RNA–Protein interactions for RNA: ENST00000551747.1

CHERP-205, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-205ENST00000551747 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
CHERP-205ENST00000551747 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
CHERP-205ENST00000551747 ABCC9O60706 1549 aa27.73■■■□□ 2.03
CHERP-205ENST00000551747 RB1CC1Q8TDY2 1594 aa26.43■■□□□ 1.82
CHERP-205ENST00000551747 NACADO15069 1562 aa26.25■■□□□ 1.79
CHERP-205ENST00000551747 DNAJC5BQ9UF47 199 aa26.08■■□□□ 1.77
CHERP-205ENST00000551747 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
CHERP-205ENST00000551747 MYO15BQ96JP2 1530 aa25.93■■□□□ 1.74
CHERP-205ENST00000551747 UNC13AQ9UPW8 1703 aa25.87■■□□□ 1.73
CHERP-205ENST00000551747 PABPN1Q86U42 306 aaKnown RBP eCLIP25.78■■□□□ 1.72
CHERP-205ENST00000551747 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.71
CHERP-205ENST00000551747 ZCCHC6Q5VYS8 1495 aaKnown RBP25.62■■□□□ 1.69
CHERP-205ENST00000551747 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
CHERP-205ENST00000551747 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
CHERP-205ENST00000551747 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
CHERP-205ENST00000551747 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
CHERP-205ENST00000551747 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
CHERP-205ENST00000551747 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
CHERP-205ENST00000551747 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
CHERP-205ENST00000551747 NCAPD3P42695 1498 aa24.25■■□□□ 1.47
CHERP-205ENST00000551747 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
CHERP-205ENST00000551747 ATAD2BQ9ULI0 1458 aa24.14■■□□□ 1.46
CHERP-205ENST00000551747 SMARCA4P51532 1647 aa24.12■■□□□ 1.45
CHERP-205ENST00000551747 SMARCA2P51531 1590 aa24.08■■□□□ 1.44
CHERP-205ENST00000551747 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
CHERP-205ENST00000551747 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
CHERP-205ENST00000551747 DNAJC5Q9H3Z4 198 aa23.98■■□□□ 1.43
CHERP-205ENST00000551747 CUX2O14529 1486 aa23.97■■□□□ 1.43
CHERP-205ENST00000551747 PEG3Q9GZU2 1588 aa23.94■■□□□ 1.42
CHERP-205ENST00000551747 ERCC6Q03468 1493 aa23.92■■□□□ 1.42
CHERP-205ENST00000551747 BAZ1BQ9UIG0 1483 aaKnown RBP23.88■■□□□ 1.41
CHERP-205ENST00000551747 NESP48681 1621 aa23.84■■□□□ 1.41
CHERP-205ENST00000551747 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
CHERP-205ENST00000551747 LAMC3Q9Y6N6 1575 aa23.7■■□□□ 1.38
CHERP-205ENST00000551747 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
CHERP-205ENST00000551747 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
CHERP-205ENST00000551747 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
CHERP-205ENST00000551747 WIZO95785 1651 aa23.51■■□□□ 1.35
CHERP-205ENST00000551747 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
CHERP-205ENST00000551747 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
CHERP-205ENST00000551747 WDR62O43379 1518 aa23.31■■□□□ 1.32
CHERP-205ENST00000551747 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
CHERP-205ENST00000551747 CFTRP13569 1480 aa23.23■■□□□ 1.31
CHERP-205ENST00000551747 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
CHERP-205ENST00000551747 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
CHERP-205ENST00000551747 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
CHERP-205ENST00000551747 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
CHERP-205ENST00000551747 PRDM2Q13029 1718 aa23.01■■□□□ 1.27
CHERP-205ENST00000551747 CCDC88BA6NC98 1476 aa22.94■■□□□ 1.26
CHERP-205ENST00000551747 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
CHERP-205ENST00000551747 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
CHERP-205ENST00000551747 IFT140Q96RY7 1462 aa22.77■■□□□ 1.24
CHERP-205ENST00000551747 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
CHERP-205ENST00000551747 ZNF608Q9ULD9 1512 aaPredicted RBP22.74■■□□□ 1.23
CHERP-205ENST00000551747 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
CHERP-205ENST00000551747 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
CHERP-205ENST00000551747 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
CHERP-205ENST00000551747 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
CHERP-205ENST00000551747 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
CHERP-205ENST00000551747 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
CHERP-205ENST00000551747 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
CHERP-205ENST00000551747 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
CHERP-205ENST00000551747 AQRO60306 1485 aaKnown RBP eCLIP22.51■■□□□ 1.191e-6■■■■□ 26.1
CHERP-205ENST00000551747 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
CHERP-205ENST00000551747 CHD1O14646 1710 aa22.46■■□□□ 1.19
CHERP-205ENST00000551747 RAD54L2Q9Y4B4 1467 aa22.42■■□□□ 1.18
CHERP-205ENST00000551747 SOGA1O94964 1423 aa22.4■■□□□ 1.18
CHERP-205ENST00000551747 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
CHERP-205ENST00000551747 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
CHERP-205ENST00000551747 CUX1P39880 1505 aa22.36■■□□□ 1.17
CHERP-205ENST00000551747 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
CHERP-205ENST00000551747 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
CHERP-205ENST00000551747 FBLN2P98095 1184 aa22.28■■□□□ 1.16
CHERP-205ENST00000551747 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
CHERP-205ENST00000551747 CYB5RLQ6IPT4 315 aa22.25■■□□□ 1.15
CHERP-205ENST00000551747 MAGI1Q96QZ7 1491 aaPredicted RBP22.25■■□□□ 1.15
CHERP-205ENST00000551747 CLASP1Q7Z460 1538 aa22.23■■□□□ 1.15
CHERP-205ENST00000551747 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
CHERP-205ENST00000551747 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
CHERP-205ENST00000551747 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
CHERP-205ENST00000551747 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
CHERP-205ENST00000551747 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
CHERP-205ENST00000551747 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
CHERP-205ENST00000551747 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.13
CHERP-205ENST00000551747 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
CHERP-205ENST00000551747 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
CHERP-205ENST00000551747 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.12
CHERP-205ENST00000551747 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
CHERP-205ENST00000551747 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
CHERP-205ENST00000551747 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
CHERP-205ENST00000551747 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
CHERP-205ENST00000551747 ADAMTS12P58397 1594 aa21.95■■□□□ 1.1
CHERP-205ENST00000551747 NUP160Q12769 1436 aa21.9■■□□□ 1.1
CHERP-205ENST00000551747 CEP170Q5SW79 1584 aa21.89■■□□□ 1.09
CHERP-205ENST00000551747 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
CHERP-205ENST00000551747 FHAD1B1AJZ9 1412 aa21.86■■□□□ 1.09
CHERP-205ENST00000551747 ERCC6L2Q5T890 1561 aa21.86■■□□□ 1.09
CHERP-205ENST00000551747 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
CHERP-205ENST00000551747 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
CHERP-205ENST00000551747 PRG4Q92954 1404 aaPredicted RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms