RNA–Protein interactions for RNA: ENST00000550301.1

AC025259.1-201, humanhuman

TSL 3 BASIC

Gene AC025259.1, Length 647 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025259.1-201ENST00000550301 NISCHQ9Y2I1 1504 aa31.57■■■□□ 2.64
AC025259.1-201ENST00000550301 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
AC025259.1-201ENST00000550301 ABCC9O60706 1549 aa27.29■■□□□ 1.96
AC025259.1-201ENST00000550301 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
AC025259.1-201ENST00000550301 NACADO15069 1562 aa26.36■■□□□ 1.81
AC025259.1-201ENST00000550301 ZCCHC6Q5VYS8 1495 aaKnown RBP26.32■■□□□ 1.8
AC025259.1-201ENST00000550301 DCAF8L2P0C7V8 631 aa26.31■■□□□ 1.8
AC025259.1-201ENST00000550301 MYO15BQ96JP2 1530 aa26.26■■□□□ 1.79
AC025259.1-201ENST00000550301 DCAF1Q9Y4B6 1507 aa26.18■■□□□ 1.78
AC025259.1-201ENST00000550301 UNC13AQ9UPW8 1703 aa25.65■■□□□ 1.7
AC025259.1-201ENST00000550301 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
AC025259.1-201ENST00000550301 PABPN1Q86U42 306 aaKnown RBP eCLIP25.5■■□□□ 1.67
AC025259.1-201ENST00000550301 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
AC025259.1-201ENST00000550301 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
AC025259.1-201ENST00000550301 DNAJC5BQ9UF47 199 aa24.88■■□□□ 1.57
AC025259.1-201ENST00000550301 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
AC025259.1-201ENST00000550301 CC2D2AQ9P2K1 1620 aa24.69■■□□□ 1.54
AC025259.1-201ENST00000550301 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
AC025259.1-201ENST00000550301 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
AC025259.1-201ENST00000550301 SMARCA4P51532 1647 aa24.47■■□□□ 1.51
AC025259.1-201ENST00000550301 SMARCA2P51531 1590 aa24.33■■□□□ 1.49
AC025259.1-201ENST00000550301 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
AC025259.1-201ENST00000550301 ATAD2BQ9ULI0 1458 aa24.31■■□□□ 1.48
AC025259.1-201ENST00000550301 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
AC025259.1-201ENST00000550301 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
AC025259.1-201ENST00000550301 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
AC025259.1-201ENST00000550301 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
AC025259.1-201ENST00000550301 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.44
AC025259.1-201ENST00000550301 WIZO95785 1651 aa24.02■■□□□ 1.44
AC025259.1-201ENST00000550301 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
AC025259.1-201ENST00000550301 LAMC3Q9Y6N6 1575 aa23.66■■□□□ 1.38
AC025259.1-201ENST00000550301 NESP48681 1621 aa23.62■■□□□ 1.37
AC025259.1-201ENST00000550301 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
AC025259.1-201ENST00000550301 ERCC6Q03468 1493 aa23.57■■□□□ 1.36
AC025259.1-201ENST00000550301 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
AC025259.1-201ENST00000550301 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
AC025259.1-201ENST00000550301 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
AC025259.1-201ENST00000550301 CFTRP13569 1480 aa23.48■■□□□ 1.35
AC025259.1-201ENST00000550301 KIF21AQ7Z4S6 1674 aa23.35■■□□□ 1.33
AC025259.1-201ENST00000550301 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
AC025259.1-201ENST00000550301 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
AC025259.1-201ENST00000550301 CUX2O14529 1486 aa23.3■■□□□ 1.32
AC025259.1-201ENST00000550301 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
AC025259.1-201ENST00000550301 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
AC025259.1-201ENST00000550301 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
AC025259.1-201ENST00000550301 WDR62O43379 1518 aa23.16■■□□□ 1.3
AC025259.1-201ENST00000550301 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
AC025259.1-201ENST00000550301 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
AC025259.1-201ENST00000550301 DNMBPQ6XZF7 1577 aa22.95■■□□□ 1.26
AC025259.1-201ENST00000550301 TOPBP1Q92547 1522 aa22.95■■□□□ 1.26
AC025259.1-201ENST00000550301 IFT140Q96RY7 1462 aa22.82■■□□□ 1.24
AC025259.1-201ENST00000550301 CUX1P39880 1505 aa22.8■■□□□ 1.24
AC025259.1-201ENST00000550301 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
AC025259.1-201ENST00000550301 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
AC025259.1-201ENST00000550301 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
AC025259.1-201ENST00000550301 SOGA1O94964 1423 aa22.69■■□□□ 1.22
AC025259.1-201ENST00000550301 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
AC025259.1-201ENST00000550301 TOP2BQ02880 1626 aa22.66■■□□□ 1.22
AC025259.1-201ENST00000550301 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.22
AC025259.1-201ENST00000550301 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
AC025259.1-201ENST00000550301 RAD54L2Q9Y4B4 1467 aa22.63■■□□□ 1.21
AC025259.1-201ENST00000550301 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
AC025259.1-201ENST00000550301 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
AC025259.1-201ENST00000550301 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
AC025259.1-201ENST00000550301 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.2
AC025259.1-201ENST00000550301 ABCA10Q8WWZ4 1543 aa22.52■■□□□ 1.2
AC025259.1-201ENST00000550301 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
AC025259.1-201ENST00000550301 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
AC025259.1-201ENST00000550301 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
AC025259.1-201ENST00000550301 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
AC025259.1-201ENST00000550301 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
AC025259.1-201ENST00000550301 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
AC025259.1-201ENST00000550301 SNAPC4Q5SXM2 1469 aa22.35■■□□□ 1.17
AC025259.1-201ENST00000550301 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
AC025259.1-201ENST00000550301 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
AC025259.1-201ENST00000550301 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
AC025259.1-201ENST00000550301 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
AC025259.1-201ENST00000550301 FBLN2P98095 1184 aa22.27■■□□□ 1.16
AC025259.1-201ENST00000550301 TRIM41Q8WV44 630 aa22.27■■□□□ 1.16
AC025259.1-201ENST00000550301 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
AC025259.1-201ENST00000550301 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
AC025259.1-201ENST00000550301 CHD1O14646 1710 aa22.25■■□□□ 1.15
AC025259.1-201ENST00000550301 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
AC025259.1-201ENST00000550301 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
AC025259.1-201ENST00000550301 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
AC025259.1-201ENST00000550301 IGF1RP08069 1367 aa22.12■■□□□ 1.13
AC025259.1-201ENST00000550301 CUL7Q14999 1698 aa22.11■■□□□ 1.13
AC025259.1-201ENST00000550301 CLASP1Q7Z460 1538 aa22.05■■□□□ 1.12
AC025259.1-201ENST00000550301 NUP160Q12769 1436 aa22.01■■□□□ 1.11
AC025259.1-201ENST00000550301 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
AC025259.1-201ENST00000550301 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
AC025259.1-201ENST00000550301 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
AC025259.1-201ENST00000550301 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
AC025259.1-201ENST00000550301 EEA1Q15075 1411 aa21.95■■□□□ 1.1
AC025259.1-201ENST00000550301 ARHGEF11O15085 1522 aa21.94■■□□□ 1.1
AC025259.1-201ENST00000550301 RIMBP3CA6NJZ7 1639 aa21.92■■□□□ 1.1
AC025259.1-201ENST00000550301 RIMBP3BA6NNM3 1639 aa21.92■■□□□ 1.1
AC025259.1-201ENST00000550301 RIMBP3Q9UFD9 1639 aa21.92■■□□□ 1.1
AC025259.1-201ENST00000550301 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
AC025259.1-201ENST00000550301 CSRNP3Q8WYN3 585 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms