1538 aa20.66■□□□□ 0.9
TUBA1B-208ENST00000552984 SYNJ1O43426 1573 aa20.66■□□□□ 0.9
TUBA1B-208ENST00000552984 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
TUBA1B-208ENST00000552984 GAPVD1Q14C86 1478 aa20.64■□□□□ 0.89
TUBA1B-208ENST00000552984 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
TUBA1B-208ENST00000552984 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
TUBA1B-208ENST00000552984 SYNJ2O15056 1496 aa20.61■□□□□ 0.89
TUBA1B-208ENST00000552984 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
TUBA1B-208ENST00000552984 CHMP7Q8WUX9 453 aaPredicted RBP20.57■□□□□ 0.88
TUBA1B-208ENST00000552984 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
TUBA1B-208ENST00000552984 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
TUBA1B-208ENST00000552984 GRIN2AQ12879 1464 aa20.45■□□□□ 0.86
TUBA1B-208ENST00000552984 CEP170Q5SW79 1584 aa20.44■□□□□ 0.86
TUBA1B-208ENST00000552984 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
TUBA1B-208ENST00000552984 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
TUBA1B-208ENST00000552984 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
TUBA1B-208ENST00000552984 NUP160Q12769 1436 aa20.36■□□□□ 0.85
TUBA1B-208ENST00000552984 SHROOM2Q13796 1616 aa20.34■□□□□ 0.85
TUBA1B-208ENST00000552984 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
TUBA1B-208ENST00000552984 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
TUBA1B-208ENST00000552984 CUL7Q14999 1698 aa20.17■□□□□ 0.82
TUBA1B-208ENST00000552984 PRG4Q92954 1404 aaPredicted RBP20.14■□□□□ 0.81
TUBA1B-208ENST00000552984 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms