RNA–Protein interactions for RNA: ENST00000552262.1

CDK17-210, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-210ENST00000552262 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
CDK17-210ENST00000552262 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
CDK17-210ENST00000552262 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.37
CDK17-210ENST00000552262 CCDC180Q9P1Z9 1646 aa22.61■■□□□ 1.21
CDK17-210ENST00000552262 ABCC9O60706 1549 aa22.04■■□□□ 1.12
CDK17-210ENST00000552262 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
CDK17-210ENST00000552262 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
CDK17-210ENST00000552262 RB1CC1Q8TDY2 1594 aa21.2■□□□□ 0.98
CDK17-210ENST00000552262 NACADO15069 1562 aa21.18■□□□□ 0.98
CDK17-210ENST00000552262 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
CDK17-210ENST00000552262 MYO15BQ96JP2 1530 aa21■□□□□ 0.95
CDK17-210ENST00000552262 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
CDK17-210ENST00000552262 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
CDK17-210ENST00000552262 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
CDK17-210ENST00000552262 PABPN1Q86U42 306 aaKnown RBP eCLIP20.64■□□□□ 0.89
CDK17-210ENST00000552262 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
CDK17-210ENST00000552262 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
CDK17-210ENST00000552262 BICRAQ9NZM4 1560 aa20.52■□□□□ 0.88
CDK17-210ENST00000552262 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
CDK17-210ENST00000552262 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
CDK17-210ENST00000552262 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
CDK17-210ENST00000552262 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
CDK17-210ENST00000552262 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
CDK17-210ENST00000552262 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
CDK17-210ENST00000552262 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.76
CDK17-210ENST00000552262 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.76
CDK17-210ENST00000552262 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
CDK17-210ENST00000552262 ATAD2BQ9ULI0 1458 aa19.62■□□□□ 0.73
CDK17-210ENST00000552262 WIZO95785 1651 aa19.61■□□□□ 0.73
CDK17-210ENST00000552262 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
CDK17-210ENST00000552262 BAZ1BQ9UIG0 1483 aaKnown RBP19.55■□□□□ 0.72
CDK17-210ENST00000552262 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
CDK17-210ENST00000552262 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
CDK17-210ENST00000552262 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
CDK17-210ENST00000552262 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
CDK17-210ENST00000552262 TOP2AP11388 1531 aaKnown RBP19.38■□□□□ 0.69
CDK17-210ENST00000552262 FOXD1Q16676 465 aa19.16■□□□□ 0.66
CDK17-210ENST00000552262 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
CDK17-210ENST00000552262 CCDC88BA6NC98 1476 aa19.13■□□□□ 0.65
CDK17-210ENST00000552262 NESP48681 1621 aa19.12■□□□□ 0.65
CDK17-210ENST00000552262 LAMC3Q9Y6N6 1575 aa19.01■□□□□ 0.63
CDK17-210ENST00000552262 CADPSQ9ULU8 1353 aa19■□□□□ 0.63
CDK17-210ENST00000552262 ERCC6Q03468 1493 aa19■□□□□ 0.63
CDK17-210ENST00000552262 CFTRP13569 1480 aa18.92■□□□□ 0.62
CDK17-210ENST00000552262 KIF21AQ7Z4S6 1674 aa18.9■□□□□ 0.62
CDK17-210ENST00000552262 PDS5BQ9NTI5 1447 aa18.88■□□□□ 0.61
CDK17-210ENST00000552262 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
CDK17-210ENST00000552262 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
CDK17-210ENST00000552262 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.6
CDK17-210ENST00000552262 THOC2Q8NI27 1593 aaKnown RBP18.73■□□□□ 0.59
CDK17-210ENST00000552262 MRC2Q9UBG0 1479 aa18.73■□□□□ 0.59
CDK17-210ENST00000552262 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.58
CDK17-210ENST00000552262 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
CDK17-210ENST00000552262 WDR62O43379 1518 aa18.62■□□□□ 0.57
CDK17-210ENST00000552262 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
CDK17-210ENST00000552262 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
CDK17-210ENST00000552262 CUX2O14529 1486 aa18.56■□□□□ 0.56
CDK17-210ENST00000552262 CUX1P39880 1505 aa18.54■□□□□ 0.56
CDK17-210ENST00000552262 WRNQ14191 1432 aaPredicted RBP eCLIP18.51■□□□□ 0.55
CDK17-210ENST00000552262 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
CDK17-210ENST00000552262 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
CDK17-210ENST00000552262 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
CDK17-210ENST00000552262 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
CDK17-210ENST00000552262 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
CDK17-210ENST00000552262 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
CDK17-210ENST00000552262 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
CDK17-210ENST00000552262 IFT140Q96RY7 1462 aa18.37■□□□□ 0.53
CDK17-210ENST00000552262 SOGA1O94964 1423 aa18.35■□□□□ 0.53
CDK17-210ENST00000552262 ADRA2BP18089 450 aa18.35■□□□□ 0.53
CDK17-210ENST00000552262 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
CDK17-210ENST00000552262 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
CDK17-210ENST00000552262 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
CDK17-210ENST00000552262 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
CDK17-210ENST00000552262 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.51
CDK17-210ENST00000552262 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
CDK17-210ENST00000552262 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.513e-15■■■■■ 54.4
CDK17-210ENST00000552262 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
CDK17-210ENST00000552262 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
CDK17-210ENST00000552262 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
CDK17-210ENST00000552262 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
CDK17-210ENST00000552262 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
CDK17-210ENST00000552262 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
CDK17-210ENST00000552262 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
CDK17-210ENST00000552262 FBLN2P98095 1184 aa18.08■□□□□ 0.48
CDK17-210ENST00000552262 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
CDK17-210ENST00000552262 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
CDK17-210ENST00000552262 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
CDK17-210ENST00000552262 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
CDK17-210ENST00000552262 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
CDK17-210ENST00000552262 CHD1O14646 1710 aa18■□□□□ 0.47
CDK17-210ENST00000552262 ERICH3Q5RHP9 1530 aa17.99■□□□□ 0.47
CDK17-210ENST00000552262 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
CDK17-210ENST00000552262 SYNJ2O15056 1496 aa17.95■□□□□ 0.46
CDK17-210ENST00000552262 FHAD1B1AJZ9 1412 aa17.93■□□□□ 0.46
CDK17-210ENST00000552262 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
CDK17-210ENST00000552262 CUL7Q14999 1698 aa17.93■□□□□ 0.46
CDK17-210ENST00000552262 IGF1RP08069 1367 aa17.92■□□□□ 0.46
CDK17-210ENST00000552262 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
CDK17-210ENST00000552262 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
CDK17-210ENST00000552262 EEA1Q15075 1411 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms