RNA–Protein interactions for RNA: ENST00000552754.5

CD63-215, Transcript of CD63 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD63, Length 682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD63-215ENST00000552754 NISCHQ9Y2I1 1504 aa28.55■■■□□ 2.16
CD63-215ENST00000552754 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
CD63-215ENST00000552754 ABCC9O60706 1549 aa24.86■■□□□ 1.57
CD63-215ENST00000552754 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
CD63-215ENST00000552754 RB1CC1Q8TDY2 1594 aa23.88■■□□□ 1.41
CD63-215ENST00000552754 NACADO15069 1562 aa23.86■■□□□ 1.41
CD63-215ENST00000552754 ZCCHC6Q5VYS8 1495 aaKnown RBP23.77■■□□□ 1.4
CD63-215ENST00000552754 MYO15BQ96JP2 1530 aa23.73■■□□□ 1.39
CD63-215ENST00000552754 DCAF1Q9Y4B6 1507 aa23.63■■□□□ 1.37
CD63-215ENST00000552754 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
CD63-215ENST00000552754 UNC13AQ9UPW8 1703 aa23.26■■□□□ 1.31
CD63-215ENST00000552754 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
CD63-215ENST00000552754 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
CD63-215ENST00000552754 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
CD63-215ENST00000552754 DNAJC5BQ9UF47 199 aa22.85■■□□□ 1.25
CD63-215ENST00000552754 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
CD63-215ENST00000552754 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
CD63-215ENST00000552754 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
CD63-215ENST00000552754 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
CD63-215ENST00000552754 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
CD63-215ENST00000552754 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
CD63-215ENST00000552754 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
CD63-215ENST00000552754 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
CD63-215ENST00000552754 SMARCA2P51531 1590 aa22■■□□□ 1.11
CD63-215ENST00000552754 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
CD63-215ENST00000552754 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
CD63-215ENST00000552754 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
CD63-215ENST00000552754 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
CD63-215ENST00000552754 WIZO95785 1651 aa21.73■■□□□ 1.07
CD63-215ENST00000552754 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
CD63-215ENST00000552754 NESP48681 1621 aa21.5■■□□□ 1.03
CD63-215ENST00000552754 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
CD63-215ENST00000552754 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
CD63-215ENST00000552754 CADPSQ9ULU8 1353 aa21.42■■□□□ 1.02
CD63-215ENST00000552754 PDS5BQ9NTI5 1447 aa21.33■■□□□ 1.01
CD63-215ENST00000552754 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
CD63-215ENST00000552754 CFTRP13569 1480 aa21.27■■□□□ 1
CD63-215ENST00000552754 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
CD63-215ENST00000552754 CUX2O14529 1486 aa21.2■□□□□ 0.98
CD63-215ENST00000552754 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
CD63-215ENST00000552754 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
CD63-215ENST00000552754 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.97
CD63-215ENST00000552754 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
CD63-215ENST00000552754 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
CD63-215ENST00000552754 AEBP2Q6ZN18 517 aaPredicted RBP21.02■□□□□ 0.96
CD63-215ENST00000552754 WDR62O43379 1518 aa21■□□□□ 0.95
CD63-215ENST00000552754 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
CD63-215ENST00000552754 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
CD63-215ENST00000552754 ABCC8Q09428 1581 aa20.81■□□□□ 0.92
CD63-215ENST00000552754 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
CD63-215ENST00000552754 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
CD63-215ENST00000552754 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
CD63-215ENST00000552754 CUX1P39880 1505 aa20.64■□□□□ 0.9
CD63-215ENST00000552754 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
CD63-215ENST00000552754 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
CD63-215ENST00000552754 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.89
CD63-215ENST00000552754 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
CD63-215ENST00000552754 SOGA1O94964 1423 aa20.57■□□□□ 0.88
CD63-215ENST00000552754 TARBP1Q13395 1621 aaKnown RBP20.55■□□□□ 0.88
CD63-215ENST00000552754 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
CD63-215ENST00000552754 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.886e-6■■■□□ 16.7
CD63-215ENST00000552754 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.873e-7■■■■■ 29.4
CD63-215ENST00000552754 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
CD63-215ENST00000552754 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
CD63-215ENST00000552754 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
CD63-215ENST00000552754 SYNJ1O43426 1573 aa20.43■□□□□ 0.86
CD63-215ENST00000552754 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
CD63-215ENST00000552754 WDR97A6NE52 1622 aa20.39■□□□□ 0.86
CD63-215ENST00000552754 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
CD63-215ENST00000552754 OSCARQ8IYS5 282 aa20.37■□□□□ 0.85
CD63-215ENST00000552754 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
CD63-215ENST00000552754 GAPVD1Q14C86 1478 aa20.32■□□□□ 0.84
CD63-215ENST00000552754 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
CD63-215ENST00000552754 FBLN2P98095 1184 aa20.26■□□□□ 0.83
CD63-215ENST00000552754 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
CD63-215ENST00000552754 MAGI1Q96QZ7 1491 aaPredicted RBP20.25■□□□□ 0.83
CD63-215ENST00000552754 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
CD63-215ENST00000552754 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
CD63-215ENST00000552754 CHD1O14646 1710 aa20.18■□□□□ 0.82
CD63-215ENST00000552754 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
CD63-215ENST00000552754 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
CD63-215ENST00000552754 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
CD63-215ENST00000552754 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
CD63-215ENST00000552754 ADAMTS12P58397 1594 aa20.08■□□□□ 0.8
CD63-215ENST00000552754 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
CD63-215ENST00000552754 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
CD63-215ENST00000552754 IGF1RP08069 1367 aa20.04■□□□□ 0.8
CD63-215ENST00000552754 CLASP1Q7Z460 1538 aa20.01■□□□□ 0.79
CD63-215ENST00000552754 ARHGEF11O15085 1522 aa19.98■□□□□ 0.79
CD63-215ENST00000552754 NUP160Q12769 1436 aa19.97■□□□□ 0.79
CD63-215ENST00000552754 RIMBP3CA6NJZ7 1639 aa19.96■□□□□ 0.79
CD63-215ENST00000552754 RIMBP3BA6NNM3 1639 aa19.96■□□□□ 0.79
CD63-215ENST00000552754 RIMBP3Q9UFD9 1639 aa19.96■□□□□ 0.79
CD63-215ENST00000552754 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
CD63-215ENST00000552754 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
CD63-215ENST00000552754 CUL7Q14999 1698 aa19.91■□□□□ 0.78
CD63-215ENST00000552754 RUSC2Q8N2Y8 1516 aa19.91■□□□□ 0.78
CD63-215ENST00000552754 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
CD63-215ENST00000552754 CYB5RLQ6IPT4 315 aa19.85■□□□□ 0.77
CD63-215ENST00000552754 ARAP1Q96P48 1450 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms