RNA–Protein interactions for RNA: ENST00000551975.5

RORA-205, Transcript of RAR related orphan receptor A, humanhuman

TSL 3

Gene RORA, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-205ENST00000551975 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.53
RORA-205ENST00000551975 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
RORA-205ENST00000551975 ABCC9O60706 1549 aa21.91■■□□□ 1.1
RORA-205ENST00000551975 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
RORA-205ENST00000551975 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
RORA-205ENST00000551975 NACADO15069 1562 aa20.8■□□□□ 0.92
RORA-205ENST00000551975 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
RORA-205ENST00000551975 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
RORA-205ENST00000551975 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
RORA-205ENST00000551975 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
RORA-205ENST00000551975 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
RORA-205ENST00000551975 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
RORA-205ENST00000551975 BICRAQ9NZM4 1560 aa20.26■□□□□ 0.83
RORA-205ENST00000551975 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
RORA-205ENST00000551975 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
RORA-205ENST00000551975 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
RORA-205ENST00000551975 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
RORA-205ENST00000551975 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
RORA-205ENST00000551975 SMARCA4P51532 1647 aa19.24■□□□□ 0.67
RORA-205ENST00000551975 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
RORA-205ENST00000551975 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
RORA-205ENST00000551975 NCAPD3P42695 1498 aa19.14■□□□□ 0.65
RORA-205ENST00000551975 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
RORA-205ENST00000551975 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
RORA-205ENST00000551975 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
RORA-205ENST00000551975 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
RORA-205ENST00000551975 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
RORA-205ENST00000551975 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
RORA-205ENST00000551975 WIZO95785 1651 aa18.87■□□□□ 0.61
RORA-205ENST00000551975 NESP48681 1621 aa18.85■□□□□ 0.61
RORA-205ENST00000551975 LAMC3Q9Y6N6 1575 aa18.77■□□□□ 0.6
RORA-205ENST00000551975 CUX2O14529 1486 aa18.76■□□□□ 0.59
RORA-205ENST00000551975 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
RORA-205ENST00000551975 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
RORA-205ENST00000551975 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.57
RORA-205ENST00000551975 PDS5BQ9NTI5 1447 aa18.63■□□□□ 0.57
RORA-205ENST00000551975 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
RORA-205ENST00000551975 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
RORA-205ENST00000551975 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
RORA-205ENST00000551975 PRDM2Q13029 1718 aa18.47■□□□□ 0.55
RORA-205ENST00000551975 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.54
RORA-205ENST00000551975 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.54
RORA-205ENST00000551975 FANCD2Q9BXW9 1451 aa18.42■□□□□ 0.54
RORA-205ENST00000551975 CFTRP13569 1480 aa18.4■□□□□ 0.54
RORA-205ENST00000551975 WDR62O43379 1518 aa18.39■□□□□ 0.54
RORA-205ENST00000551975 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
RORA-205ENST00000551975 URB2Q14146 1524 aaKnown RBP18.24■□□□□ 0.51
RORA-205ENST00000551975 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
RORA-205ENST00000551975 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
RORA-205ENST00000551975 ABCC8Q09428 1581 aa18.08■□□□□ 0.48
RORA-205ENST00000551975 DNMBPQ6XZF7 1577 aa18.07■□□□□ 0.48
RORA-205ENST00000551975 IFT140Q96RY7 1462 aa18.04■□□□□ 0.48
RORA-205ENST00000551975 ZNF608Q9ULD9 1512 aaPredicted RBP17.98■□□□□ 0.47
RORA-205ENST00000551975 EIF4G3O43432 1585 aaKnown RBP17.97■□□□□ 0.47
RORA-205ENST00000551975 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
RORA-205ENST00000551975 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
RORA-205ENST00000551975 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
RORA-205ENST00000551975 POLA1P09884 1462 aaPredicted RBP17.9■□□□□ 0.46
RORA-205ENST00000551975 CHD1O14646 1710 aa17.89■□□□□ 0.45
RORA-205ENST00000551975 AQRO60306 1485 aaKnown RBP eCLIP17.87■□□□□ 0.45
RORA-205ENST00000551975 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
RORA-205ENST00000551975 SOGA1O94964 1423 aa17.85■□□□□ 0.45
RORA-205ENST00000551975 CUX1P39880 1505 aa17.85■□□□□ 0.45
RORA-205ENST00000551975 FGD5Q6ZNL6 1462 aa17.85■□□□□ 0.45
RORA-205ENST00000551975 FBLN2P98095 1184 aa17.8■□□□□ 0.44
RORA-205ENST00000551975 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
RORA-205ENST00000551975 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
RORA-205ENST00000551975 RIMBP3CA6NJZ7 1639 aa17.76■□□□□ 0.43
RORA-205ENST00000551975 RIMBP3BA6NNM3 1639 aa17.76■□□□□ 0.43
RORA-205ENST00000551975 RIMBP3Q9UFD9 1639 aa17.76■□□□□ 0.43
RORA-205ENST00000551975 PBRM1Q86U86 1689 aa17.76■□□□□ 0.43
RORA-205ENST00000551975 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
RORA-205ENST00000551975 BIVM-ERCC5R4GMW8 1640 aa17.68■□□□□ 0.42
RORA-205ENST00000551975 GRIN2BQ13224 1484 aa17.67■□□□□ 0.42
RORA-205ENST00000551975 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
RORA-205ENST00000551975 GAPVD1Q14C86 1478 aa17.65■□□□□ 0.42
RORA-205ENST00000551975 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
RORA-205ENST00000551975 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.41
RORA-205ENST00000551975 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
RORA-205ENST00000551975 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
RORA-205ENST00000551975 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
RORA-205ENST00000551975 ABCA5Q8WWZ7 1642 aa17.62■□□□□ 0.41
RORA-205ENST00000551975 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
RORA-205ENST00000551975 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
RORA-205ENST00000551975 CYB5RLQ6IPT4 315 aa17.56■□□□□ 0.4
RORA-205ENST00000551975 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
RORA-205ENST00000551975 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
RORA-205ENST00000551975 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
RORA-205ENST00000551975 GRIN2AQ12879 1464 aa17.44■□□□□ 0.38
RORA-205ENST00000551975 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
RORA-205ENST00000551975 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
RORA-205ENST00000551975 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
RORA-205ENST00000551975 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
RORA-205ENST00000551975 NUP160Q12769 1436 aa17.31■□□□□ 0.36
RORA-205ENST00000551975 ERCC6L2Q5T890 1561 aa17.3■□□□□ 0.36
RORA-205ENST00000551975 CUL7Q14999 1698 aa17.29■□□□□ 0.36
RORA-205ENST00000551975 KIF27Q86VH2 1401 aa17.29■□□□□ 0.36
RORA-205ENST00000551975 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
RORA-205ENST00000551975 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
RORA-205ENST00000551975 PRG4Q92954 1404 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms