RNA–Protein interactions for RNA: ENST00000552542.5

TPCN1-220, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-220ENST00000552542 NISCHQ9Y2I1 1504 aa34.69■■■■□ 3.14
TPCN1-220ENST00000552542 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
TPCN1-220ENST00000552542 ABCC9O60706 1549 aa29.66■■■□□ 2.34
TPCN1-220ENST00000552542 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
TPCN1-220ENST00000552542 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
TPCN1-220ENST00000552542 MYO15BQ96JP2 1530 aa28.76■■■□□ 2.19
TPCN1-220ENST00000552542 NACADO15069 1562 aa28.71■■■□□ 2.19
TPCN1-220ENST00000552542 DCAF8L2P0C7V8 631 aa28.63■■■□□ 2.17
TPCN1-220ENST00000552542 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
TPCN1-220ENST00000552542 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
TPCN1-220ENST00000552542 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
TPCN1-220ENST00000552542 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.03
TPCN1-220ENST00000552542 PABPN1Q86U42 306 aaKnown RBP eCLIP27.65■■■□□ 2.02
TPCN1-220ENST00000552542 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
TPCN1-220ENST00000552542 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
TPCN1-220ENST00000552542 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
TPCN1-220ENST00000552542 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
TPCN1-220ENST00000552542 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
TPCN1-220ENST00000552542 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
TPCN1-220ENST00000552542 CC2D2AQ9P2K1 1620 aa26.78■■□□□ 1.88
TPCN1-220ENST00000552542 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
TPCN1-220ENST00000552542 RSF1Q96T23 1441 aaPredicted RBP26.6■■□□□ 1.85
TPCN1-220ENST00000552542 SMARCA2P51531 1590 aa26.59■■□□□ 1.85
TPCN1-220ENST00000552542 PEG3Q9GZU2 1588 aa26.58■■□□□ 1.85
TPCN1-220ENST00000552542 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
TPCN1-220ENST00000552542 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
TPCN1-220ENST00000552542 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
TPCN1-220ENST00000552542 WIZO95785 1651 aa26.41■■□□□ 1.82
TPCN1-220ENST00000552542 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
TPCN1-220ENST00000552542 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
TPCN1-220ENST00000552542 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
TPCN1-220ENST00000552542 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
TPCN1-220ENST00000552542 LAMC3Q9Y6N6 1575 aa25.7■■□□□ 1.71
TPCN1-220ENST00000552542 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
TPCN1-220ENST00000552542 CFTRP13569 1480 aa25.66■■□□□ 1.7
TPCN1-220ENST00000552542 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
TPCN1-220ENST00000552542 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
TPCN1-220ENST00000552542 NESP48681 1621 aa25.53■■□□□ 1.68
TPCN1-220ENST00000552542 CUX2O14529 1486 aa25.52■■□□□ 1.68
TPCN1-220ENST00000552542 PDS5BQ9NTI5 1447 aa25.5■■□□□ 1.67
TPCN1-220ENST00000552542 DNAJC5Q9H3Z4 198 aa25.46■■□□□ 1.67
TPCN1-220ENST00000552542 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
TPCN1-220ENST00000552542 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
TPCN1-220ENST00000552542 KIF21AQ7Z4S6 1674 aa25.3■■□□□ 1.64
TPCN1-220ENST00000552542 MRC2Q9UBG0 1479 aa25.2■■□□□ 1.62
TPCN1-220ENST00000552542 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
TPCN1-220ENST00000552542 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
TPCN1-220ENST00000552542 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
TPCN1-220ENST00000552542 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
TPCN1-220ENST00000552542 WDR62O43379 1518 aa25.1■■□□□ 1.61
TPCN1-220ENST00000552542 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
TPCN1-220ENST00000552542 TOPBP1Q92547 1522 aa25.05■■□□□ 1.6
TPCN1-220ENST00000552542 CUX1P39880 1505 aa25.03■■□□□ 1.6
TPCN1-220ENST00000552542 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
TPCN1-220ENST00000552542 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
TPCN1-220ENST00000552542 SYNJ1O43426 1573 aa24.98■■□□□ 1.59
TPCN1-220ENST00000552542 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.57
TPCN1-220ENST00000552542 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
TPCN1-220ENST00000552542 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
TPCN1-220ENST00000552542 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
TPCN1-220ENST00000552542 IFT140Q96RY7 1462 aa24.81■■□□□ 1.56
TPCN1-220ENST00000552542 SOGA1O94964 1423 aa24.76■■□□□ 1.55
TPCN1-220ENST00000552542 TARBP1Q13395 1621 aaKnown RBP24.72■■□□□ 1.55
TPCN1-220ENST00000552542 WDR97A6NE52 1622 aa24.71■■□□□ 1.55
TPCN1-220ENST00000552542 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
TPCN1-220ENST00000552542 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
TPCN1-220ENST00000552542 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
TPCN1-220ENST00000552542 ABCA5Q8WWZ7 1642 aa24.56■■□□□ 1.52
TPCN1-220ENST00000552542 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
TPCN1-220ENST00000552542 EEA1Q15075 1411 aa24.53■■□□□ 1.52
TPCN1-220ENST00000552542 ZNF608Q9ULD9 1512 aaPredicted RBP24.53■■□□□ 1.52
TPCN1-220ENST00000552542 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
TPCN1-220ENST00000552542 TDRD9Q8NDG6 1382 aaKnown RBP24.51■■□□□ 1.51
TPCN1-220ENST00000552542 GRIN2BQ13224 1484 aa24.46■■□□□ 1.51
TPCN1-220ENST00000552542 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.51
TPCN1-220ENST00000552542 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.515e-7■■■■■ 27.6
TPCN1-220ENST00000552542 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
TPCN1-220ENST00000552542 OSCARQ8IYS5 282 aa24.42■■□□□ 1.5
TPCN1-220ENST00000552542 MAGI1Q96QZ7 1491 aaPredicted RBP24.38■■□□□ 1.49
TPCN1-220ENST00000552542 CUL7Q14999 1698 aa24.36■■□□□ 1.49
TPCN1-220ENST00000552542 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
TPCN1-220ENST00000552542 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
TPCN1-220ENST00000552542 IGF1RP08069 1367 aa24.3■■□□□ 1.48
TPCN1-220ENST00000552542 ADAMTS12P58397 1594 aa24.3■■□□□ 1.48
TPCN1-220ENST00000552542 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
TPCN1-220ENST00000552542 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
TPCN1-220ENST00000552542 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
TPCN1-220ENST00000552542 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
TPCN1-220ENST00000552542 CARMIL1Q5VZK9 1371 aa24.21■■□□□ 1.47
TPCN1-220ENST00000552542 PRXQ9BXM0 1461 aa24.2■■□□□ 1.47
TPCN1-220ENST00000552542 KIF21BO75037 1637 aa24.18■■□□□ 1.46
TPCN1-220ENST00000552542 RAPGEF2Q9Y4G8 1499 aa24.18■■□□□ 1.46
TPCN1-220ENST00000552542 GRIN2AQ12879 1464 aa24.14■■□□□ 1.46
TPCN1-220ENST00000552542 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
TPCN1-220ENST00000552542 GOLGA3Q08378 1498 aa24.1■■□□□ 1.45
TPCN1-220ENST00000552542 CHD1O14646 1710 aa24.08■■□□□ 1.45
TPCN1-220ENST00000552542 FBLN2P98095 1184 aa24.07■■□□□ 1.44
TPCN1-220ENST00000552542 RIMBP3CA6NJZ7 1639 aa24.05■■□□□ 1.44
TPCN1-220ENST00000552542 RIMBP3BA6NNM3 1639 aa24.05■■□□□ 1.44
TPCN1-220ENST00000552542 RIMBP3Q9UFD9 1639 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 220.2 ms