RNA–Protein interactions for RNA: ENST00000552314.1

RPL41-206, Transcript of ribosomal protein L41, humanhuman

TSL 2

Gene RPL41, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL41-206ENST00000552314 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
RPL41-206ENST00000552314 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
RPL41-206ENST00000552314 ABCC9O60706 1549 aa21.3■■□□□ 1
RPL41-206ENST00000552314 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
RPL41-206ENST00000552314 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
RPL41-206ENST00000552314 NACADO15069 1562 aa20.21■□□□□ 0.83
RPL41-206ENST00000552314 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
RPL41-206ENST00000552314 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
RPL41-206ENST00000552314 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
RPL41-206ENST00000552314 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.756e-9■□□□□ 10.5
RPL41-206ENST00000552314 DCAF1Q9Y4B6 1507 aa19.7■□□□□ 0.74
RPL41-206ENST00000552314 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
RPL41-206ENST00000552314 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
RPL41-206ENST00000552314 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.72
RPL41-206ENST00000552314 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
RPL41-206ENST00000552314 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
RPL41-206ENST00000552314 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
RPL41-206ENST00000552314 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
RPL41-206ENST00000552314 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
RPL41-206ENST00000552314 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
RPL41-206ENST00000552314 DNAJC5Q9H3Z4 198 aa18.65■□□□□ 0.58
RPL41-206ENST00000552314 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
RPL41-206ENST00000552314 HMGXB3Q12766 1538 aa18.55■□□□□ 0.56
RPL41-206ENST00000552314 CUX2O14529 1486 aa18.55■□□□□ 0.56
RPL41-206ENST00000552314 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
RPL41-206ENST00000552314 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
RPL41-206ENST00000552314 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
RPL41-206ENST00000552314 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
RPL41-206ENST00000552314 NESP48681 1621 aa18.33■□□□□ 0.52
RPL41-206ENST00000552314 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
RPL41-206ENST00000552314 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
RPL41-206ENST00000552314 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.52
RPL41-206ENST00000552314 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
RPL41-206ENST00000552314 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
RPL41-206ENST00000552314 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
RPL41-206ENST00000552314 PDS5BQ9NTI5 1447 aa18.04■□□□□ 0.48
RPL41-206ENST00000552314 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.47
RPL41-206ENST00000552314 WDR62O43379 1518 aa18■□□□□ 0.47
RPL41-206ENST00000552314 WIZO95785 1651 aa17.97■□□□□ 0.47
RPL41-206ENST00000552314 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
RPL41-206ENST00000552314 CHIC1Q5VXU3 224 aa17.9■□□□□ 0.46
RPL41-206ENST00000552314 CFTRP13569 1480 aa17.86■□□□□ 0.45
RPL41-206ENST00000552314 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
RPL41-206ENST00000552314 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
RPL41-206ENST00000552314 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
RPL41-206ENST00000552314 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
RPL41-206ENST00000552314 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
RPL41-206ENST00000552314 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
RPL41-206ENST00000552314 CCDC88BA6NC98 1476 aa17.54■□□□□ 0.4
RPL41-206ENST00000552314 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
RPL41-206ENST00000552314 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
RPL41-206ENST00000552314 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
RPL41-206ENST00000552314 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
RPL41-206ENST00000552314 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
RPL41-206ENST00000552314 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
RPL41-206ENST00000552314 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
RPL41-206ENST00000552314 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
RPL41-206ENST00000552314 TARBP1Q13395 1621 aaKnown RBP17.42■□□□□ 0.38
RPL41-206ENST00000552314 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
RPL41-206ENST00000552314 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
RPL41-206ENST00000552314 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
RPL41-206ENST00000552314 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
RPL41-206ENST00000552314 POLA1P09884 1462 aaPredicted RBP17.29■□□□□ 0.36
RPL41-206ENST00000552314 CHD1O14646 1710 aa17.28■□□□□ 0.36
RPL41-206ENST00000552314 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
RPL41-206ENST00000552314 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.358e-42■■■■■ 77.3
RPL41-206ENST00000552314 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
RPL41-206ENST00000552314 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
RPL41-206ENST00000552314 RAD54L2Q9Y4B4 1467 aa17.16■□□□□ 0.34
RPL41-206ENST00000552314 CUX1P39880 1505 aa17.15■□□□□ 0.34
RPL41-206ENST00000552314 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
RPL41-206ENST00000552314 SOGA1O94964 1423 aa17.11■□□□□ 0.33
RPL41-206ENST00000552314 MAGI1Q96QZ7 1491 aaPredicted RBP17.1■□□□□ 0.33
RPL41-206ENST00000552314 SNAPC4Q5SXM2 1469 aa17.08■□□□□ 0.32
RPL41-206ENST00000552314 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
RPL41-206ENST00000552314 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
RPL41-206ENST00000552314 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
RPL41-206ENST00000552314 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
RPL41-206ENST00000552314 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
RPL41-206ENST00000552314 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
RPL41-206ENST00000552314 PBRM1Q86U86 1689 aa17■□□□□ 0.31
RPL41-206ENST00000552314 ABCA10Q8WWZ4 1543 aa17■□□□□ 0.31
RPL41-206ENST00000552314 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
RPL41-206ENST00000552314 FBLN2P98095 1184 aa16.9■□□□□ 0.3
RPL41-206ENST00000552314 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
RPL41-206ENST00000552314 NUP160Q12769 1436 aa16.87■□□□□ 0.29
RPL41-206ENST00000552314 SHROOM2Q13796 1616 aa16.86■□□□□ 0.29
RPL41-206ENST00000552314 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
RPL41-206ENST00000552314 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
RPL41-206ENST00000552314 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
RPL41-206ENST00000552314 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
RPL41-206ENST00000552314 ERCC6L2Q5T890 1561 aa16.83■□□□□ 0.28
RPL41-206ENST00000552314 CEP170Q5SW79 1584 aa16.82■□□□□ 0.28
RPL41-206ENST00000552314 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
RPL41-206ENST00000552314 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
RPL41-206ENST00000552314 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
RPL41-206ENST00000552314 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
RPL41-206ENST00000552314 KIF13AQ9H1H9 1805 aa16.66■□□□□ 0.26
RPL41-206ENST00000552314 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
RPL41-206ENST00000552314 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms