RNA–Protein interactions for RNA: ENST00000552706.6

ACAD10-223, Transcript of acyl-CoA dehydrogenase family member 10, human

TSL 3

Gene ACAD10, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACAD10-223	ENST00000552706	NISCH	Q9Y2I1	1504 aa		13.5	□□□□□ -0.25
ACAD10-223	ENST00000552706	CCDC180	Q9P1Z9	1646 aa		11.93	□□□□□ -0.5
ACAD10-223	ENST00000552706	ABCC9	O60706	1549 aa		11.82	□□□□□ -0.52
ACAD10-223	ENST00000552706	DCAF8L2	P0C7V8	631 aa		11.54	□□□□□ -0.56
ACAD10-223	ENST00000552706	DNAJC5B	Q9UF47	199 aa		11.41	□□□□□ -0.58
ACAD10-223	ENST00000552706	RB1CC1	Q8TDY2	1594 aa		11.33	□□□□□ -0.6
ACAD10-223	ENST00000552706	NACAD	O15069	1562 aa		11.31	□□□□□ -0.6
ACAD10-223	ENST00000552706	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.26	□□□□□ -0.61
ACAD10-223	ENST00000552706	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.21	□□□□□ -0.61
ACAD10-223	ENST00000552706	MYO15B	Q96JP2	1530 aa		11.2	□□□□□ -0.62
ACAD10-223	ENST00000552706	DCAF1	Q9Y4B6	1507 aa		11.14	□□□□□ -0.63
ACAD10-223	ENST00000552706	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
ACAD10-223	ENST00000552706	DNAJC5	Q9H3Z4	198 aa		11.01	□□□□□ -0.65
ACAD10-223	ENST00000552706	SCRIB	Q14160	1630 aa		10.94	□□□□□ -0.66
ACAD10-223	ENST00000552706	BICRA	Q9NZM4	1560 aa		10.89	□□□□□ -0.67
ACAD10-223	ENST00000552706	UNC13A	Q9UPW8	1703 aa		10.88	□□□□□ -0.67
ACAD10-223	ENST00000552706	SHROOM4	Q9ULL8	1493 aa		10.85	□□□□□ -0.67
ACAD10-223	ENST00000552706	EIF4G1	Q04637	1599 aa	Known RBP	10.66	□□□□□ -0.7
ACAD10-223	ENST00000552706	CECR2	Q9BXF3	1484 aa		10.63	□□□□□ -0.71
ACAD10-223	ENST00000552706	CC2D2A	Q9P2K1	1620 aa		10.62	□□□□□ -0.71
ACAD10-223	ENST00000552706	CHIC1	Q5VXU3	224 aa		10.54	□□□□□ -0.72
ACAD10-223	ENST00000552706	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.48	□□□□□ -0.73
ACAD10-223	ENST00000552706	NCAPD3	P42695	1498 aa		10.46	□□□□□ -0.74
ACAD10-223	ENST00000552706	ATAD2B	Q9ULI0	1458 aa		10.45	□□□□□ -0.74
ACAD10-223	ENST00000552706	SMARCA2	P51531	1590 aa		10.44	□□□□□ -0.74
ACAD10-223	ENST00000552706	SMARCA4	P51532	1647 aa		10.44	□□□□□ -0.74
ACAD10-223	ENST00000552706	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.39	□□□□□ -0.75
ACAD10-223	ENST00000552706	MROH2B	Q7Z745	1585 aa		10.39	□□□□□ -0.75
ACAD10-223	ENST00000552706	HMGXB3	Q12766	1538 aa		10.34	□□□□□ -0.75
ACAD10-223	ENST00000552706	CUX2	O14529	1486 aa		10.32	□□□□□ -0.76
ACAD10-223	ENST00000552706	RSF1	Q96T23	1441 aa	Predicted RBP	10.32	□□□□□ -0.76
ACAD10-223	ENST00000552706	PEG3	Q9GZU2	1588 aa		10.31	□□□□□ -0.76
ACAD10-223	ENST00000552706	ERCC6	Q03468	1493 aa		10.25	□□□□□ -0.77
ACAD10-223	ENST00000552706	WIZ	O95785	1651 aa		10.24	□□□□□ -0.77
ACAD10-223	ENST00000552706	SUPT5H	O00267	1087 aa	Known RBP	10.2	□□□□□ -0.78
ACAD10-223	ENST00000552706	CADPS	Q9ULU8	1353 aa		10.2	□□□□□ -0.78
ACAD10-223	ENST00000552706	PDS5B	Q9NTI5	1447 aa		10.19	□□□□□ -0.78
ACAD10-223	ENST00000552706	NES	P48681	1621 aa		10.18	□□□□□ -0.78
ACAD10-223	ENST00000552706	TOP2A	P11388	1531 aa	Known RBP	10.17	□□□□□ -0.78
ACAD10-223	ENST00000552706	TRIM41	Q8WV44	630 aa		10.16	□□□□□ -0.78
ACAD10-223	ENST00000552706	LAMC3	Q9Y6N6	1575 aa		10.14	□□□□□ -0.79
ACAD10-223	ENST00000552706	CCDC88B	A6NC98	1476 aa		10.09	□□□□□ -0.79
ACAD10-223	ENST00000552706	CFTR	P13569	1480 aa		10.08	□□□□□ -0.8
ACAD10-223	ENST00000552706	FANCD2	Q9BXW9	1451 aa		10.04	□□□□□ -0.8
ACAD10-223	ENST00000552706	CEP164	Q9UPV0	1460 aa		10.04	□□□□□ -0.8
ACAD10-223	ENST00000552706	MRC2	Q9UBG0	1479 aa		10.02	□□□□□ -0.81
ACAD10-223	ENST00000552706	KIF21A	Q7Z4S6	1674 aa		9.97	□□□□□ -0.81
ACAD10-223	ENST00000552706	THOC2	Q8NI27	1593 aa	Known RBP	9.94	□□□□□ -0.82
ACAD10-223	ENST00000552706	ABCC8	Q09428	1581 aa		9.92	□□□□□ -0.82
ACAD10-223	ENST00000552706	WDR62	O43379	1518 aa		9.92	□□□□□ -0.82
ACAD10-223	ENST00000552706	URB2	Q14146	1524 aa	Known RBP	9.9	□□□□□ -0.82
ACAD10-223	ENST00000552706	TOPBP1	Q92547	1522 aa		9.85	□□□□□ -0.83
ACAD10-223	ENST00000552706	PRDM2	Q13029	1718 aa		9.84	□□□□□ -0.83
ACAD10-223	ENST00000552706	IFT140	Q96RY7	1462 aa		9.84	□□□□□ -0.83
ACAD10-223	ENST00000552706	DNMBP	Q6XZF7	1577 aa		9.82	□□□□□ -0.84
ACAD10-223	ENST00000552706	SOGA1	O94964	1423 aa		9.82	□□□□□ -0.84
ACAD10-223	ENST00000552706	OSCAR	Q8IYS5	282 aa		9.8	□□□□□ -0.84
ACAD10-223	ENST00000552706	FBLN2	P98095	1184 aa		9.78	□□□□□ -0.84
ACAD10-223	ENST00000552706	POLA1	P09884	1462 aa	Predicted RBP	9.77	□□□□□ -0.85
ACAD10-223	ENST00000552706	TDRD9	Q8NDG6	1382 aa	Known RBP	9.75	□□□□□ -0.85
ACAD10-223	ENST00000552706	WRN	Q14191	1432 aa	Predicted RBP eCLIP	9.75	□□□□□ -0.85
ACAD10-223	ENST00000552706	AQR	O60306	1485 aa	Known RBP eCLIP	9.75	□□□□□ -0.85
ACAD10-223	ENST00000552706	FGD5	Q6ZNL6	1462 aa		9.75	□□□□□ -0.85
ACAD10-223	ENST00000552706	RAD54L2	Q9Y4B4	1467 aa		9.75	□□□□□ -0.85
ACAD10-223	ENST00000552706	CUX1	P39880	1505 aa		9.75	□□□□□ -0.85
ACAD10-223	ENST00000552706	ZNF608	Q9ULD9	1512 aa	Predicted RBP	9.75	□□□□□ -0.85
ACAD10-223	ENST00000552706	CHMP7	Q8WUX9	453 aa	Predicted RBP	9.73	□□□□□ -0.85
ACAD10-223	ENST00000552706	SENP3	Q9H4L4	574 aa	Predicted RBP	9.69	□□□□□ -0.86
ACAD10-223	ENST00000552706	TARBP1	Q13395	1621 aa	Known RBP	9.67	□□□□□ -0.86
ACAD10-223	ENST00000552706	GRIN2B	Q13224	1484 aa		9.66	□□□□□ -0.86
ACAD10-223	ENST00000552706	GAPVD1	Q14C86	1478 aa		9.66	□□□□□ -0.86
ACAD10-223	ENST00000552706	EIF4G3	O43432	1585 aa	Known RBP	9.65	□□□□□ -0.86
ACAD10-223	ENST00000552706	ABCA10	Q8WWZ4	1543 aa		9.65	□□□□□ -0.86
ACAD10-223	ENST00000552706	TOP2B	Q02880	1626 aa		9.64	□□□□□ -0.87
ACAD10-223	ENST00000552706	WDR97	A6NE52	1622 aa		9.63	□□□□□ -0.87
ACAD10-223	ENST00000552706	SNAPC4	Q5SXM2	1469 aa		9.62	□□□□□ -0.87
ACAD10-223	ENST00000552706	MAGI1	Q96QZ7	1491 aa	Predicted RBP	9.62	□□□□□ -0.87
ACAD10-223	ENST00000552706	SYNJ1	O43426	1573 aa		9.62	□□□□□ -0.87
ACAD10-223	ENST00000552706	RIMBP3C	A6NJZ7	1639 aa		9.6	□□□□□ -0.87
ACAD10-223	ENST00000552706	RIMBP3B	A6NNM3	1639 aa		9.6	□□□□□ -0.87
ACAD10-223	ENST00000552706	RIMBP3	Q9UFD9	1639 aa		9.6	□□□□□ -0.87
ACAD10-223	ENST00000552706	BIVM-ERCC5	R4GMW8	1640 aa		9.6	□□□□□ -0.87
ACAD10-223	ENST00000552706	KIF27	Q86VH2	1401 aa		9.59	□□□□□ -0.87
ACAD10-223	ENST00000552706	SYNJ2	O15056	1496 aa		9.59	□□□□□ -0.87
ACAD10-223	ENST00000552706	FHAD1	B1AJZ9	1412 aa		9.56	□□□□□ -0.88
ACAD10-223	ENST00000552706	TRH	P20396	242 aa	Predicted RBP	9.55	□□□□□ -0.88
ACAD10-223	ENST00000552706	CYB5RL	Q6IPT4	315 aa		9.55	□□□□□ -0.88
ACAD10-223	ENST00000552706	ARHGEF11	O15085	1522 aa		9.54	□□□□□ -0.88
ACAD10-223	ENST00000552706	ERICH3	Q5RHP9	1530 aa		9.54	□□□□□ -0.88
ACAD10-223	ENST00000552706	IGF1R	P08069	1367 aa		9.53	□□□□□ -0.88
ACAD10-223	ENST00000552706	ABCA5	Q8WWZ7	1642 aa		9.53	□□□□□ -0.88
ACAD10-223	ENST00000552706	CARMIL1	Q5VZK9	1371 aa		9.51	□□□□□ -0.89
ACAD10-223	ENST00000552706	GRIN2A	Q12879	1464 aa		9.51	□□□□□ -0.89
ACAD10-223	ENST00000552706	JPH4	Q96JJ6	628 aa		9.5	□□□□□ -0.89
ACAD10-223	ENST00000552706	PHF23	Q9BUL5	403 aa	Predicted RBP	9.5	□□□□□ -0.89
ACAD10-223	ENST00000552706	CHD1	O14646	1710 aa		9.5	□□□□□ -0.89
ACAD10-223	ENST00000552706	PBRM1	Q86U86	1689 aa		9.49	□□□□□ -0.89
ACAD10-223	ENST00000552706	ILDR1	Q86SU0	546 aa	Predicted RBP	9.47	□□□□□ -0.89
ACAD10-223	ENST00000552706	NUP160	Q12769	1436 aa		9.46	□□□□□ -0.9
ACAD10-223	ENST00000552706	ADAMTS12	P58397	1594 aa		9.46	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms