RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 NISCHQ9Y2I1 1504 aa10.02□□□□□ -0.81
ERBB3-220ENST00000552691 CCDC180Q9P1Z9 1646 aa8.86□□□□□ -0.99
ERBB3-220ENST00000552691 ABCC9O60706 1549 aa8.46□□□□□ -1.05
ERBB3-220ENST00000552691 ZCCHC6Q5VYS8 1495 aaKnown RBP8.37□□□□□ -1.07
ERBB3-220ENST00000552691 DCAF8L2P0C7V8 631 aa8.3□□□□□ -1.08
ERBB3-220ENST00000552691 DCAF1Q9Y4B6 1507 aa8.29□□□□□ -1.08
ERBB3-220ENST00000552691 NACADO15069 1562 aa8.26□□□□□ -1.09
ERBB3-220ENST00000552691 MYO15BQ96JP2 1530 aa8.25□□□□□ -1.09
ERBB3-220ENST00000552691 RB1CC1Q8TDY2 1594 aa8.23□□□□□ -1.09
ERBB3-220ENST00000552691 UNC13AQ9UPW8 1703 aa8.15□□□□□ -1.1
ERBB3-220ENST00000552691 SCRIBQ14160 1630 aa8.08□□□□□ -1.12
ERBB3-220ENST00000552691 SHROOM4Q9ULL8 1493 aa8.01□□□□□ -1.13
ERBB3-220ENST00000552691 BICRAQ9NZM4 1560 aa7.99□□□□□ -1.13
ERBB3-220ENST00000552691 PABPN1Q86U42 306 aaKnown RBP eCLIP7.93□□□□□ -1.14
ERBB3-220ENST00000552691 CECR2Q9BXF3 1484 aa7.78□□□□□ -1.16
ERBB3-220ENST00000552691 SMARCA4P51532 1647 aa7.75□□□□□ -1.17
ERBB3-220ENST00000552691 EIF4G1Q04637 1599 aaKnown RBP7.75□□□□□ -1.17
ERBB3-220ENST00000552691 BAZ1AQ9NRL2 1556 aaPredicted RBP7.75□□□□□ -1.17
ERBB3-220ENST00000552691 MROH2BQ7Z745 1585 aa7.73□□□□□ -1.17
ERBB3-220ENST00000552691 CC2D2AQ9P2K1 1620 aa7.69□□□□□ -1.18
ERBB3-220ENST00000552691 WIZO95785 1651 aa7.69□□□□□ -1.18
ERBB3-220ENST00000552691 RSF1Q96T23 1441 aaPredicted RBP7.69□□□□□ -1.18
ERBB3-220ENST00000552691 PEG3Q9GZU2 1588 aa7.67□□□□□ -1.18
ERBB3-220ENST00000552691 SMARCA2P51531 1590 aa7.64□□□□□ -1.19
ERBB3-220ENST00000552691 ATAD2BQ9ULI0 1458 aa7.64□□□□□ -1.19
ERBB3-220ENST00000552691 SUPT5HO00267 1087 aaKnown RBP7.63□□□□□ -1.19
ERBB3-220ENST00000552691 DNAJC5BQ9UF47 199 aa7.62□□□□□ -1.19
ERBB3-220ENST00000552691 NCAPD3P42695 1498 aa7.6□□□□□ -1.19
ERBB3-220ENST00000552691 HMGXB3Q12766 1538 aa7.59□□□□□ -1.19
ERBB3-220ENST00000552691 BAZ1BQ9UIG0 1483 aaKnown RBP7.58□□□□□ -1.2
ERBB3-220ENST00000552691 TOP2AP11388 1531 aaKnown RBP7.57□□□□□ -1.2
ERBB3-220ENST00000552691 CCDC88BA6NC98 1476 aa7.49□□□□□ -1.21
ERBB3-220ENST00000552691 PRDM2Q13029 1718 aa7.45□□□□□ -1.22
ERBB3-220ENST00000552691 LAMC3Q9Y6N6 1575 aa7.4□□□□□ -1.22
ERBB3-220ENST00000552691 NESP48681 1621 aa7.39□□□□□ -1.23
ERBB3-220ENST00000552691 CADPSQ9ULU8 1353 aa7.39□□□□□ -1.23
ERBB3-220ENST00000552691 CFTRP13569 1480 aa7.38□□□□□ -1.23
ERBB3-220ENST00000552691 KIF21AQ7Z4S6 1674 aa7.36□□□□□ -1.23
ERBB3-220ENST00000552691 FANCD2Q9BXW9 1451 aa7.31□□□□□ -1.24
ERBB3-220ENST00000552691 PDS5BQ9NTI5 1447 aa7.31□□□□□ -1.24
ERBB3-220ENST00000552691 CEP164Q9UPV0 1460 aa7.29□□□□□ -1.24
ERBB3-220ENST00000552691 ABCC8Q09428 1581 aa7.29□□□□□ -1.24
ERBB3-220ENST00000552691 ERCC6Q03468 1493 aa7.27□□□□□ -1.25
ERBB3-220ENST00000552691 BIVM-ERCC5R4GMW8 1640 aa7.25□□□□□ -1.25
ERBB3-220ENST00000552691 THOC2Q8NI27 1593 aaKnown RBP7.25□□□□□ -1.25
ERBB3-220ENST00000552691 SYNJ1O43426 1573 aa7.24□□□□□ -1.25
ERBB3-220ENST00000552691 TOP2BQ02880 1626 aa7.23□□□□□ -1.25
ERBB3-220ENST00000552691 CUX1P39880 1505 aa7.23□□□□□ -1.25
ERBB3-220ENST00000552691 URB2Q14146 1524 aaKnown RBP7.23□□□□□ -1.25
ERBB3-220ENST00000552691 WRNQ14191 1432 aaPredicted RBP eCLIP7.23□□□□□ -1.25
ERBB3-220ENST00000552691 DNMBPQ6XZF7 1577 aa7.23□□□□□ -1.25
ERBB3-220ENST00000552691 MRC2Q9UBG0 1479 aa7.23□□□□□ -1.25
ERBB3-220ENST00000552691 TOPBP1Q92547 1522 aa7.22□□□□□ -1.25
ERBB3-220ENST00000552691 CHIC1Q5VXU3 224 aa7.22□□□□□ -1.25
ERBB3-220ENST00000552691 WDR62O43379 1518 aa7.21□□□□□ -1.26
ERBB3-220ENST00000552691 TRIM41Q8WV44 630 aa7.19□□□□□ -1.26
ERBB3-220ENST00000552691 FGD5Q6ZNL6 1462 aa7.17□□□□□ -1.26
ERBB3-220ENST00000552691 POLA1P09884 1462 aaPredicted RBP7.17□□□□□ -1.26
ERBB3-220ENST00000552691 WDR97A6NE52 1622 aa7.16□□□□□ -1.26
ERBB3-220ENST00000552691 TARBP1Q13395 1621 aaKnown RBP7.15□□□□□ -1.27
ERBB3-220ENST00000552691 CUX2O14529 1486 aa7.14□□□□□ -1.27
ERBB3-220ENST00000552691 SOGA1O94964 1423 aa7.14□□□□□ -1.27
ERBB3-220ENST00000552691 RAD54L2Q9Y4B4 1467 aa7.13□□□□□ -1.27
ERBB3-220ENST00000552691 ABCA10Q8WWZ4 1543 aa7.11□□□□□ -1.27
ERBB3-220ENST00000552691 IFT140Q96RY7 1462 aa7.11□□□□□ -1.27
ERBB3-220ENST00000552691 PBRM1Q86U86 1689 aa7.1□□□□□ -1.27
ERBB3-220ENST00000552691 ABCA5Q8WWZ7 1642 aa7.09□□□□□ -1.27
ERBB3-220ENST00000552691 RUSC2Q8N2Y8 1516 aa7.09□□□□□ -1.27
ERBB3-220ENST00000552691 EIF4G3O43432 1585 aaKnown RBP7.08□□□□□ -1.28
ERBB3-220ENST00000552691 ZNF608Q9ULD9 1512 aaPredicted RBP7.08□□□□□ -1.28
ERBB3-220ENST00000552691 TDRD9Q8NDG6 1382 aaKnown RBP7.08□□□□□ -1.28
ERBB3-220ENST00000552691 KIF27Q86VH2 1401 aa7.07□□□□□ -1.28
ERBB3-220ENST00000552691 AQRO60306 1485 aaKnown RBP eCLIP7.06□□□□□ -1.28
ERBB3-220ENST00000552691 GAPVD1Q14C86 1478 aa7.06□□□□□ -1.28
ERBB3-220ENST00000552691 EEA1Q15075 1411 aa7.05□□□□□ -1.28
ERBB3-220ENST00000552691 FAM9AQ8IZU1 332 aaPredicted RBP7.04□□□□□ -1.28
ERBB3-220ENST00000552691 ERICH3Q5RHP9 1530 aa7.04□□□□□ -1.28
ERBB3-220ENST00000552691 CUL7Q14999 1698 aa7.03□□□□□ -1.28
ERBB3-220ENST00000552691 IGF1RP08069 1367 aa7.03□□□□□ -1.28
ERBB3-220ENST00000552691 GRIN2BQ13224 1484 aa7.03□□□□□ -1.28
ERBB3-220ENST00000552691 CSRNP3Q8WYN3 585 aa7.02□□□□□ -1.29
ERBB3-220ENST00000552691 CHD1O14646 1710 aa7.01□□□□□ -1.29
ERBB3-220ENST00000552691 SNAPC4Q5SXM2 1469 aa7□□□□□ -1.29
ERBB3-220ENST00000552691 ADAMTS12P58397 1594 aa6.99□□□□□ -1.29
ERBB3-220ENST00000552691 MAGI1Q96QZ7 1491 aaPredicted RBP6.99□□□□□ -1.29
ERBB3-220ENST00000552691 CARMIL1Q5VZK9 1371 aa6.99□□□□□ -1.29
ERBB3-220ENST00000552691 KIF21BO75037 1637 aa6.99□□□□□ -1.29
ERBB3-220ENST00000552691 PRXQ9BXM0 1461 aa6.98□□□□□ -1.29
ERBB3-220ENST00000552691 FHAD1B1AJZ9 1412 aa6.98□□□□□ -1.29
ERBB3-220ENST00000552691 RAPGEF2Q9Y4G8 1499 aa6.97□□□□□ -1.29
ERBB3-220ENST00000552691 CTTNBP2Q8WZ74 1663 aa6.96□□□□□ -1.29
ERBB3-220ENST00000552691 SYNJ2O15056 1496 aa6.96□□□□□ -1.3
ERBB3-220ENST00000552691 LOC105371045A0A1W2PR82 267 aa6.95□□□□□ -1.3
ERBB3-220ENST00000552691 CHMP7Q8WUX9 453 aaPredicted RBP6.95□□□□□ -1.3
ERBB3-220ENST00000552691 EHMT2Q96KQ7 1210 aa6.95□□□□□ -1.3
ERBB3-220ENST00000552691 GOLGA3Q08378 1498 aa6.94□□□□□ -1.3
ERBB3-220ENST00000552691 GRIN2AQ12879 1464 aa6.94□□□□□ -1.3
ERBB3-220ENST00000552691 FBLN2P98095 1184 aa6.94□□□□□ -1.3
ERBB3-220ENST00000552691 CEP170Q5SW79 1584 aa6.92□□□□□ -1.3
ERBB3-220ENST00000552691 UBTFP17480 764 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms