RNA–Protein interactions for RNA: ENST00000552142.5

ELK3-206, Transcript of ELK3, ETS transcription factor, humanhuman

TSL 5 BASIC

Gene ELK3, Length 1,242 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELK3-206ENST00000552142 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
ELK3-206ENST00000552142 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
ELK3-206ENST00000552142 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
ELK3-206ENST00000552142 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
ELK3-206ENST00000552142 FOXD1Q16676 465 aa19.18■□□□□ 0.66
ELK3-206ENST00000552142 NISCHQ9Y2I1 1504 aa18.8■□□□□ 0.6
ELK3-206ENST00000552142 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
ELK3-206ENST00000552142 MSH5O43196 834 aa17.96■□□□□ 0.47
ELK3-206ENST00000552142 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
ELK3-206ENST00000552142 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
ELK3-206ENST00000552142 PPP6R1Q9UPN7 881 aa17.84■□□□□ 0.45
ELK3-206ENST00000552142 ADRA2BP18089 450 aa17.75■□□□□ 0.43
ELK3-206ENST00000552142 ABCC9O60706 1549 aa17.49■□□□□ 0.39
ELK3-206ENST00000552142 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
ELK3-206ENST00000552142 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
ELK3-206ENST00000552142 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
ELK3-206ENST00000552142 MAPK8IP2Q13387 824 aaPredicted RBP16.37■□□□□ 0.21
ELK3-206ENST00000552142 NACADO15069 1562 aa16.28■□□□□ 0.2
ELK3-206ENST00000552142 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
ELK3-206ENST00000552142 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
ELK3-206ENST00000552142 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
ELK3-206ENST00000552142 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
ELK3-206ENST00000552142 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
ELK3-206ENST00000552142 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
ELK3-206ENST00000552142 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
ELK3-206ENST00000552142 CC2D2AQ9P2K1 1620 aa15.84■□□□□ 0.13
ELK3-206ENST00000552142 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
ELK3-206ENST00000552142 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
ELK3-206ENST00000552142 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
ELK3-206ENST00000552142 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
ELK3-206ENST00000552142 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
ELK3-206ENST00000552142 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
ELK3-206ENST00000552142 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
ELK3-206ENST00000552142 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
ELK3-206ENST00000552142 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
ELK3-206ENST00000552142 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
ELK3-206ENST00000552142 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
ELK3-206ENST00000552142 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
ELK3-206ENST00000552142 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
ELK3-206ENST00000552142 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
ELK3-206ENST00000552142 CUX2O14529 1486 aa15.33■□□□□ 0.05
ELK3-206ENST00000552142 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
ELK3-206ENST00000552142 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
ELK3-206ENST00000552142 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
ELK3-206ENST00000552142 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
ELK3-206ENST00000552142 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
ELK3-206ENST00000552142 NPM3O75607 178 aaKnown RBP14.93□□□□□ -0.02
ELK3-206ENST00000552142 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
ELK3-206ENST00000552142 NESP48681 1621 aa14.92□□□□□ -0.02
ELK3-206ENST00000552142 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
ELK3-206ENST00000552142 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
ELK3-206ENST00000552142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.04
ELK3-206ENST00000552142 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
ELK3-206ENST00000552142 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
ELK3-206ENST00000552142 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.04
ELK3-206ENST00000552142 TRIM41Q8WV44 630 aa14.77□□□□□ -0.05
ELK3-206ENST00000552142 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
ELK3-206ENST00000552142 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
ELK3-206ENST00000552142 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
ELK3-206ENST00000552142 WDR62O43379 1518 aa14.62□□□□□ -0.07
ELK3-206ENST00000552142 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
ELK3-206ENST00000552142 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
ELK3-206ENST00000552142 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
ELK3-206ENST00000552142 KCNA4P22459 653 aa14.49□□□□□ -0.09
ELK3-206ENST00000552142 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
ELK3-206ENST00000552142 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
ELK3-206ENST00000552142 RIMBP3CA6NJZ7 1639 aa14.43□□□□□ -0.1
ELK3-206ENST00000552142 RIMBP3BA6NNM3 1639 aa14.43□□□□□ -0.1
ELK3-206ENST00000552142 RIMBP3Q9UFD9 1639 aa14.43□□□□□ -0.1
ELK3-206ENST00000552142 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
ELK3-206ENST00000552142 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
ELK3-206ENST00000552142 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
ELK3-206ENST00000552142 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
ELK3-206ENST00000552142 CAPN15O75808 1086 aa14.33□□□□□ -0.12
ELK3-206ENST00000552142 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
ELK3-206ENST00000552142 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
ELK3-206ENST00000552142 DSG3P32926 999 aa14.32□□□□□ -0.12
ELK3-206ENST00000552142 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
ELK3-206ENST00000552142 WIZO95785 1651 aa14.29□□□□□ -0.12
ELK3-206ENST00000552142 CFTRP13569 1480 aa14.27□□□□□ -0.12
ELK3-206ENST00000552142 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
ELK3-206ENST00000552142 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
ELK3-206ENST00000552142 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
ELK3-206ENST00000552142 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
ELK3-206ENST00000552142 IFT140Q96RY7 1462 aa14.15□□□□□ -0.14
ELK3-206ENST00000552142 CHD1O14646 1710 aa14.12□□□□□ -0.15
ELK3-206ENST00000552142 TOP2AP11388 1531 aaKnown RBP14.1□□□□□ -0.15
ELK3-206ENST00000552142 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
ELK3-206ENST00000552142 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
ELK3-206ENST00000552142 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
ELK3-206ENST00000552142 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
ELK3-206ENST00000552142 APLP2Q06481 763 aa14.02□□□□□ -0.17
ELK3-206ENST00000552142 ABCB7O75027 752 aa14.01□□□□□ -0.17
ELK3-206ENST00000552142 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
ELK3-206ENST00000552142 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
ELK3-206ENST00000552142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
ELK3-206ENST00000552142 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
ELK3-206ENST00000552142 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
ELK3-206ENST00000552142 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
ELK3-206ENST00000552142 POTEHQ6S545 545 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms