RNA–Protein interactions for RNA: ENST00000549818.5

TUBA1C-206, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-206ENST00000549818 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
TUBA1C-206ENST00000549818 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
TUBA1C-206ENST00000549818 ABCC9O60706 1549 aa19.75■□□□□ 0.75
TUBA1C-206ENST00000549818 DCAF8L2P0C7V8 631 aa19.05■□□□□ 0.64
TUBA1C-206ENST00000549818 ZCCHC6Q5VYS8 1495 aaKnown RBP18.99■□□□□ 0.63
TUBA1C-206ENST00000549818 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
TUBA1C-206ENST00000549818 NACADO15069 1562 aa18.9■□□□□ 0.62
TUBA1C-206ENST00000549818 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
TUBA1C-206ENST00000549818 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
TUBA1C-206ENST00000549818 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
TUBA1C-206ENST00000549818 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
TUBA1C-206ENST00000549818 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
TUBA1C-206ENST00000549818 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
TUBA1C-206ENST00000549818 SHROOM4Q9ULL8 1493 aa18.23■□□□□ 0.51
TUBA1C-206ENST00000549818 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
TUBA1C-206ENST00000549818 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
TUBA1C-206ENST00000549818 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
TUBA1C-206ENST00000549818 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
TUBA1C-206ENST00000549818 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
TUBA1C-206ENST00000549818 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
TUBA1C-206ENST00000549818 SMARCA4P51532 1647 aa17.71■□□□□ 0.43
TUBA1C-206ENST00000549818 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
TUBA1C-206ENST00000549818 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
TUBA1C-206ENST00000549818 WIZO95785 1651 aa17.51■□□□□ 0.39
TUBA1C-206ENST00000549818 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
TUBA1C-206ENST00000549818 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
TUBA1C-206ENST00000549818 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
TUBA1C-206ENST00000549818 NCAPD3P42695 1498 aa17.4■□□□□ 0.38
TUBA1C-206ENST00000549818 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
TUBA1C-206ENST00000549818 HMGXB3Q12766 1538 aa17.39■□□□□ 0.37
TUBA1C-206ENST00000549818 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
TUBA1C-206ENST00000549818 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
TUBA1C-206ENST00000549818 NESP48681 1621 aa17.14■□□□□ 0.33
TUBA1C-206ENST00000549818 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
TUBA1C-206ENST00000549818 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.32
TUBA1C-206ENST00000549818 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
TUBA1C-206ENST00000549818 LAMC3Q9Y6N6 1575 aa17■□□□□ 0.31
TUBA1C-206ENST00000549818 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
TUBA1C-206ENST00000549818 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
TUBA1C-206ENST00000549818 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
TUBA1C-206ENST00000549818 CFTRP13569 1480 aa16.86■□□□□ 0.29
TUBA1C-206ENST00000549818 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
TUBA1C-206ENST00000549818 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
TUBA1C-206ENST00000549818 FANCD2Q9BXW9 1451 aa16.8■□□□□ 0.28
TUBA1C-206ENST00000549818 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
TUBA1C-206ENST00000549818 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
TUBA1C-206ENST00000549818 URB2Q14146 1524 aaKnown RBP16.67■□□□□ 0.26
TUBA1C-206ENST00000549818 WDR62O43379 1518 aa16.66■□□□□ 0.26
TUBA1C-206ENST00000549818 CUX2O14529 1486 aa16.65■□□□□ 0.26
TUBA1C-206ENST00000549818 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
TUBA1C-206ENST00000549818 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
TUBA1C-206ENST00000549818 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
TUBA1C-206ENST00000549818 CUX1P39880 1505 aa16.52■□□□□ 0.24
TUBA1C-206ENST00000549818 SYNJ1O43426 1573 aa16.46■□□□□ 0.23
TUBA1C-206ENST00000549818 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
TUBA1C-206ENST00000549818 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
TUBA1C-206ENST00000549818 RAD54L2Q9Y4B4 1467 aa16.41■□□□□ 0.22
TUBA1C-206ENST00000549818 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
TUBA1C-206ENST00000549818 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
TUBA1C-206ENST00000549818 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
TUBA1C-206ENST00000549818 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.211e-11■□□□□ 11.1
TUBA1C-206ENST00000549818 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
TUBA1C-206ENST00000549818 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
TUBA1C-206ENST00000549818 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
TUBA1C-206ENST00000549818 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
TUBA1C-206ENST00000549818 SOGA1O94964 1423 aa16.32■□□□□ 0.2
TUBA1C-206ENST00000549818 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.22e-19■■■■□ 21
TUBA1C-206ENST00000549818 PBRM1Q86U86 1689 aa16.27■□□□□ 0.19
TUBA1C-206ENST00000549818 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
TUBA1C-206ENST00000549818 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
TUBA1C-206ENST00000549818 CHD1O14646 1710 aa16.22■□□□□ 0.19
TUBA1C-206ENST00000549818 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
TUBA1C-206ENST00000549818 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
TUBA1C-206ENST00000549818 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
TUBA1C-206ENST00000549818 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
TUBA1C-206ENST00000549818 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
TUBA1C-206ENST00000549818 FBLN2P98095 1184 aa16.08■□□□□ 0.16
TUBA1C-206ENST00000549818 ADAMTS12P58397 1594 aa16.07■□□□□ 0.16
TUBA1C-206ENST00000549818 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
TUBA1C-206ENST00000549818 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
TUBA1C-206ENST00000549818 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
TUBA1C-206ENST00000549818 SYNJ2O15056 1496 aa16■□□□□ 0.15
TUBA1C-206ENST00000549818 KIF27Q86VH2 1401 aa16■□□□□ 0.15
TUBA1C-206ENST00000549818 DNAJC5Q9H3Z4 198 aa15.99■□□□□ 0.15
TUBA1C-206ENST00000549818 CHMP7Q8WUX9 453 aaPredicted RBP15.97■□□□□ 0.15
TUBA1C-206ENST00000549818 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
TUBA1C-206ENST00000549818 CUL7Q14999 1698 aa15.95■□□□□ 0.14
TUBA1C-206ENST00000549818 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
TUBA1C-206ENST00000549818 CEP170Q5SW79 1584 aa15.93■□□□□ 0.14
TUBA1C-206ENST00000549818 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
TUBA1C-206ENST00000549818 IGF1RP08069 1367 aa15.91■□□□□ 0.14
TUBA1C-206ENST00000549818 CLASP1Q7Z460 1538 aa15.9■□□□□ 0.14
TUBA1C-206ENST00000549818 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
TUBA1C-206ENST00000549818 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
TUBA1C-206ENST00000549818 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
TUBA1C-206ENST00000549818 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
TUBA1C-206ENST00000549818 CARMIL1Q5VZK9 1371 aa15.84■□□□□ 0.13
TUBA1C-206ENST00000549818 EEA1Q15075 1411 aa15.84■□□□□ 0.13
TUBA1C-206ENST00000549818 CSRNP3Q8WYN3 585 aa15.82■□□□□ 0.12
TUBA1C-206ENST00000549818 NUP160Q12769 1436 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms