RNA–Protein interactions for RNA: ENST00000552630.1

PAN2-218, Transcript of poly(A) specific ribonuclease subunit PAN2, humanhuman

TSL 3

Gene PAN2, Length 625 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN2-218ENST00000552630 NISCHQ9Y2I1 1504 aa22.7■■□□□ 1.22
PAN2-218ENST00000552630 CCDC180Q9P1Z9 1646 aa20.37■□□□□ 0.85
PAN2-218ENST00000552630 ABCC9O60706 1549 aa20.24■□□□□ 0.83
PAN2-218ENST00000552630 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
PAN2-218ENST00000552630 NACADO15069 1562 aa19.26■□□□□ 0.67
PAN2-218ENST00000552630 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
PAN2-218ENST00000552630 DCAF8L2P0C7V8 631 aa19.01■□□□□ 0.63
PAN2-218ENST00000552630 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
PAN2-218ENST00000552630 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
PAN2-218ENST00000552630 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
PAN2-218ENST00000552630 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
PAN2-218ENST00000552630 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
PAN2-218ENST00000552630 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
PAN2-218ENST00000552630 BICRAQ9NZM4 1560 aa18.75■□□□□ 0.59
PAN2-218ENST00000552630 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
PAN2-218ENST00000552630 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
PAN2-218ENST00000552630 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
PAN2-218ENST00000552630 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
PAN2-218ENST00000552630 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
PAN2-218ENST00000552630 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
PAN2-218ENST00000552630 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
PAN2-218ENST00000552630 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
PAN2-218ENST00000552630 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
PAN2-218ENST00000552630 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
PAN2-218ENST00000552630 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
PAN2-218ENST00000552630 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
PAN2-218ENST00000552630 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
PAN2-218ENST00000552630 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
PAN2-218ENST00000552630 CUX2O14529 1486 aa17.52■□□□□ 0.4
PAN2-218ENST00000552630 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
PAN2-218ENST00000552630 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
PAN2-218ENST00000552630 DNAJC5Q9H3Z4 198 aa17.39■□□□□ 0.37
PAN2-218ENST00000552630 NESP48681 1621 aa17.39■□□□□ 0.37
PAN2-218ENST00000552630 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
PAN2-218ENST00000552630 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
PAN2-218ENST00000552630 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
PAN2-218ENST00000552630 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
PAN2-218ENST00000552630 WIZO95785 1651 aa17.2■□□□□ 0.34
PAN2-218ENST00000552630 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
PAN2-218ENST00000552630 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
PAN2-218ENST00000552630 MRC2Q9UBG0 1479 aa17.11■□□□□ 0.33
PAN2-218ENST00000552630 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
PAN2-218ENST00000552630 WDR62O43379 1518 aa17.06■□□□□ 0.32
PAN2-218ENST00000552630 CFTRP13569 1480 aa17.05■□□□□ 0.32
PAN2-218ENST00000552630 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
PAN2-218ENST00000552630 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
PAN2-218ENST00000552630 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
PAN2-218ENST00000552630 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
PAN2-218ENST00000552630 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
PAN2-218ENST00000552630 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
PAN2-218ENST00000552630 ABCC8Q09428 1581 aa16.71■□□□□ 0.27
PAN2-218ENST00000552630 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
PAN2-218ENST00000552630 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
PAN2-218ENST00000552630 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
PAN2-218ENST00000552630 ZNF608Q9ULD9 1512 aaPredicted RBP16.62■□□□□ 0.25
PAN2-218ENST00000552630 TRIM41Q8WV44 630 aa16.58■□□□□ 0.24
PAN2-218ENST00000552630 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
PAN2-218ENST00000552630 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
PAN2-218ENST00000552630 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.24
PAN2-218ENST00000552630 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.23
PAN2-218ENST00000552630 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
PAN2-218ENST00000552630 SOGA1O94964 1423 aa16.44■□□□□ 0.22
PAN2-218ENST00000552630 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
PAN2-218ENST00000552630 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
PAN2-218ENST00000552630 RIMBP3CA6NJZ7 1639 aa16.42■□□□□ 0.22
PAN2-218ENST00000552630 RIMBP3BA6NNM3 1639 aa16.42■□□□□ 0.22
PAN2-218ENST00000552630 RIMBP3Q9UFD9 1639 aa16.42■□□□□ 0.22
PAN2-218ENST00000552630 ARHGEF11O15085 1522 aa16.42■□□□□ 0.22
PAN2-218ENST00000552630 CUX1P39880 1505 aa16.4■□□□□ 0.22
PAN2-218ENST00000552630 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
PAN2-218ENST00000552630 CHD1O14646 1710 aa16.36■□□□□ 0.21
PAN2-218ENST00000552630 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
PAN2-218ENST00000552630 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
PAN2-218ENST00000552630 GRIN2BQ13224 1484 aa16.33■□□□□ 0.2
PAN2-218ENST00000552630 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
PAN2-218ENST00000552630 FBLN2P98095 1184 aa16.32■□□□□ 0.2
PAN2-218ENST00000552630 ABCA10Q8WWZ4 1543 aa16.28■□□□□ 0.2
PAN2-218ENST00000552630 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
PAN2-218ENST00000552630 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
PAN2-218ENST00000552630 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
PAN2-218ENST00000552630 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
PAN2-218ENST00000552630 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
PAN2-218ENST00000552630 ARAP1Q96P48 1450 aa16.25■□□□□ 0.19
PAN2-218ENST00000552630 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
PAN2-218ENST00000552630 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
PAN2-218ENST00000552630 CYB5RLQ6IPT4 315 aa16.22■□□□□ 0.19
PAN2-218ENST00000552630 WRNQ14191 1432 aaPredicted RBP eCLIP16.21■□□□□ 0.19
PAN2-218ENST00000552630 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
PAN2-218ENST00000552630 TOP2BQ02880 1626 aa16.18■□□□□ 0.18
PAN2-218ENST00000552630 BIVM-ERCC5R4GMW8 1640 aa16.17■□□□□ 0.18
PAN2-218ENST00000552630 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
PAN2-218ENST00000552630 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
PAN2-218ENST00000552630 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.16
PAN2-218ENST00000552630 NUP160Q12769 1436 aa16.08■□□□□ 0.16
PAN2-218ENST00000552630 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.16
PAN2-218ENST00000552630 TRHP20396 242 aaPredicted RBP16.02■□□□□ 0.16
PAN2-218ENST00000552630 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
PAN2-218ENST00000552630 SHROOM2Q13796 1616 aa15.97■□□□□ 0.15
PAN2-218ENST00000552630 PHF23Q9BUL5 403 aaPredicted RBP15.94■□□□□ 0.14
PAN2-218ENST00000552630 ERCC6L2Q5T890 1561 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms