RNA–Protein interactions for RNA: ENST00000551800.5

CDK4-209, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-209ENST00000551800 NISCHQ9Y2I1 1504 aa42.66■■■■■ 4.42
CDK4-209ENST00000551800 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
CDK4-209ENST00000551800 ABCC9O60706 1549 aa38.32■■■■□ 3.72
CDK4-209ENST00000551800 RB1CC1Q8TDY2 1594 aa36.61■■■■□ 3.45
CDK4-209ENST00000551800 NACADO15069 1562 aa36.27■■■■□ 3.4
CDK4-209ENST00000551800 DCAF8L2P0C7V8 631 aa36.04■■■■□ 3.36
CDK4-209ENST00000551800 UNC13AQ9UPW8 1703 aa35.95■■■■□ 3.35
CDK4-209ENST00000551800 MYO15BQ96JP2 1530 aa35.66■■■■□ 3.3
CDK4-209ENST00000551800 DNAJC5BQ9UF47 199 aa35.56■■■■□ 3.28
CDK4-209ENST00000551800 PABPN1Q86U42 306 aaKnown RBP eCLIP35.52■■■■□ 3.28
CDK4-209ENST00000551800 ZCCHC6Q5VYS8 1495 aaKnown RBP35.38■■■■□ 3.25
CDK4-209ENST00000551800 BICRAQ9NZM4 1560 aa35.36■■■■□ 3.25
CDK4-209ENST00000551800 DCAF1Q9Y4B6 1507 aa35.24■■■■□ 3.23
CDK4-209ENST00000551800 SCRIBQ14160 1630 aa35.08■■■■□ 3.21
CDK4-209ENST00000551800 SHROOM4Q9ULL8 1493 aa34.98■■■■□ 3.19
CDK4-209ENST00000551800 CC2D2AQ9P2K1 1620 aa34.69■■■■□ 3.14
CDK4-209ENST00000551800 EIF4G1Q04637 1599 aaKnown RBP34.59■■■■□ 3.13
CDK4-209ENST00000551800 CECR2Q9BXF3 1484 aa34.5■■■■□ 3.11
CDK4-209ENST00000551800 SMARCA4P51532 1647 aa33.42■■■□□ 2.94
CDK4-209ENST00000551800 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
CDK4-209ENST00000551800 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
CDK4-209ENST00000551800 HMGXB3Q12766 1538 aa33.26■■■□□ 2.91
CDK4-209ENST00000551800 ATAD2BQ9ULI0 1458 aa33.25■■■□□ 2.91
CDK4-209ENST00000551800 BAZ1AQ9NRL2 1556 aaPredicted RBP33.24■■■□□ 2.91
CDK4-209ENST00000551800 ERCC6Q03468 1493 aa33.21■■■□□ 2.91
CDK4-209ENST00000551800 BAZ1BQ9UIG0 1483 aaKnown RBP33.1■■■□□ 2.89
CDK4-209ENST00000551800 CUX2O14529 1486 aa33.05■■■□□ 2.88
CDK4-209ENST00000551800 PEG3Q9GZU2 1588 aa32.99■■■□□ 2.87
CDK4-209ENST00000551800 NESP48681 1621 aa32.87■■■□□ 2.85
CDK4-209ENST00000551800 MROH2BQ7Z745 1585 aa32.85■■■□□ 2.85
CDK4-209ENST00000551800 LAMC3Q9Y6N6 1575 aa32.8■■■□□ 2.84
CDK4-209ENST00000551800 DNAJC5Q9H3Z4 198 aa32.76■■■□□ 2.83
CDK4-209ENST00000551800 KIF21AQ7Z4S6 1674 aa32.74■■■□□ 2.83
CDK4-209ENST00000551800 THOC2Q8NI27 1593 aaKnown RBP32.68■■■□□ 2.82
CDK4-209ENST00000551800 WIZO95785 1651 aa32.62■■■□□ 2.81
CDK4-209ENST00000551800 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
CDK4-209ENST00000551800 CADPSQ9ULU8 1353 aa32.32■■■□□ 2.76
CDK4-209ENST00000551800 MRC2Q9UBG0 1479 aa32.25■■■□□ 2.75
CDK4-209ENST00000551800 CEP164Q9UPV0 1460 aa32.18■■■□□ 2.74
CDK4-209ENST00000551800 WDR62O43379 1518 aa32.17■■■□□ 2.74
CDK4-209ENST00000551800 TOP2AP11388 1531 aaKnown RBP32.17■■■□□ 2.74
CDK4-209ENST00000551800 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
CDK4-209ENST00000551800 RSF1Q96T23 1441 aaPredicted RBP32.09■■■□□ 2.73
CDK4-209ENST00000551800 FANCD2Q9BXW9 1451 aa32.06■■■□□ 2.72
CDK4-209ENST00000551800 CFTRP13569 1480 aa31.97■■■□□ 2.71
CDK4-209ENST00000551800 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
CDK4-209ENST00000551800 CCDC88BA6NC98 1476 aa31.66■■■□□ 2.66
CDK4-209ENST00000551800 TRIM41Q8WV44 630 aa31.56■■■□□ 2.64
CDK4-209ENST00000551800 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
CDK4-209ENST00000551800 TOPBP1Q92547 1522 aa31.45■■■□□ 2.63
CDK4-209ENST00000551800 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
CDK4-209ENST00000551800 DNMBPQ6XZF7 1577 aa31.44■■■□□ 2.62
CDK4-209ENST00000551800 OSCARQ8IYS5 282 aa31.41■■■□□ 2.62
CDK4-209ENST00000551800 EIF4G3O43432 1585 aaKnown RBP31.39■■■□□ 2.62
CDK4-209ENST00000551800 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
CDK4-209ENST00000551800 CHD1O14646 1710 aa31.28■■■□□ 2.6
CDK4-209ENST00000551800 RIMBP3CA6NJZ7 1639 aa31.22■■■□□ 2.59
CDK4-209ENST00000551800 RIMBP3BA6NNM3 1639 aa31.22■■■□□ 2.59
CDK4-209ENST00000551800 RIMBP3Q9UFD9 1639 aa31.22■■■□□ 2.59
CDK4-209ENST00000551800 TARBP1Q13395 1621 aaKnown RBP31.21■■■□□ 2.59
CDK4-209ENST00000551800 POLA1P09884 1462 aaPredicted RBP31.11■■■□□ 2.57
CDK4-209ENST00000551800 AQRO60306 1485 aaKnown RBP eCLIP31.04■■■□□ 2.56
CDK4-209ENST00000551800 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
CDK4-209ENST00000551800 WDR97A6NE52 1622 aa31.02■■■□□ 2.56
CDK4-209ENST00000551800 FGD5Q6ZNL6 1462 aa30.97■■■□□ 2.55
CDK4-209ENST00000551800 RAD54L2Q9Y4B4 1467 aa30.96■■■□□ 2.55
CDK4-209ENST00000551800 SOGA1O94964 1423 aa30.94■■■□□ 2.54
CDK4-209ENST00000551800 FBLN2P98095 1184 aa30.94■■■□□ 2.54
CDK4-209ENST00000551800 PBRM1Q86U86 1689 aa30.92■■■□□ 2.54
CDK4-209ENST00000551800 CUX1P39880 1505 aa30.9■■■□□ 2.54
CDK4-209ENST00000551800 SNAPC4Q5SXM2 1469 aa30.84■■■□□ 2.53
CDK4-209ENST00000551800 TDRD9Q8NDG6 1382 aaKnown RBP30.84■■■□□ 2.53
CDK4-209ENST00000551800 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
CDK4-209ENST00000551800 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
CDK4-209ENST00000551800 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.52
CDK4-209ENST00000551800 GRIN2BQ13224 1484 aa30.74■■■□□ 2.51
CDK4-209ENST00000551800 CYB5RLQ6IPT4 315 aa30.68■■■□□ 2.5
CDK4-209ENST00000551800 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
CDK4-209ENST00000551800 ARAP1Q96P48 1450 aa30.67■■■□□ 2.5
CDK4-209ENST00000551800 CLASP1Q7Z460 1538 aa30.66■■■□□ 2.5
CDK4-209ENST00000551800 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
CDK4-209ENST00000551800 SYNJ2O15056 1496 aa30.64■■■□□ 2.5
CDK4-209ENST00000551800 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
CDK4-209ENST00000551800 BIVM-ERCC5R4GMW8 1640 aa30.59■■■□□ 2.49
CDK4-209ENST00000551800 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.48
CDK4-209ENST00000551800 TOP2BQ02880 1626 aa30.51■■■□□ 2.48
CDK4-209ENST00000551800 TRHP20396 242 aaPredicted RBP30.49■■■□□ 2.47
CDK4-209ENST00000551800 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
CDK4-209ENST00000551800 ADAMTS12P58397 1594 aa30.44■■■□□ 2.46
CDK4-209ENST00000551800 GRIN2AQ12879 1464 aa30.35■■■□□ 2.45
CDK4-209ENST00000551800 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
CDK4-209ENST00000551800 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
CDK4-209ENST00000551800 FHAD1B1AJZ9 1412 aa30.21■■■□□ 2.43
CDK4-209ENST00000551800 SHROOM2Q13796 1616 aa30.17■■■□□ 2.42
CDK4-209ENST00000551800 ERCC6L2Q5T890 1561 aa30.15■■■□□ 2.42
CDK4-209ENST00000551800 NUP160Q12769 1436 aa30.14■■■□□ 2.42
CDK4-209ENST00000551800 RUSC2Q8N2Y8 1516 aa30.02■■■□□ 2.4
CDK4-209ENST00000551800 CUL7Q14999 1698 aa30■■■□□ 2.39
CDK4-209ENST00000551800 PRG4Q92954 1404 aaPredicted RBP29.91■■■□□ 2.38
CDK4-209ENST00000551800 KIF13AQ9H1H9 1805 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms