RNA–Protein interactions for RNA: ENST00000552642.5

TPCN1-221, Transcript of two pore segment channel 1, humanhuman

TSL 4

Gene TPCN1, Length 526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-221ENST00000552642 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
TPCN1-221ENST00000552642 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
TPCN1-221ENST00000552642 ABCC9O60706 1549 aa19.3■□□□□ 0.68
TPCN1-221ENST00000552642 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
TPCN1-221ENST00000552642 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
TPCN1-221ENST00000552642 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
TPCN1-221ENST00000552642 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
TPCN1-221ENST00000552642 NACADO15069 1562 aa18.78■□□□□ 0.6
TPCN1-221ENST00000552642 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
TPCN1-221ENST00000552642 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
TPCN1-221ENST00000552642 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
TPCN1-221ENST00000552642 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
TPCN1-221ENST00000552642 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
TPCN1-221ENST00000552642 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
TPCN1-221ENST00000552642 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
TPCN1-221ENST00000552642 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
TPCN1-221ENST00000552642 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
TPCN1-221ENST00000552642 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
TPCN1-221ENST00000552642 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
TPCN1-221ENST00000552642 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
TPCN1-221ENST00000552642 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
TPCN1-221ENST00000552642 WIZO95785 1651 aa17.5■□□□□ 0.39
TPCN1-221ENST00000552642 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
TPCN1-221ENST00000552642 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
TPCN1-221ENST00000552642 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
TPCN1-221ENST00000552642 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
TPCN1-221ENST00000552642 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
TPCN1-221ENST00000552642 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
TPCN1-221ENST00000552642 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
TPCN1-221ENST00000552642 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
TPCN1-221ENST00000552642 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
TPCN1-221ENST00000552642 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
TPCN1-221ENST00000552642 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
TPCN1-221ENST00000552642 CFTRP13569 1480 aa16.86■□□□□ 0.29
TPCN1-221ENST00000552642 NESP48681 1621 aa16.85■□□□□ 0.29
TPCN1-221ENST00000552642 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
TPCN1-221ENST00000552642 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
TPCN1-221ENST00000552642 FANCD2Q9BXW9 1451 aa16.68■□□□□ 0.26
TPCN1-221ENST00000552642 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
TPCN1-221ENST00000552642 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
TPCN1-221ENST00000552642 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
TPCN1-221ENST00000552642 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
TPCN1-221ENST00000552642 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
TPCN1-221ENST00000552642 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
TPCN1-221ENST00000552642 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
TPCN1-221ENST00000552642 CUX1P39880 1505 aa16.55■□□□□ 0.24
TPCN1-221ENST00000552642 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
TPCN1-221ENST00000552642 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
TPCN1-221ENST00000552642 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
TPCN1-221ENST00000552642 TOP2BQ02880 1626 aa16.48■□□□□ 0.23
TPCN1-221ENST00000552642 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
TPCN1-221ENST00000552642 TOPBP1Q92547 1522 aa16.48■□□□□ 0.23
TPCN1-221ENST00000552642 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
TPCN1-221ENST00000552642 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
TPCN1-221ENST00000552642 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
TPCN1-221ENST00000552642 WDR62O43379 1518 aa16.43■□□□□ 0.22
TPCN1-221ENST00000552642 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
TPCN1-221ENST00000552642 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
TPCN1-221ENST00000552642 CUX2O14529 1486 aa16.32■□□□□ 0.2
TPCN1-221ENST00000552642 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
TPCN1-221ENST00000552642 SOGA1O94964 1423 aa16.29■□□□□ 0.2
TPCN1-221ENST00000552642 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.19
TPCN1-221ENST00000552642 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
TPCN1-221ENST00000552642 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
TPCN1-221ENST00000552642 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
TPCN1-221ENST00000552642 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
TPCN1-221ENST00000552642 FAM9AQ8IZU1 332 aaPredicted RBP16.18■□□□□ 0.18
TPCN1-221ENST00000552642 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
TPCN1-221ENST00000552642 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
TPCN1-221ENST00000552642 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
TPCN1-221ENST00000552642 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
TPCN1-221ENST00000552642 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.173e-7■■■■■ 30.5
TPCN1-221ENST00000552642 EEA1Q15075 1411 aa16.12■□□□□ 0.17
TPCN1-221ENST00000552642 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
TPCN1-221ENST00000552642 EIF4G3O43432 1585 aaKnown RBP16.11■□□□□ 0.17
TPCN1-221ENST00000552642 IGF1RP08069 1367 aa16.08■□□□□ 0.16
TPCN1-221ENST00000552642 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
TPCN1-221ENST00000552642 PBRM1Q86U86 1689 aa16.06■□□□□ 0.16
TPCN1-221ENST00000552642 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
TPCN1-221ENST00000552642 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
TPCN1-221ENST00000552642 PRXQ9BXM0 1461 aa16■□□□□ 0.15
TPCN1-221ENST00000552642 SNAPC4Q5SXM2 1469 aa15.98■□□□□ 0.15
TPCN1-221ENST00000552642 CUL7Q14999 1698 aa15.98■□□□□ 0.15
TPCN1-221ENST00000552642 CARMIL1Q5VZK9 1371 aa15.98■□□□□ 0.15
TPCN1-221ENST00000552642 KIF21BO75037 1637 aa15.97■□□□□ 0.15
TPCN1-221ENST00000552642 ADAMTS12P58397 1594 aa15.96■□□□□ 0.15
TPCN1-221ENST00000552642 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
TPCN1-221ENST00000552642 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
TPCN1-221ENST00000552642 RAPGEF2Q9Y4G8 1499 aa15.96■□□□□ 0.14
TPCN1-221ENST00000552642 MAGI1Q96QZ7 1491 aaPredicted RBP15.94■□□□□ 0.14
TPCN1-221ENST00000552642 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
TPCN1-221ENST00000552642 GOLGA3Q08378 1498 aa15.91■□□□□ 0.14
TPCN1-221ENST00000552642 SYNJ2O15056 1496 aa15.89■□□□□ 0.13
TPCN1-221ENST00000552642 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
TPCN1-221ENST00000552642 CHD1O14646 1710 aa15.82■□□□□ 0.12
TPCN1-221ENST00000552642 UBTFP17480 764 aaKnown RBP15.82■□□□□ 0.12
TPCN1-221ENST00000552642 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
TPCN1-221ENST00000552642 FBLN2P98095 1184 aa15.81■□□□□ 0.12
TPCN1-221ENST00000552642 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
TPCN1-221ENST00000552642 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms