RNA–Protein interactions for RNA: ENST00000551620.5

CCT2-212, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-212ENST00000551620 NISCHQ9Y2I1 1504 aa26.09■■□□□ 1.77
CCT2-212ENST00000551620 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
CCT2-212ENST00000551620 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
CCT2-212ENST00000551620 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
CCT2-212ENST00000551620 ABCC9O60706 1549 aa23.48■■□□□ 1.35
CCT2-212ENST00000551620 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
CCT2-212ENST00000551620 NACADO15069 1562 aa22.26■■□□□ 1.15
CCT2-212ENST00000551620 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
CCT2-212ENST00000551620 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
CCT2-212ENST00000551620 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
CCT2-212ENST00000551620 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
CCT2-212ENST00000551620 PABPN1Q86U42 306 aaKnown RBP eCLIP21.81■■□□□ 1.08
CCT2-212ENST00000551620 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
CCT2-212ENST00000551620 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
CCT2-212ENST00000551620 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
CCT2-212ENST00000551620 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
CCT2-212ENST00000551620 SHROOM4Q9ULL8 1493 aa21.59■■□□□ 1.05
CCT2-212ENST00000551620 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.05
CCT2-212ENST00000551620 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
CCT2-212ENST00000551620 CC2D2AQ9P2K1 1620 aa21.25■□□□□ 0.99
CCT2-212ENST00000551620 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
CCT2-212ENST00000551620 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
CCT2-212ENST00000551620 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
CCT2-212ENST00000551620 DNAJC5Q9H3Z4 198 aa20.53■□□□□ 0.88
CCT2-212ENST00000551620 CUX2O14529 1486 aa20.43■□□□□ 0.86
CCT2-212ENST00000551620 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
CCT2-212ENST00000551620 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
CCT2-212ENST00000551620 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
CCT2-212ENST00000551620 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
CCT2-212ENST00000551620 ERCC6Q03468 1493 aa20.32■□□□□ 0.84
CCT2-212ENST00000551620 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
CCT2-212ENST00000551620 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
CCT2-212ENST00000551620 FOXD1Q16676 465 aa20.21■□□□□ 0.83
CCT2-212ENST00000551620 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
CCT2-212ENST00000551620 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
CCT2-212ENST00000551620 NESP48681 1621 aa20.12■□□□□ 0.81
CCT2-212ENST00000551620 LAMC3Q9Y6N6 1575 aa20.1■□□□□ 0.81
CCT2-212ENST00000551620 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
CCT2-212ENST00000551620 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
CCT2-212ENST00000551620 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
CCT2-212ENST00000551620 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
CCT2-212ENST00000551620 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
CCT2-212ENST00000551620 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
CCT2-212ENST00000551620 WIZO95785 1651 aa19.75■□□□□ 0.75
CCT2-212ENST00000551620 WDR62O43379 1518 aa19.75■□□□□ 0.75
CCT2-212ENST00000551620 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
CCT2-212ENST00000551620 CFTRP13569 1480 aa19.66■□□□□ 0.74
CCT2-212ENST00000551620 FANCD2Q9BXW9 1451 aa19.62■□□□□ 0.73
CCT2-212ENST00000551620 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
CCT2-212ENST00000551620 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
CCT2-212ENST00000551620 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
CCT2-212ENST00000551620 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
CCT2-212ENST00000551620 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
CCT2-212ENST00000551620 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
CCT2-212ENST00000551620 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
CCT2-212ENST00000551620 IFT140Q96RY7 1462 aa19.32■□□□□ 0.68
CCT2-212ENST00000551620 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
CCT2-212ENST00000551620 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
CCT2-212ENST00000551620 ADRA2BP18089 450 aa19.25■□□□□ 0.67
CCT2-212ENST00000551620 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
CCT2-212ENST00000551620 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
CCT2-212ENST00000551620 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
CCT2-212ENST00000551620 RIMBP3CA6NJZ7 1639 aa19.13■□□□□ 0.65
CCT2-212ENST00000551620 RIMBP3BA6NNM3 1639 aa19.13■□□□□ 0.65
CCT2-212ENST00000551620 RIMBP3Q9UFD9 1639 aa19.13■□□□□ 0.65
CCT2-212ENST00000551620 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
CCT2-212ENST00000551620 ARHGEF11O15085 1522 aa19.09■□□□□ 0.65
CCT2-212ENST00000551620 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
CCT2-212ENST00000551620 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
CCT2-212ENST00000551620 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.646e-7■■■■■ 26.9
CCT2-212ENST00000551620 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
CCT2-212ENST00000551620 WDR97A6NE52 1622 aa19■□□□□ 0.63
CCT2-212ENST00000551620 SOGA1O94964 1423 aa18.96■□□□□ 0.63
CCT2-212ENST00000551620 CHD1O14646 1710 aa18.95■□□□□ 0.62
CCT2-212ENST00000551620 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
CCT2-212ENST00000551620 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
CCT2-212ENST00000551620 FBLN2P98095 1184 aa18.9■□□□□ 0.62
CCT2-212ENST00000551620 TDRD9Q8NDG6 1382 aaKnown RBP18.89■□□□□ 0.61
CCT2-212ENST00000551620 FGD5Q6ZNL6 1462 aa18.88■□□□□ 0.61
CCT2-212ENST00000551620 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
CCT2-212ENST00000551620 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
CCT2-212ENST00000551620 CUX1P39880 1505 aa18.84■□□□□ 0.61
CCT2-212ENST00000551620 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
CCT2-212ENST00000551620 GRIN2BQ13224 1484 aa18.83■□□□□ 0.6
CCT2-212ENST00000551620 CLASP1Q7Z460 1538 aa18.81■□□□□ 0.6
CCT2-212ENST00000551620 CHMP7Q8WUX9 453 aaPredicted RBP18.81■□□□□ 0.6
CCT2-212ENST00000551620 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
CCT2-212ENST00000551620 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
CCT2-212ENST00000551620 MSH5O43196 834 aa18.74■□□□□ 0.59
CCT2-212ENST00000551620 TRHP20396 242 aaPredicted RBP18.74■□□□□ 0.59
CCT2-212ENST00000551620 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
CCT2-212ENST00000551620 ABCA10Q8WWZ4 1543 aa18.72■□□□□ 0.59
CCT2-212ENST00000551620 PBRM1Q86U86 1689 aa18.67■□□□□ 0.58
CCT2-212ENST00000551620 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
CCT2-212ENST00000551620 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
CCT2-212ENST00000551620 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
CCT2-212ENST00000551620 TOP2BQ02880 1626 aa18.54■□□□□ 0.56
CCT2-212ENST00000551620 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
CCT2-212ENST00000551620 NUP160Q12769 1436 aa18.54■□□□□ 0.56
CCT2-212ENST00000551620 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms