RNA–Protein interactions for RNA: ENST00000551134.5

C12orf42-212, Transcript of chromosome 12 open reading frame 42, humanhuman

TSL 1 (best)

Gene C12orf42, Length 1,557 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-212ENST00000551134 NISCHQ9Y2I1 1504 aa42.67■■■■■ 4.42
C12orf42-212ENST00000551134 CCDC180Q9P1Z9 1646 aa38.01■■■■□ 3.68
C12orf42-212ENST00000551134 ABCC9O60706 1549 aa37.11■■■■□ 3.53
C12orf42-212ENST00000551134 RB1CC1Q8TDY2 1594 aa35.75■■■■□ 3.31
C12orf42-212ENST00000551134 NACADO15069 1562 aa35.71■■■■□ 3.31
C12orf42-212ENST00000551134 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.28
C12orf42-212ENST00000551134 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
C12orf42-212ENST00000551134 MYO15BQ96JP2 1530 aa35.51■■■■□ 3.28
C12orf42-212ENST00000551134 DCAF1Q9Y4B6 1507 aa35.34■■■■□ 3.25
C12orf42-212ENST00000551134 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
C12orf42-212ENST00000551134 BICRAQ9NZM4 1560 aa34.65■■■■□ 3.14
C12orf42-212ENST00000551134 PABPN1Q86U42 306 aaKnown RBP eCLIP34.63■■■■□ 3.13
C12orf42-212ENST00000551134 SCRIBQ14160 1630 aa34.61■■■■□ 3.13
C12orf42-212ENST00000551134 SHROOM4Q9ULL8 1493 aa34.33■■■■□ 3.09
C12orf42-212ENST00000551134 DNAJC5BQ9UF47 199 aa34.05■■■■□ 3.04
C12orf42-212ENST00000551134 EIF4G1Q04637 1599 aaKnown RBP33.74■■■□□ 2.99
C12orf42-212ENST00000551134 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
C12orf42-212ENST00000551134 CECR2Q9BXF3 1484 aa33.36■■■□□ 2.93
C12orf42-212ENST00000551134 SMARCA4P51532 1647 aa33.12■■■□□ 2.89
C12orf42-212ENST00000551134 BAZ1AQ9NRL2 1556 aaPredicted RBP33.09■■■□□ 2.89
C12orf42-212ENST00000551134 NCAPD3P42695 1498 aa32.92■■■□□ 2.86
C12orf42-212ENST00000551134 ATAD2BQ9ULI0 1458 aa32.92■■■□□ 2.86
C12orf42-212ENST00000551134 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
C12orf42-212ENST00000551134 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
C12orf42-212ENST00000551134 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
C12orf42-212ENST00000551134 HMGXB3Q12766 1538 aa32.78■■■□□ 2.84
C12orf42-212ENST00000551134 BAZ1BQ9UIG0 1483 aaKnown RBP32.66■■■□□ 2.82
C12orf42-212ENST00000551134 WIZO95785 1651 aa32.53■■■□□ 2.8
C12orf42-212ENST00000551134 RSF1Q96T23 1441 aaPredicted RBP32.47■■■□□ 2.79
C12orf42-212ENST00000551134 TOP2AP11388 1531 aaKnown RBP32.19■■■□□ 2.74
C12orf42-212ENST00000551134 NESP48681 1621 aa32.1■■■□□ 2.73
C12orf42-212ENST00000551134 LAMC3Q9Y6N6 1575 aa32.08■■■□□ 2.73
C12orf42-212ENST00000551134 ERCC6Q03468 1493 aa32■■■□□ 2.71
C12orf42-212ENST00000551134 CADPSQ9ULU8 1353 aa31.95■■■□□ 2.7
C12orf42-212ENST00000551134 PDS5BQ9NTI5 1447 aa31.84■■■□□ 2.69
C12orf42-212ENST00000551134 KIF21AQ7Z4S6 1674 aa31.79■■■□□ 2.68
C12orf42-212ENST00000551134 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
C12orf42-212ENST00000551134 CFTRP13569 1480 aa31.76■■■□□ 2.68
C12orf42-212ENST00000551134 CUX2O14529 1486 aa31.71■■■□□ 2.67
C12orf42-212ENST00000551134 THOC2Q8NI27 1593 aaKnown RBP31.68■■■□□ 2.66
C12orf42-212ENST00000551134 PRDM2Q13029 1718 aa31.63■■■□□ 2.65
C12orf42-212ENST00000551134 FANCD2Q9BXW9 1451 aa31.58■■■□□ 2.65
C12orf42-212ENST00000551134 SUPT5HO00267 1087 aaKnown RBP31.58■■■□□ 2.65
C12orf42-212ENST00000551134 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
C12orf42-212ENST00000551134 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
C12orf42-212ENST00000551134 WDR62O43379 1518 aa31.42■■■□□ 2.62
C12orf42-212ENST00000551134 URB2Q14146 1524 aaKnown RBP31.27■■■□□ 2.6
C12orf42-212ENST00000551134 ABCC8Q09428 1581 aa31.12■■■□□ 2.57
C12orf42-212ENST00000551134 TOPBP1Q92547 1522 aa31.09■■■□□ 2.57
C12orf42-212ENST00000551134 DNMBPQ6XZF7 1577 aa31.06■■■□□ 2.56
C12orf42-212ENST00000551134 IFT140Q96RY7 1462 aa30.9■■■□□ 2.54
C12orf42-212ENST00000551134 CUX1P39880 1505 aa30.84■■■□□ 2.53
C12orf42-212ENST00000551134 POLA1P09884 1462 aaPredicted RBP30.81■■■□□ 2.52
C12orf42-212ENST00000551134 TARBP1Q13395 1621 aaKnown RBP30.77■■■□□ 2.52
C12orf42-212ENST00000551134 ZNF608Q9ULD9 1512 aaPredicted RBP30.73■■■□□ 2.51
C12orf42-212ENST00000551134 FGD5Q6ZNL6 1462 aa30.73■■■□□ 2.51
C12orf42-212ENST00000551134 DNAJC5Q9H3Z4 198 aa30.71■■■□□ 2.51
C12orf42-212ENST00000551134 SOGA1O94964 1423 aa30.67■■■□□ 2.5
C12orf42-212ENST00000551134 RAD54L2Q9Y4B4 1467 aa30.66■■■□□ 2.5
C12orf42-212ENST00000551134 EIF4G3O43432 1585 aaKnown RBP30.65■■■□□ 2.5
C12orf42-212ENST00000551134 WRNQ14191 1432 aaPredicted RBP eCLIP30.63■■■□□ 2.49
C12orf42-212ENST00000551134 BIVM-ERCC5R4GMW8 1640 aa30.61■■■□□ 2.49
C12orf42-212ENST00000551134 TOP2BQ02880 1626 aa30.6■■■□□ 2.49
C12orf42-212ENST00000551134 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
C12orf42-212ENST00000551134 WDR97A6NE52 1622 aa30.56■■■□□ 2.48
C12orf42-212ENST00000551134 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.48
C12orf42-212ENST00000551134 TDRD9Q8NDG6 1382 aaKnown RBP30.48■■■□□ 2.47
C12orf42-212ENST00000551134 ABCA10Q8WWZ4 1543 aa30.46■■■□□ 2.47
C12orf42-212ENST00000551134 OSCARQ8IYS5 282 aa30.35■■■□□ 2.45
C12orf42-212ENST00000551134 ABCA5Q8WWZ7 1642 aa30.35■■■□□ 2.45
C12orf42-212ENST00000551134 GRIN2BQ13224 1484 aa30.33■■■□□ 2.45
C12orf42-212ENST00000551134 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
C12orf42-212ENST00000551134 PBRM1Q86U86 1689 aa30.32■■■□□ 2.44
C12orf42-212ENST00000551134 CHD1O14646 1710 aa30.29■■■□□ 2.44
C12orf42-212ENST00000551134 SNAPC4Q5SXM2 1469 aa30.29■■■□□ 2.44
C12orf42-212ENST00000551134 MAGI1Q96QZ7 1491 aaPredicted RBP30.28■■■□□ 2.44
C12orf42-212ENST00000551134 FBLN2P98095 1184 aa30.16■■■□□ 2.42
C12orf42-212ENST00000551134 SYNJ2O15056 1496 aa30.15■■■□□ 2.42
C12orf42-212ENST00000551134 CHMP7Q8WUX9 453 aaPredicted RBP30.11■■■□□ 2.41
C12orf42-212ENST00000551134 ERICH3Q5RHP9 1530 aa30.1■■■□□ 2.41
C12orf42-212ENST00000551134 ADAMTS12P58397 1594 aa30.05■■■□□ 2.4
C12orf42-212ENST00000551134 KIF27Q86VH2 1401 aa29.99■■■□□ 2.39
C12orf42-212ENST00000551134 FHAD1B1AJZ9 1412 aa29.99■■■□□ 2.39
C12orf42-212ENST00000551134 GRIN2AQ12879 1464 aa29.95■■■□□ 2.38
C12orf42-212ENST00000551134 CLASP1Q7Z460 1538 aa29.94■■■□□ 2.38
C12orf42-212ENST00000551134 RIMBP3CA6NJZ7 1639 aa29.9■■■□□ 2.38
C12orf42-212ENST00000551134 RIMBP3BA6NNM3 1639 aa29.9■■■□□ 2.38
C12orf42-212ENST00000551134 RIMBP3Q9UFD9 1639 aa29.9■■■□□ 2.38
C12orf42-212ENST00000551134 ARHGEF11O15085 1522 aa29.87■■■□□ 2.37
C12orf42-212ENST00000551134 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
C12orf42-212ENST00000551134 IGF1RP08069 1367 aa29.85■■■□□ 2.37
C12orf42-212ENST00000551134 CUL7Q14999 1698 aa29.85■■■□□ 2.37
C12orf42-212ENST00000551134 NUP160Q12769 1436 aa29.82■■■□□ 2.36
C12orf42-212ENST00000551134 CEP170Q5SW79 1584 aa29.8■■■□□ 2.36
C12orf42-212ENST00000551134 CARMIL1Q5VZK9 1371 aa29.69■■■□□ 2.34
C12orf42-212ENST00000551134 RUSC2Q8N2Y8 1516 aa29.69■■■□□ 2.34
C12orf42-212ENST00000551134 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
C12orf42-212ENST00000551134 ARAP1Q96P48 1450 aa29.63■■■□□ 2.33
C12orf42-212ENST00000551134 CYB5RLQ6IPT4 315 aa29.56■■■□□ 2.32
C12orf42-212ENST00000551134 KIAA0586Q9BVV6 1533 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms