RNA–Protein interactions for RNA: ENST00000552255.5

MBD6-213, Transcript of methyl-CpG binding domain protein 6, humanhuman

TSL 4

Gene MBD6, Length 509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD6-213ENST00000552255 NISCHQ9Y2I1 1504 aa40.7■■■■■ 4.11
MBD6-213ENST00000552255 CCDC180Q9P1Z9 1646 aa36.47■■■■□ 3.43
MBD6-213ENST00000552255 ABCC9O60706 1549 aa36.07■■■■□ 3.36
MBD6-213ENST00000552255 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.12
MBD6-213ENST00000552255 NACADO15069 1562 aa34.4■■■■□ 3.1
MBD6-213ENST00000552255 DCAF8L2P0C7V8 631 aa34.16■■■■□ 3.06
MBD6-213ENST00000552255 MYO15BQ96JP2 1530 aa34.07■■■■□ 3.04
MBD6-213ENST00000552255 ZCCHC6Q5VYS8 1495 aaKnown RBP33.81■■■■□ 3
MBD6-213ENST00000552255 DCAF1Q9Y4B6 1507 aa33.71■■■□□ 2.99
MBD6-213ENST00000552255 UNC13AQ9UPW8 1703 aa33.69■■■□□ 2.98
MBD6-213ENST00000552255 PABPN1Q86U42 306 aaKnown RBP eCLIP33.59■■■□□ 2.97
MBD6-213ENST00000552255 DNAJC5BQ9UF47 199 aa33.49■■■□□ 2.95
MBD6-213ENST00000552255 BICRAQ9NZM4 1560 aa33.45■■■□□ 2.95
MBD6-213ENST00000552255 SHROOM4Q9ULL8 1493 aa33.21■■■□□ 2.91
MBD6-213ENST00000552255 SCRIBQ14160 1630 aa33.15■■■□□ 2.9
MBD6-213ENST00000552255 EIF4G1Q04637 1599 aaKnown RBP32.66■■■□□ 2.82
MBD6-213ENST00000552255 CC2D2AQ9P2K1 1620 aa32.63■■■□□ 2.81
MBD6-213ENST00000552255 CECR2Q9BXF3 1484 aa32.51■■■□□ 2.79
MBD6-213ENST00000552255 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
MBD6-213ENST00000552255 SMARCA4P51532 1647 aa31.7■■■□□ 2.66
MBD6-213ENST00000552255 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
MBD6-213ENST00000552255 SMARCA2P51531 1590 aa31.64■■■□□ 2.65
MBD6-213ENST00000552255 BAZ1AQ9NRL2 1556 aaPredicted RBP31.62■■■□□ 2.65
MBD6-213ENST00000552255 HMGXB3Q12766 1538 aa31.55■■■□□ 2.64
MBD6-213ENST00000552255 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
MBD6-213ENST00000552255 BAZ1BQ9UIG0 1483 aaKnown RBP31.39■■■□□ 2.62
MBD6-213ENST00000552255 MROH2BQ7Z745 1585 aa31.31■■■□□ 2.6
MBD6-213ENST00000552255 ERCC6Q03468 1493 aa31.2■■■□□ 2.58
MBD6-213ENST00000552255 CUX2O14529 1486 aa31.08■■■□□ 2.57
MBD6-213ENST00000552255 NESP48681 1621 aa31.04■■■□□ 2.56
MBD6-213ENST00000552255 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
MBD6-213ENST00000552255 WIZO95785 1651 aa30.95■■■□□ 2.55
MBD6-213ENST00000552255 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
MBD6-213ENST00000552255 RSF1Q96T23 1441 aaPredicted RBP30.79■■■□□ 2.52
MBD6-213ENST00000552255 CADPSQ9ULU8 1353 aa30.77■■■□□ 2.52
MBD6-213ENST00000552255 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
MBD6-213ENST00000552255 KIF21AQ7Z4S6 1674 aa30.7■■■□□ 2.5
MBD6-213ENST00000552255 DNAJC5Q9H3Z4 198 aa30.66■■■□□ 2.5
MBD6-213ENST00000552255 TOP2AP11388 1531 aaKnown RBP30.65■■■□□ 2.5
MBD6-213ENST00000552255 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
MBD6-213ENST00000552255 CFTRP13569 1480 aa30.48■■■□□ 2.47
MBD6-213ENST00000552255 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
MBD6-213ENST00000552255 WDR62O43379 1518 aa30.42■■■□□ 2.46
MBD6-213ENST00000552255 FANCD2Q9BXW9 1451 aa30.41■■■□□ 2.46
MBD6-213ENST00000552255 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
MBD6-213ENST00000552255 PRDM2Q13029 1718 aa30.24■■■□□ 2.43
MBD6-213ENST00000552255 URB2Q14146 1524 aaKnown RBP30.1■■■□□ 2.41
MBD6-213ENST00000552255 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
MBD6-213ENST00000552255 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
MBD6-213ENST00000552255 IFT140Q96RY7 1462 aa29.84■■■□□ 2.37
MBD6-213ENST00000552255 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
MBD6-213ENST00000552255 OSCARQ8IYS5 282 aa29.67■■■□□ 2.34
MBD6-213ENST00000552255 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
MBD6-213ENST00000552255 SUPT5HO00267 1087 aaKnown RBP29.59■■■□□ 2.33
MBD6-213ENST00000552255 EIF4G3O43432 1585 aaKnown RBP29.57■■■□□ 2.32
MBD6-213ENST00000552255 POLA1P09884 1462 aaPredicted RBP29.57■■■□□ 2.32
MBD6-213ENST00000552255 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
MBD6-213ENST00000552255 SOGA1O94964 1423 aa29.45■■■□□ 2.3
MBD6-213ENST00000552255 AQRO60306 1485 aaKnown RBP eCLIP29.44■■■□□ 2.36e-7■■■■■ 27.1
MBD6-213ENST00000552255 FGD5Q6ZNL6 1462 aa29.42■■■□□ 2.3
MBD6-213ENST00000552255 CUX1P39880 1505 aa29.42■■■□□ 2.3
MBD6-213ENST00000552255 WDR97A6NE52 1622 aa29.41■■■□□ 2.3
MBD6-213ENST00000552255 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
MBD6-213ENST00000552255 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
MBD6-213ENST00000552255 TDRD9Q8NDG6 1382 aaKnown RBP29.3■■■□□ 2.28
MBD6-213ENST00000552255 CHD1O14646 1710 aa29.28■■■□□ 2.28
MBD6-213ENST00000552255 RIMBP3CA6NJZ7 1639 aa29.22■■■□□ 2.27
MBD6-213ENST00000552255 RIMBP3BA6NNM3 1639 aa29.22■■■□□ 2.27
MBD6-213ENST00000552255 RIMBP3Q9UFD9 1639 aa29.22■■■□□ 2.27
MBD6-213ENST00000552255 FBLN2P98095 1184 aa29.21■■■□□ 2.27
MBD6-213ENST00000552255 GRIN2BQ13224 1484 aa29.19■■■□□ 2.26
MBD6-213ENST00000552255 SNAPC4Q5SXM2 1469 aa29.18■■■□□ 2.26
MBD6-213ENST00000552255 MAGI1Q96QZ7 1491 aaPredicted RBP29.18■■■□□ 2.26
MBD6-213ENST00000552255 ARHGEF11O15085 1522 aa29.17■■■□□ 2.26
MBD6-213ENST00000552255 ABCA10Q8WWZ4 1543 aa29.15■■■□□ 2.26
MBD6-213ENST00000552255 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
MBD6-213ENST00000552255 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
MBD6-213ENST00000552255 CHMP7Q8WUX9 453 aaPredicted RBP29.08■■■□□ 2.25
MBD6-213ENST00000552255 TOP2BQ02880 1626 aa29.08■■■□□ 2.25
MBD6-213ENST00000552255 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
MBD6-213ENST00000552255 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
MBD6-213ENST00000552255 SYNJ2O15056 1496 aa29.06■■■□□ 2.24
MBD6-213ENST00000552255 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
MBD6-213ENST00000552255 SYNJ1O43426 1573 aa29.04■■■□□ 2.24
MBD6-213ENST00000552255 CLASP1Q7Z460 1538 aa28.97■■■□□ 2.23
MBD6-213ENST00000552255 CYB5RLQ6IPT4 315 aa28.9■■■□□ 2.22
MBD6-213ENST00000552255 ARAP1Q96P48 1450 aa28.88■■■□□ 2.21
MBD6-213ENST00000552255 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
MBD6-213ENST00000552255 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
MBD6-213ENST00000552255 GRIN2AQ12879 1464 aa28.79■■■□□ 2.2
MBD6-213ENST00000552255 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
MBD6-213ENST00000552255 NUP160Q12769 1436 aa28.69■■■□□ 2.18
MBD6-213ENST00000552255 CEP170Q5SW79 1584 aa28.64■■■□□ 2.18
MBD6-213ENST00000552255 KIF27Q86VH2 1401 aa28.54■■■□□ 2.16
MBD6-213ENST00000552255 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
MBD6-213ENST00000552255 TRHP20396 242 aaPredicted RBP28.51■■■□□ 2.15
MBD6-213ENST00000552255 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.15
MBD6-213ENST00000552255 CUL7Q14999 1698 aa28.45■■■□□ 2.15
MBD6-213ENST00000552255 IGF1RP08069 1367 aa28.43■■■□□ 2.14
MBD6-213ENST00000552255 RUSC2Q8N2Y8 1516 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms