RNA–Protein interactions for RNA: ENST00000552856.1

AC078923.1-201, humanhuman

TSL 3 BASIC

Gene AC078923.1, Length 748 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078923.1-201ENST00000552856 NISCHQ9Y2I1 1504 aa31.49■■■□□ 2.63
AC078923.1-201ENST00000552856 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
AC078923.1-201ENST00000552856 ABCC9O60706 1549 aa27.89■■■□□ 2.06
AC078923.1-201ENST00000552856 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
AC078923.1-201ENST00000552856 NACADO15069 1562 aa26.49■■□□□ 1.83
AC078923.1-201ENST00000552856 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
AC078923.1-201ENST00000552856 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
AC078923.1-201ENST00000552856 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
AC078923.1-201ENST00000552856 PABPN1Q86U42 306 aaKnown RBP eCLIP26.05■■□□□ 1.76
AC078923.1-201ENST00000552856 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
AC078923.1-201ENST00000552856 DNAJC5BQ9UF47 199 aa26.04■■□□□ 1.76
AC078923.1-201ENST00000552856 DCAF1Q9Y4B6 1507 aa25.99■■□□□ 1.75
AC078923.1-201ENST00000552856 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
AC078923.1-201ENST00000552856 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
AC078923.1-201ENST00000552856 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
AC078923.1-201ENST00000552856 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
AC078923.1-201ENST00000552856 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
AC078923.1-201ENST00000552856 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
AC078923.1-201ENST00000552856 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
AC078923.1-201ENST00000552856 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
AC078923.1-201ENST00000552856 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
AC078923.1-201ENST00000552856 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
AC078923.1-201ENST00000552856 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
AC078923.1-201ENST00000552856 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
AC078923.1-201ENST00000552856 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
AC078923.1-201ENST00000552856 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
AC078923.1-201ENST00000552856 BAZ1BQ9UIG0 1483 aaKnown RBP24.2■■□□□ 1.47
AC078923.1-201ENST00000552856 NESP48681 1621 aa24.08■■□□□ 1.45
AC078923.1-201ENST00000552856 WIZO95785 1651 aa24.01■■□□□ 1.43
AC078923.1-201ENST00000552856 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
AC078923.1-201ENST00000552856 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
AC078923.1-201ENST00000552856 CUX2O14529 1486 aa23.86■■□□□ 1.41
AC078923.1-201ENST00000552856 LAMC3Q9Y6N6 1575 aa23.85■■□□□ 1.41
AC078923.1-201ENST00000552856 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
AC078923.1-201ENST00000552856 THOC2Q8NI27 1593 aaKnown RBP23.73■■□□□ 1.39
AC078923.1-201ENST00000552856 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.39
AC078923.1-201ENST00000552856 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
AC078923.1-201ENST00000552856 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
AC078923.1-201ENST00000552856 DNAJC5Q9H3Z4 198 aa23.61■■□□□ 1.37
AC078923.1-201ENST00000552856 CFTRP13569 1480 aa23.56■■□□□ 1.36
AC078923.1-201ENST00000552856 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
AC078923.1-201ENST00000552856 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
AC078923.1-201ENST00000552856 WDR62O43379 1518 aa23.45■■□□□ 1.34
AC078923.1-201ENST00000552856 CCDC88BA6NC98 1476 aa23.45■■□□□ 1.34
AC078923.1-201ENST00000552856 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
AC078923.1-201ENST00000552856 URB2Q14146 1524 aaKnown RBP23.32■■□□□ 1.32
AC078923.1-201ENST00000552856 PRDM2Q13029 1718 aa23.25■■□□□ 1.31
AC078923.1-201ENST00000552856 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
AC078923.1-201ENST00000552856 TOPBP1Q92547 1522 aa23.08■■□□□ 1.29
AC078923.1-201ENST00000552856 SUPT5HO00267 1087 aaKnown RBP23.02■■□□□ 1.28
AC078923.1-201ENST00000552856 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
AC078923.1-201ENST00000552856 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
AC078923.1-201ENST00000552856 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
AC078923.1-201ENST00000552856 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
AC078923.1-201ENST00000552856 POLA1P09884 1462 aaPredicted RBP22.87■■□□□ 1.25
AC078923.1-201ENST00000552856 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
AC078923.1-201ENST00000552856 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
AC078923.1-201ENST00000552856 EIF4G3O43432 1585 aaKnown RBP22.82■■□□□ 1.24
AC078923.1-201ENST00000552856 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
AC078923.1-201ENST00000552856 CUX1P39880 1505 aa22.81■■□□□ 1.24
AC078923.1-201ENST00000552856 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.24
AC078923.1-201ENST00000552856 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
AC078923.1-201ENST00000552856 SOGA1O94964 1423 aa22.75■■□□□ 1.23
AC078923.1-201ENST00000552856 TDRD9Q8NDG6 1382 aaKnown RBP22.71■■□□□ 1.23
AC078923.1-201ENST00000552856 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
AC078923.1-201ENST00000552856 CHD1O14646 1710 aa22.59■■□□□ 1.21
AC078923.1-201ENST00000552856 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
AC078923.1-201ENST00000552856 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
AC078923.1-201ENST00000552856 FBLN2P98095 1184 aa22.54■■□□□ 1.2
AC078923.1-201ENST00000552856 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
AC078923.1-201ENST00000552856 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
AC078923.1-201ENST00000552856 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
AC078923.1-201ENST00000552856 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
AC078923.1-201ENST00000552856 ABCA10Q8WWZ4 1543 aa22.5■■□□□ 1.19
AC078923.1-201ENST00000552856 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
AC078923.1-201ENST00000552856 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
AC078923.1-201ENST00000552856 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
AC078923.1-201ENST00000552856 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
AC078923.1-201ENST00000552856 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
AC078923.1-201ENST00000552856 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
AC078923.1-201ENST00000552856 MAGI1Q96QZ7 1491 aaPredicted RBP22.46■■□□□ 1.19
AC078923.1-201ENST00000552856 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
AC078923.1-201ENST00000552856 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
AC078923.1-201ENST00000552856 CHMP7Q8WUX9 453 aaPredicted RBP22.41■■□□□ 1.18
AC078923.1-201ENST00000552856 SYNJ2O15056 1496 aa22.4■■□□□ 1.18
AC078923.1-201ENST00000552856 CLASP1Q7Z460 1538 aa22.37■■□□□ 1.17
AC078923.1-201ENST00000552856 CYB5RLQ6IPT4 315 aa22.32■■□□□ 1.16
AC078923.1-201ENST00000552856 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
AC078923.1-201ENST00000552856 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
AC078923.1-201ENST00000552856 GRIN2AQ12879 1464 aa22.23■■□□□ 1.15
AC078923.1-201ENST00000552856 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
AC078923.1-201ENST00000552856 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
AC078923.1-201ENST00000552856 NUP160Q12769 1436 aa22.17■■□□□ 1.14
AC078923.1-201ENST00000552856 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
AC078923.1-201ENST00000552856 ERCC6L2Q5T890 1561 aa22.1■■□□□ 1.13
AC078923.1-201ENST00000552856 IGF1RP08069 1367 aa22.05■■□□□ 1.12
AC078923.1-201ENST00000552856 SHROOM2Q13796 1616 aa22.02■■□□□ 1.12
AC078923.1-201ENST00000552856 KIF27Q86VH2 1401 aa22.02■■□□□ 1.12
AC078923.1-201ENST00000552856 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
AC078923.1-201ENST00000552856 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms