RNA–Protein interactions for RNA: ENST00000549730.5

LMBR1L-213, Transcript of limb development membrane protein 1 like, humanhuman

TSL 5

Gene LMBR1L, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-213ENST00000549730 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
LMBR1L-213ENST00000549730 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
LMBR1L-213ENST00000549730 ABCC9O60706 1549 aa21.49■■□□□ 1.03
LMBR1L-213ENST00000549730 RB1CC1Q8TDY2 1594 aa20.72■□□□□ 0.91
LMBR1L-213ENST00000549730 NACADO15069 1562 aa20.68■□□□□ 0.9
LMBR1L-213ENST00000549730 MYO15BQ96JP2 1530 aa20.55■□□□□ 0.88
LMBR1L-213ENST00000549730 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
LMBR1L-213ENST00000549730 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
LMBR1L-213ENST00000549730 DCAF1Q9Y4B6 1507 aa20.38■□□□□ 0.85
LMBR1L-213ENST00000549730 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
LMBR1L-213ENST00000549730 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.793e-7■■■■□ 25.8
LMBR1L-213ENST00000549730 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
LMBR1L-213ENST00000549730 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
LMBR1L-213ENST00000549730 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
LMBR1L-213ENST00000549730 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
LMBR1L-213ENST00000549730 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
LMBR1L-213ENST00000549730 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
LMBR1L-213ENST00000549730 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
LMBR1L-213ENST00000549730 BAZ1AQ9NRL2 1556 aaPredicted RBP19.08■□□□□ 0.65
LMBR1L-213ENST00000549730 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
LMBR1L-213ENST00000549730 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
LMBR1L-213ENST00000549730 SMARCA2P51531 1590 aa19.04■□□□□ 0.64
LMBR1L-213ENST00000549730 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
LMBR1L-213ENST00000549730 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
LMBR1L-213ENST00000549730 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
LMBR1L-213ENST00000549730 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
LMBR1L-213ENST00000549730 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
LMBR1L-213ENST00000549730 WIZO95785 1651 aa18.61■□□□□ 0.57
LMBR1L-213ENST00000549730 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
LMBR1L-213ENST00000549730 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
LMBR1L-213ENST00000549730 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
LMBR1L-213ENST00000549730 CUX2O14529 1486 aa18.52■□□□□ 0.56
LMBR1L-213ENST00000549730 NESP48681 1621 aa18.52■□□□□ 0.55
LMBR1L-213ENST00000549730 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
LMBR1L-213ENST00000549730 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
LMBR1L-213ENST00000549730 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
LMBR1L-213ENST00000549730 THOC2Q8NI27 1593 aaKnown RBP18.34■□□□□ 0.53
LMBR1L-213ENST00000549730 CFTRP13569 1480 aa18.33■□□□□ 0.53
LMBR1L-213ENST00000549730 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
LMBR1L-213ENST00000549730 MRC2Q9UBG0 1479 aa18.27■□□□□ 0.52
LMBR1L-213ENST00000549730 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
LMBR1L-213ENST00000549730 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
LMBR1L-213ENST00000549730 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
LMBR1L-213ENST00000549730 WDR62O43379 1518 aa18.21■□□□□ 0.51
LMBR1L-213ENST00000549730 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
LMBR1L-213ENST00000549730 DNAJC5Q9H3Z4 198 aa18.05■□□□□ 0.48
LMBR1L-213ENST00000549730 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
LMBR1L-213ENST00000549730 ABCC8Q09428 1581 aa18.03■□□□□ 0.48
LMBR1L-213ENST00000549730 SUPT5HO00267 1087 aaKnown RBP17.95■□□□□ 0.46
LMBR1L-213ENST00000549730 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
LMBR1L-213ENST00000549730 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
LMBR1L-213ENST00000549730 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
LMBR1L-213ENST00000549730 POLA1P09884 1462 aaPredicted RBP17.76■□□□□ 0.43
LMBR1L-213ENST00000549730 TARBP1Q13395 1621 aaKnown RBP17.73■□□□□ 0.43
LMBR1L-213ENST00000549730 ZNF608Q9ULD9 1512 aaPredicted RBP17.72■□□□□ 0.43
LMBR1L-213ENST00000549730 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
LMBR1L-213ENST00000549730 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
LMBR1L-213ENST00000549730 CUX1P39880 1505 aa17.7■□□□□ 0.42
LMBR1L-213ENST00000549730 SOGA1O94964 1423 aa17.7■□□□□ 0.42
LMBR1L-213ENST00000549730 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
LMBR1L-213ENST00000549730 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
LMBR1L-213ENST00000549730 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
LMBR1L-213ENST00000549730 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.414e-8■■■■■ 40.3
LMBR1L-213ENST00000549730 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
LMBR1L-213ENST00000549730 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
LMBR1L-213ENST00000549730 TOP2BQ02880 1626 aa17.56■□□□□ 0.4
LMBR1L-213ENST00000549730 BIVM-ERCC5R4GMW8 1640 aa17.56■□□□□ 0.4
LMBR1L-213ENST00000549730 ABCA10Q8WWZ4 1543 aa17.56■□□□□ 0.4
LMBR1L-213ENST00000549730 GRIN2BQ13224 1484 aa17.55■□□□□ 0.4
LMBR1L-213ENST00000549730 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
LMBR1L-213ENST00000549730 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
LMBR1L-213ENST00000549730 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
LMBR1L-213ENST00000549730 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
LMBR1L-213ENST00000549730 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
LMBR1L-213ENST00000549730 CHD1O14646 1710 aa17.47■□□□□ 0.39
LMBR1L-213ENST00000549730 FBLN2P98095 1184 aa17.45■□□□□ 0.38
LMBR1L-213ENST00000549730 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
LMBR1L-213ENST00000549730 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
LMBR1L-213ENST00000549730 CHMP7Q8WUX9 453 aaPredicted RBP17.43■□□□□ 0.38
LMBR1L-213ENST00000549730 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
LMBR1L-213ENST00000549730 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
LMBR1L-213ENST00000549730 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
LMBR1L-213ENST00000549730 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
LMBR1L-213ENST00000549730 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
LMBR1L-213ENST00000549730 CLASP1Q7Z460 1538 aa17.33■□□□□ 0.37
LMBR1L-213ENST00000549730 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
LMBR1L-213ENST00000549730 ADAMTS12P58397 1594 aa17.32■□□□□ 0.36
LMBR1L-213ENST00000549730 FHAD1B1AJZ9 1412 aa17.32■□□□□ 0.36
LMBR1L-213ENST00000549730 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
LMBR1L-213ENST00000549730 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
LMBR1L-213ENST00000549730 NUP160Q12769 1436 aa17.23■□□□□ 0.35
LMBR1L-213ENST00000549730 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
LMBR1L-213ENST00000549730 CUL7Q14999 1698 aa17.18■□□□□ 0.34
LMBR1L-213ENST00000549730 CEP170Q5SW79 1584 aa17.17■□□□□ 0.34
LMBR1L-213ENST00000549730 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
LMBR1L-213ENST00000549730 IGF1RP08069 1367 aa17.14■□□□□ 0.33
LMBR1L-213ENST00000549730 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
LMBR1L-213ENST00000549730 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
LMBR1L-213ENST00000549730 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
LMBR1L-213ENST00000549730 KIAA0586Q9BVV6 1533 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms