RNA–Protein interactions for RNA: ENST00000550091.5

FGD4-214, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 4

Gene FGD4, Length 549 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-214ENST00000550091 AEBP2Q6ZN18 517 aaPredicted RBP19.7■□□□□ 0.74
FGD4-214ENST00000550091 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
FGD4-214ENST00000550091 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
FGD4-214ENST00000550091 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
FGD4-214ENST00000550091 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
FGD4-214ENST00000550091 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.09
FGD4-214ENST00000550091 FOXD1Q16676 465 aa15.54■□□□□ 0.08
FGD4-214ENST00000550091 ABCC9O60706 1549 aa15.44■□□□□ 0.06
FGD4-214ENST00000550091 CCDC180Q9P1Z9 1646 aa15.07■□□□□ 0
FGD4-214ENST00000550091 DNAJC5BQ9UF47 199 aa14.99□□□□□ -0.01
FGD4-214ENST00000550091 ADRA2BP18089 450 aa14.87□□□□□ -0.03
FGD4-214ENST00000550091 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
FGD4-214ENST00000550091 PIAS4Q8N2W9 510 aaPredicted RBP14.67□□□□□ -0.06
FGD4-214ENST00000550091 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
FGD4-214ENST00000550091 MSH5O43196 834 aa14.43□□□□□ -0.1
FGD4-214ENST00000550091 NACADO15069 1562 aa14.34□□□□□ -0.11
FGD4-214ENST00000550091 UNC13AQ9UPW8 1703 aa14.27□□□□□ -0.12
FGD4-214ENST00000550091 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
FGD4-214ENST00000550091 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
FGD4-214ENST00000550091 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.14
FGD4-214ENST00000550091 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
FGD4-214ENST00000550091 CECR2Q9BXF3 1484 aa13.99□□□□□ -0.17
FGD4-214ENST00000550091 CC2D2AQ9P2K1 1620 aa13.98□□□□□ -0.17
FGD4-214ENST00000550091 SHROOM4Q9ULL8 1493 aa13.97□□□□□ -0.17
FGD4-214ENST00000550091 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
FGD4-214ENST00000550091 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
FGD4-214ENST00000550091 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
FGD4-214ENST00000550091 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
FGD4-214ENST00000550091 DCAF1Q9Y4B6 1507 aa13.66□□□□□ -0.22
FGD4-214ENST00000550091 CUX2O14529 1486 aa13.6□□□□□ -0.23
FGD4-214ENST00000550091 SCRIBQ14160 1630 aa13.58□□□□□ -0.24
FGD4-214ENST00000550091 ZCCHC6Q5VYS8 1495 aaKnown RBP13.57□□□□□ -0.24
FGD4-214ENST00000550091 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
FGD4-214ENST00000550091 POTEDQ86YR6 584 aa13.45□□□□□ -0.26
FGD4-214ENST00000550091 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
FGD4-214ENST00000550091 DMRT2Q9Y5R5 561 aa13.4□□□□□ -0.26
FGD4-214ENST00000550091 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
FGD4-214ENST00000550091 KCNA4P22459 653 aa13.34□□□□□ -0.27
FGD4-214ENST00000550091 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
FGD4-214ENST00000550091 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
FGD4-214ENST00000550091 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
FGD4-214ENST00000550091 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
FGD4-214ENST00000550091 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
FGD4-214ENST00000550091 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
FGD4-214ENST00000550091 NESP48681 1621 aa13.14□□□□□ -0.31
FGD4-214ENST00000550091 ATAD2BQ9ULI0 1458 aa13.11□□□□□ -0.31
FGD4-214ENST00000550091 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
FGD4-214ENST00000550091 HMGXB3Q12766 1538 aa13.11□□□□□ -0.31
FGD4-214ENST00000550091 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
FGD4-214ENST00000550091 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
FGD4-214ENST00000550091 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
FGD4-214ENST00000550091 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
FGD4-214ENST00000550091 PEG3Q9GZU2 1588 aa12.93□□□□□ -0.34
FGD4-214ENST00000550091 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
FGD4-214ENST00000550091 BAZ1BQ9UIG0 1483 aaKnown RBP12.91□□□□□ -0.34
FGD4-214ENST00000550091 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.35
FGD4-214ENST00000550091 WDR62O43379 1518 aa12.88□□□□□ -0.35
FGD4-214ENST00000550091 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
FGD4-214ENST00000550091 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
FGD4-214ENST00000550091 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
FGD4-214ENST00000550091 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
FGD4-214ENST00000550091 RIMBP3CA6NJZ7 1639 aa12.76□□□□□ -0.37
FGD4-214ENST00000550091 RIMBP3BA6NNM3 1639 aa12.76□□□□□ -0.37
FGD4-214ENST00000550091 RIMBP3Q9UFD9 1639 aa12.76□□□□□ -0.37
FGD4-214ENST00000550091 SLC4A1APQ9BWU0 796 aaKnown RBP12.73□□□□□ -0.37
FGD4-214ENST00000550091 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
FGD4-214ENST00000550091 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
FGD4-214ENST00000550091 ARHGEF11O15085 1522 aa12.66□□□□□ -0.38
FGD4-214ENST00000550091 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
FGD4-214ENST00000550091 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
FGD4-214ENST00000550091 CFTRP13569 1480 aa12.56□□□□□ -0.4
FGD4-214ENST00000550091 CYB5RLQ6IPT4 315 aa12.51□□□□□ -0.41
FGD4-214ENST00000550091 ARAP1Q96P48 1450 aa12.51□□□□□ -0.41
FGD4-214ENST00000550091 WIZO95785 1651 aa12.49□□□□□ -0.41
FGD4-214ENST00000550091 ZNF608Q9ULD9 1512 aaPredicted RBP12.48□□□□□ -0.41
FGD4-214ENST00000550091 TRHP20396 242 aaPredicted RBP12.48□□□□□ -0.41
FGD4-214ENST00000550091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.41
FGD4-214ENST00000550091 IFT140Q96RY7 1462 aa12.46□□□□□ -0.41
FGD4-214ENST00000550091 RSF1Q96T23 1441 aaPredicted RBP12.44□□□□□ -0.42
FGD4-214ENST00000550091 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
FGD4-214ENST00000550091 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
FGD4-214ENST00000550091 CHD1O14646 1710 aa12.41□□□□□ -0.42
FGD4-214ENST00000550091 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
FGD4-214ENST00000550091 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
FGD4-214ENST00000550091 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
FGD4-214ENST00000550091 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
FGD4-214ENST00000550091 TARBP1Q13395 1621 aaKnown RBP12.32□□□□□ -0.44
FGD4-214ENST00000550091 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
FGD4-214ENST00000550091 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
FGD4-214ENST00000550091 CLASP1Q7Z460 1538 aa12.29□□□□□ -0.44
FGD4-214ENST00000550091 AQRO60306 1485 aaKnown RBP eCLIP12.28□□□□□ -0.44
FGD4-214ENST00000550091 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
FGD4-214ENST00000550091 ZBTB22O15209 634 aa12.26□□□□□ -0.45
FGD4-214ENST00000550091 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
FGD4-214ENST00000550091 U3KPZ7 1027 aaPredicted RBP12.26□□□□□ -0.45
FGD4-214ENST00000550091 MYCNP04198 464 aaPredicted RBP12.21□□□□□ -0.45
FGD4-214ENST00000550091 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
FGD4-214ENST00000550091 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
FGD4-214ENST00000550091 FBLN2P98095 1184 aa12.19□□□□□ -0.46
FGD4-214ENST00000550091 POLA1P09884 1462 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms