RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
PFDN5-213ENST00000550964 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
PFDN5-213ENST00000550964 ABCC9O60706 1549 aa20.78■□□□□ 0.92
PFDN5-213ENST00000550964 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
PFDN5-213ENST00000550964 NACADO15069 1562 aa20.18■□□□□ 0.82
PFDN5-213ENST00000550964 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
PFDN5-213ENST00000550964 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
PFDN5-213ENST00000550964 ZCCHC6Q5VYS8 1495 aaKnown RBP20.04■□□□□ 0.8
PFDN5-213ENST00000550964 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.79
PFDN5-213ENST00000550964 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
PFDN5-213ENST00000550964 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
PFDN5-213ENST00000550964 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
PFDN5-213ENST00000550964 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
PFDN5-213ENST00000550964 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
PFDN5-213ENST00000550964 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
PFDN5-213ENST00000550964 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
PFDN5-213ENST00000550964 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
PFDN5-213ENST00000550964 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
PFDN5-213ENST00000550964 CECR2Q9BXF3 1484 aa18.72■□□□□ 0.59
PFDN5-213ENST00000550964 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
PFDN5-213ENST00000550964 SMARCA2P51531 1590 aa18.63■□□□□ 0.57
PFDN5-213ENST00000550964 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
PFDN5-213ENST00000550964 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
PFDN5-213ENST00000550964 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.56
PFDN5-213ENST00000550964 HMGXB3Q12766 1538 aa18.51■□□□□ 0.55
PFDN5-213ENST00000550964 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
PFDN5-213ENST00000550964 BAZ1BQ9UIG0 1483 aaKnown RBP18.43■□□□□ 0.54
PFDN5-213ENST00000550964 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
PFDN5-213ENST00000550964 WIZO95785 1651 aa18.29■□□□□ 0.52
PFDN5-213ENST00000550964 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
PFDN5-213ENST00000550964 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
PFDN5-213ENST00000550964 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
PFDN5-213ENST00000550964 CADPSQ9ULU8 1353 aa18.01■□□□□ 0.47
PFDN5-213ENST00000550964 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
PFDN5-213ENST00000550964 NESP48681 1621 aa17.94■□□□□ 0.46
PFDN5-213ENST00000550964 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
PFDN5-213ENST00000550964 CCDC88BA6NC98 1476 aa17.9■□□□□ 0.46
PFDN5-213ENST00000550964 CFTRP13569 1480 aa17.9■□□□□ 0.46
PFDN5-213ENST00000550964 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
PFDN5-213ENST00000550964 CUX2O14529 1486 aa17.85■□□□□ 0.45
PFDN5-213ENST00000550964 KIF21AQ7Z4S6 1674 aa17.85■□□□□ 0.45
PFDN5-213ENST00000550964 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
PFDN5-213ENST00000550964 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
PFDN5-213ENST00000550964 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
PFDN5-213ENST00000550964 THOC2Q8NI27 1593 aaKnown RBP17.75■□□□□ 0.43
PFDN5-213ENST00000550964 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
PFDN5-213ENST00000550964 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
PFDN5-213ENST00000550964 WDR62O43379 1518 aa17.67■□□□□ 0.42
PFDN5-213ENST00000550964 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
PFDN5-213ENST00000550964 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
PFDN5-213ENST00000550964 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
PFDN5-213ENST00000550964 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
PFDN5-213ENST00000550964 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
PFDN5-213ENST00000550964 CUX1P39880 1505 aa17.33■□□□□ 0.37
PFDN5-213ENST00000550964 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
PFDN5-213ENST00000550964 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.363e-8■□□□□ 9.6
PFDN5-213ENST00000550964 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
PFDN5-213ENST00000550964 SOGA1O94964 1423 aa17.3■□□□□ 0.36
PFDN5-213ENST00000550964 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
PFDN5-213ENST00000550964 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
PFDN5-213ENST00000550964 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
PFDN5-213ENST00000550964 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
PFDN5-213ENST00000550964 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
PFDN5-213ENST00000550964 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
PFDN5-213ENST00000550964 RAD54L2Q9Y4B4 1467 aa17.19■□□□□ 0.34
PFDN5-213ENST00000550964 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
PFDN5-213ENST00000550964 AQRO60306 1485 aaKnown RBP eCLIP17.14■□□□□ 0.332e-13■■□□□ 12.6
PFDN5-213ENST00000550964 GRIN2BQ13224 1484 aa17.13■□□□□ 0.33
PFDN5-213ENST00000550964 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
PFDN5-213ENST00000550964 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
PFDN5-213ENST00000550964 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
PFDN5-213ENST00000550964 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
PFDN5-213ENST00000550964 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
PFDN5-213ENST00000550964 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
PFDN5-213ENST00000550964 ERICH3Q5RHP9 1530 aa17.03■□□□□ 0.32
PFDN5-213ENST00000550964 CHD1O14646 1710 aa17.03■□□□□ 0.32
PFDN5-213ENST00000550964 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
PFDN5-213ENST00000550964 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.32
PFDN5-213ENST00000550964 KIF27Q86VH2 1401 aa17.01■□□□□ 0.31
PFDN5-213ENST00000550964 SYNJ2O15056 1496 aa17■□□□□ 0.31
PFDN5-213ENST00000550964 FBLN2P98095 1184 aa16.99■□□□□ 0.31
PFDN5-213ENST00000550964 TRIM41Q8WV44 630 aa16.98■□□□□ 0.31
PFDN5-213ENST00000550964 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
PFDN5-213ENST00000550964 CUL7Q14999 1698 aa16.93■□□□□ 0.3
PFDN5-213ENST00000550964 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
PFDN5-213ENST00000550964 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
PFDN5-213ENST00000550964 IGF1RP08069 1367 aa16.83■□□□□ 0.28
PFDN5-213ENST00000550964 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
PFDN5-213ENST00000550964 EEA1Q15075 1411 aa16.79■□□□□ 0.28
PFDN5-213ENST00000550964 NUP160Q12769 1436 aa16.79■□□□□ 0.28
PFDN5-213ENST00000550964 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
PFDN5-213ENST00000550964 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.28
PFDN5-213ENST00000550964 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
PFDN5-213ENST00000550964 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
PFDN5-213ENST00000550964 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
PFDN5-213ENST00000550964 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
PFDN5-213ENST00000550964 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
PFDN5-213ENST00000550964 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
PFDN5-213ENST00000550964 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
PFDN5-213ENST00000550964 KIAA0586Q9BVV6 1533 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms