RNA–Protein interactions for RNA: ENST00000549601.1

ITGA5-205, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 505 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-205ENST00000549601 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
ITGA5-205ENST00000549601 AEBP2Q6ZN18 517 aaPredicted RBP21.62■■□□□ 1.05
ITGA5-205ENST00000549601 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
ITGA5-205ENST00000549601 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
ITGA5-205ENST00000549601 ABCC9O60706 1549 aa19.44■□□□□ 0.7
ITGA5-205ENST00000549601 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
ITGA5-205ENST00000549601 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.57
ITGA5-205ENST00000549601 NACADO15069 1562 aa18.6■□□□□ 0.57
ITGA5-205ENST00000549601 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
ITGA5-205ENST00000549601 ZCCHC6Q5VYS8 1495 aaKnown RBP18.41■□□□□ 0.54
ITGA5-205ENST00000549601 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
ITGA5-205ENST00000549601 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
ITGA5-205ENST00000549601 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
ITGA5-205ENST00000549601 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
ITGA5-205ENST00000549601 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
ITGA5-205ENST00000549601 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
ITGA5-205ENST00000549601 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
ITGA5-205ENST00000549601 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
ITGA5-205ENST00000549601 SHROOM4Q9ULL8 1493 aa17.9■□□□□ 0.46
ITGA5-205ENST00000549601 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
ITGA5-205ENST00000549601 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
ITGA5-205ENST00000549601 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
ITGA5-205ENST00000549601 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
ITGA5-205ENST00000549601 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
ITGA5-205ENST00000549601 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
ITGA5-205ENST00000549601 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
ITGA5-205ENST00000549601 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
ITGA5-205ENST00000549601 FOXD1Q16676 465 aa17.09■□□□□ 0.33
ITGA5-205ENST00000549601 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
ITGA5-205ENST00000549601 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
ITGA5-205ENST00000549601 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
ITGA5-205ENST00000549601 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
ITGA5-205ENST00000549601 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
ITGA5-205ENST00000549601 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
ITGA5-205ENST00000549601 WIZO95785 1651 aa16.82■□□□□ 0.28
ITGA5-205ENST00000549601 NESP48681 1621 aa16.78■□□□□ 0.28
ITGA5-205ENST00000549601 ERCC6Q03468 1493 aa16.77■□□□□ 0.28
ITGA5-205ENST00000549601 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
ITGA5-205ENST00000549601 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
ITGA5-205ENST00000549601 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
ITGA5-205ENST00000549601 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
ITGA5-205ENST00000549601 CUX2O14529 1486 aa16.65■□□□□ 0.26
ITGA5-205ENST00000549601 CFTRP13569 1480 aa16.57■□□□□ 0.24
ITGA5-205ENST00000549601 CCDC88BA6NC98 1476 aa16.53■□□□□ 0.24
ITGA5-205ENST00000549601 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
ITGA5-205ENST00000549601 THOC2Q8NI27 1593 aaKnown RBP16.48■□□□□ 0.23
ITGA5-205ENST00000549601 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
ITGA5-205ENST00000549601 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
ITGA5-205ENST00000549601 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
ITGA5-205ENST00000549601 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
ITGA5-205ENST00000549601 WDR62O43379 1518 aa16.39■□□□□ 0.21
ITGA5-205ENST00000549601 DNAJC5Q9H3Z4 198 aa16.36■□□□□ 0.21
ITGA5-205ENST00000549601 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
ITGA5-205ENST00000549601 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
ITGA5-205ENST00000549601 ADRA2BP18089 450 aa16.25■□□□□ 0.19
ITGA5-205ENST00000549601 PRDM2Q13029 1718 aa16.23■□□□□ 0.19
ITGA5-205ENST00000549601 ABCC8Q09428 1581 aa16.23■□□□□ 0.19
ITGA5-205ENST00000549601 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
ITGA5-205ENST00000549601 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
ITGA5-205ENST00000549601 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
ITGA5-205ENST00000549601 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
ITGA5-205ENST00000549601 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
ITGA5-205ENST00000549601 POLA1P09884 1462 aaPredicted RBP16.04■□□□□ 0.16
ITGA5-205ENST00000549601 SOGA1O94964 1423 aa16.03■□□□□ 0.16
ITGA5-205ENST00000549601 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
ITGA5-205ENST00000549601 CUX1P39880 1505 aa16.02■□□□□ 0.15
ITGA5-205ENST00000549601 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
ITGA5-205ENST00000549601 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
ITGA5-205ENST00000549601 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.156e-7■■■■■ 32.3
ITGA5-205ENST00000549601 FGD5Q6ZNL6 1462 aa15.98■□□□□ 0.15
ITGA5-205ENST00000549601 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
ITGA5-205ENST00000549601 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
ITGA5-205ENST00000549601 WRNQ14191 1432 aaPredicted RBP eCLIP15.91■□□□□ 0.14
ITGA5-205ENST00000549601 MSH5O43196 834 aa15.86■□□□□ 0.13
ITGA5-205ENST00000549601 FBLN2P98095 1184 aa15.86■□□□□ 0.13
ITGA5-205ENST00000549601 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
ITGA5-205ENST00000549601 ABCA10Q8WWZ4 1543 aa15.84■□□□□ 0.13
ITGA5-205ENST00000549601 GRIN2BQ13224 1484 aa15.83■□□□□ 0.12
ITGA5-205ENST00000549601 TOP2BQ02880 1626 aa15.83■□□□□ 0.12
ITGA5-205ENST00000549601 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
ITGA5-205ENST00000549601 CHMP7Q8WUX9 453 aaPredicted RBP15.81■□□□□ 0.12
ITGA5-205ENST00000549601 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
ITGA5-205ENST00000549601 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
ITGA5-205ENST00000549601 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
ITGA5-205ENST00000549601 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
ITGA5-205ENST00000549601 SYNJ2O15056 1496 aa15.73■□□□□ 0.11
ITGA5-205ENST00000549601 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
ITGA5-205ENST00000549601 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
ITGA5-205ENST00000549601 CHD1O14646 1710 aa15.69■□□□□ 0.1
ITGA5-205ENST00000549601 ARHGEF11O15085 1522 aa15.65■□□□□ 0.1
ITGA5-205ENST00000549601 PBRM1Q86U86 1689 aa15.65■□□□□ 0.1
ITGA5-205ENST00000549601 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
ITGA5-205ENST00000549601 FHAD1B1AJZ9 1412 aa15.64■□□□□ 0.09
ITGA5-205ENST00000549601 RIMBP3CA6NJZ7 1639 aa15.62■□□□□ 0.09
ITGA5-205ENST00000549601 RIMBP3BA6NNM3 1639 aa15.62■□□□□ 0.09
ITGA5-205ENST00000549601 RIMBP3Q9UFD9 1639 aa15.62■□□□□ 0.09
ITGA5-205ENST00000549601 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
ITGA5-205ENST00000549601 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
ITGA5-205ENST00000549601 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
ITGA5-205ENST00000549601 CLASP1Q7Z460 1538 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms