RNA–Protein interactions for RNA: ENST00000549527.1

AC027288.3-201, humanhuman

TSL 2

Gene AC027288.3, Length 433 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027288.3-201ENST00000549527 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
AC027288.3-201ENST00000549527 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
AC027288.3-201ENST00000549527 ABCC9O60706 1549 aa19.84■□□□□ 0.77
AC027288.3-201ENST00000549527 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
AC027288.3-201ENST00000549527 NACADO15069 1562 aa18.78■□□□□ 0.6
AC027288.3-201ENST00000549527 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.59
AC027288.3-201ENST00000549527 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
AC027288.3-201ENST00000549527 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
AC027288.3-201ENST00000549527 ZCCHC6Q5VYS8 1495 aaKnown RBP18.45■□□□□ 0.54
AC027288.3-201ENST00000549527 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
AC027288.3-201ENST00000549527 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
AC027288.3-201ENST00000549527 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
AC027288.3-201ENST00000549527 DCAF1Q9Y4B6 1507 aa18.29■□□□□ 0.52
AC027288.3-201ENST00000549527 SCRIBQ14160 1630 aa18.26■□□□□ 0.51
AC027288.3-201ENST00000549527 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
AC027288.3-201ENST00000549527 CC2D2AQ9P2K1 1620 aa18■□□□□ 0.47
AC027288.3-201ENST00000549527 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.46
AC027288.3-201ENST00000549527 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
AC027288.3-201ENST00000549527 SMARCA4P51532 1647 aa17.39■□□□□ 0.38
AC027288.3-201ENST00000549527 HMGXB3Q12766 1538 aa17.28■□□□□ 0.36
AC027288.3-201ENST00000549527 SMARCA2P51531 1590 aa17.27■□□□□ 0.35
AC027288.3-201ENST00000549527 ATAD2BQ9ULI0 1458 aa17.25■□□□□ 0.35
AC027288.3-201ENST00000549527 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
AC027288.3-201ENST00000549527 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
AC027288.3-201ENST00000549527 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
AC027288.3-201ENST00000549527 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
AC027288.3-201ENST00000549527 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
AC027288.3-201ENST00000549527 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
AC027288.3-201ENST00000549527 NESP48681 1621 aa17.07■□□□□ 0.32
AC027288.3-201ENST00000549527 CUX2O14529 1486 aa17.05■□□□□ 0.32
AC027288.3-201ENST00000549527 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
AC027288.3-201ENST00000549527 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
AC027288.3-201ENST00000549527 WIZO95785 1651 aa16.99■□□□□ 0.31
AC027288.3-201ENST00000549527 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
AC027288.3-201ENST00000549527 DNAJC5Q9H3Z4 198 aa16.78■□□□□ 0.28
AC027288.3-201ENST00000549527 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
AC027288.3-201ENST00000549527 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
AC027288.3-201ENST00000549527 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
AC027288.3-201ENST00000549527 WDR62O43379 1518 aa16.72■□□□□ 0.27
AC027288.3-201ENST00000549527 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
AC027288.3-201ENST00000549527 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
AC027288.3-201ENST00000549527 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
AC027288.3-201ENST00000549527 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
AC027288.3-201ENST00000549527 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
AC027288.3-201ENST00000549527 CFTRP13569 1480 aa16.58■□□□□ 0.24
AC027288.3-201ENST00000549527 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
AC027288.3-201ENST00000549527 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
AC027288.3-201ENST00000549527 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
AC027288.3-201ENST00000549527 TOPBP1Q92547 1522 aa16.33■□□□□ 0.2
AC027288.3-201ENST00000549527 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.2
AC027288.3-201ENST00000549527 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
AC027288.3-201ENST00000549527 CHD1O14646 1710 aa16.28■□□□□ 0.2
AC027288.3-201ENST00000549527 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
AC027288.3-201ENST00000549527 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
AC027288.3-201ENST00000549527 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
AC027288.3-201ENST00000549527 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
AC027288.3-201ENST00000549527 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
AC027288.3-201ENST00000549527 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
AC027288.3-201ENST00000549527 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
AC027288.3-201ENST00000549527 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
AC027288.3-201ENST00000549527 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
AC027288.3-201ENST00000549527 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
AC027288.3-201ENST00000549527 FGD5Q6ZNL6 1462 aa16.09■□□□□ 0.17
AC027288.3-201ENST00000549527 CUX1P39880 1505 aa16.09■□□□□ 0.17
AC027288.3-201ENST00000549527 ARHGEF11O15085 1522 aa16.08■□□□□ 0.16
AC027288.3-201ENST00000549527 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
AC027288.3-201ENST00000549527 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.16
AC027288.3-201ENST00000549527 OSCARQ8IYS5 282 aa16.06■□□□□ 0.16
AC027288.3-201ENST00000549527 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
AC027288.3-201ENST00000549527 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
AC027288.3-201ENST00000549527 SOGA1O94964 1423 aa15.96■□□□□ 0.15
AC027288.3-201ENST00000549527 CLASP1Q7Z460 1538 aa15.95■□□□□ 0.14
AC027288.3-201ENST00000549527 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
AC027288.3-201ENST00000549527 TDRD9Q8NDG6 1382 aaKnown RBP15.93■□□□□ 0.14
AC027288.3-201ENST00000549527 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
AC027288.3-201ENST00000549527 ARAP1Q96P48 1450 aa15.92■□□□□ 0.14
AC027288.3-201ENST00000549527 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
AC027288.3-201ENST00000549527 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
AC027288.3-201ENST00000549527 TOP2BQ02880 1626 aa15.87■□□□□ 0.13
AC027288.3-201ENST00000549527 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
AC027288.3-201ENST00000549527 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
AC027288.3-201ENST00000549527 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
AC027288.3-201ENST00000549527 SYNJ2O15056 1496 aa15.85■□□□□ 0.13
AC027288.3-201ENST00000549527 FBLN2P98095 1184 aa15.85■□□□□ 0.13
AC027288.3-201ENST00000549527 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
AC027288.3-201ENST00000549527 CEP170Q5SW79 1584 aa15.77■□□□□ 0.11
AC027288.3-201ENST00000549527 WRNQ14191 1432 aaPredicted RBP eCLIP15.76■□□□□ 0.11
AC027288.3-201ENST00000549527 GRIN2AQ12879 1464 aa15.74■□□□□ 0.11
AC027288.3-201ENST00000549527 CYB5RLQ6IPT4 315 aa15.73■□□□□ 0.11
AC027288.3-201ENST00000549527 ERCC6L2Q5T890 1561 aa15.72■□□□□ 0.11
AC027288.3-201ENST00000549527 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
AC027288.3-201ENST00000549527 SHROOM2Q13796 1616 aa15.71■□□□□ 0.11
AC027288.3-201ENST00000549527 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
AC027288.3-201ENST00000549527 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
AC027288.3-201ENST00000549527 NUP160Q12769 1436 aa15.65■□□□□ 0.1
AC027288.3-201ENST00000549527 FHAD1B1AJZ9 1412 aa15.61■□□□□ 0.09
AC027288.3-201ENST00000549527 CUL7Q14999 1698 aa15.58■□□□□ 0.08
AC027288.3-201ENST00000549527 TRHP20396 242 aaPredicted RBP15.56■□□□□ 0.08
AC027288.3-201ENST00000549527 KIF13AQ9H1H9 1805 aa15.56■□□□□ 0.08
AC027288.3-201ENST00000549527 PRG4Q92954 1404 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms