RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 NISCHQ9Y2I1 1504 aa27.98■■■□□ 2.07
TROAP-209ENST00000549275 ABCC9O60706 1549 aa27.06■■□□□ 1.92
TROAP-209ENST00000549275 DNAJC5BQ9UF47 199 aa26.68■■□□□ 1.86
TROAP-209ENST00000549275 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
TROAP-209ENST00000549275 DNAJC5Q9H3Z4 198 aa25.69■■□□□ 1.7
TROAP-209ENST00000549275 RB1CC1Q8TDY2 1594 aa25.21■■□□□ 1.63
TROAP-209ENST00000549275 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
TROAP-209ENST00000549275 NACADO15069 1562 aa24.72■■□□□ 1.55
TROAP-209ENST00000549275 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
TROAP-209ENST00000549275 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
TROAP-209ENST00000549275 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
TROAP-209ENST00000549275 CC2D2AQ9P2K1 1620 aa24.38■■□□□ 1.49
TROAP-209ENST00000549275 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
TROAP-209ENST00000549275 DCAF8L2P0C7V8 631 aa24.17■■□□□ 1.46
TROAP-209ENST00000549275 CUX2O14529 1486 aa24.06■■□□□ 1.44
TROAP-209ENST00000549275 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
TROAP-209ENST00000549275 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
TROAP-209ENST00000549275 TRIM41Q8WV44 630 aa23.83■■□□□ 1.41
TROAP-209ENST00000549275 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
TROAP-209ENST00000549275 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
TROAP-209ENST00000549275 DCAF1Q9Y4B6 1507 aa23.12■■□□□ 1.29
TROAP-209ENST00000549275 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
TROAP-209ENST00000549275 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
TROAP-209ENST00000549275 ZCCHC6Q5VYS8 1495 aaKnown RBP22.88■■□□□ 1.25
TROAP-209ENST00000549275 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
TROAP-209ENST00000549275 NESP48681 1621 aa22.8■■□□□ 1.24
TROAP-209ENST00000549275 OSCARQ8IYS5 282 aa22.72■■□□□ 1.23
TROAP-209ENST00000549275 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
TROAP-209ENST00000549275 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
TROAP-209ENST00000549275 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
TROAP-209ENST00000549275 LAMC3Q9Y6N6 1575 aa22.54■■□□□ 1.2
TROAP-209ENST00000549275 HMGXB3Q12766 1538 aa22.52■■□□□ 1.2
TROAP-209ENST00000549275 PDS5BQ9NTI5 1447 aa22.51■■□□□ 1.19
TROAP-209ENST00000549275 RIMBP3CA6NJZ7 1639 aa22.44■■□□□ 1.18
TROAP-209ENST00000549275 RIMBP3BA6NNM3 1639 aa22.44■■□□□ 1.18
TROAP-209ENST00000549275 RIMBP3Q9UFD9 1639 aa22.44■■□□□ 1.18
TROAP-209ENST00000549275 TRHP20396 242 aaPredicted RBP22.43■■□□□ 1.18
TROAP-209ENST00000549275 KIF21AQ7Z4S6 1674 aa22.4■■□□□ 1.18
TROAP-209ENST00000549275 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
TROAP-209ENST00000549275 WDR62O43379 1518 aa22.32■■□□□ 1.16
TROAP-209ENST00000549275 ARHGEF11O15085 1522 aa22.27■■□□□ 1.16
TROAP-209ENST00000549275 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
TROAP-209ENST00000549275 CYB5RLQ6IPT4 315 aa22.22■■□□□ 1.15
TROAP-209ENST00000549275 ILDR1Q86SU0 546 aaPredicted RBP22.14■■□□□ 1.13
TROAP-209ENST00000549275 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
TROAP-209ENST00000549275 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
TROAP-209ENST00000549275 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
TROAP-209ENST00000549275 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
TROAP-209ENST00000549275 ARAP1Q96P48 1450 aa21.94■■□□□ 1.1
TROAP-209ENST00000549275 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
TROAP-209ENST00000549275 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
TROAP-209ENST00000549275 URB2Q14146 1524 aaKnown RBP21.66■■□□□ 1.06
TROAP-209ENST00000549275 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
TROAP-209ENST00000549275 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
TROAP-209ENST00000549275 CFTRP13569 1480 aa21.52■■□□□ 1.04
TROAP-209ENST00000549275 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
TROAP-209ENST00000549275 CHD1O14646 1710 aa21.43■■□□□ 1.02
TROAP-209ENST00000549275 FBLN2P98095 1184 aa21.41■■□□□ 1.02
TROAP-209ENST00000549275 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
TROAP-209ENST00000549275 KDM4FA0A1W2PPD8 638 aa21.33■■□□□ 1.01
TROAP-209ENST00000549275 CLASP1Q7Z460 1538 aa21.29■■□□□ 1
TROAP-209ENST00000549275 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.994e-8■■■■□ 24.6
TROAP-209ENST00000549275 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
TROAP-209ENST00000549275 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
TROAP-209ENST00000549275 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
TROAP-209ENST00000549275 FBXO41Q8TF61 875 aa21.17■□□□□ 0.98
TROAP-209ENST00000549275 SYNJ1O43426 1573 aa21.17■□□□□ 0.98
TROAP-209ENST00000549275 ERCC6L2Q5T890 1561 aa21.13■□□□□ 0.97
TROAP-209ENST00000549275 TARBP1Q13395 1621 aaKnown RBP21.09■□□□□ 0.97
TROAP-209ENST00000549275 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
TROAP-209ENST00000549275 WIZO95785 1651 aa21.08■□□□□ 0.96
TROAP-209ENST00000549275 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
TROAP-209ENST00000549275 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
TROAP-209ENST00000549275 LMTK3Q96Q04 1460 aa21■□□□□ 0.95
TROAP-209ENST00000549275 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
TROAP-209ENST00000549275 KIF13AQ9H1H9 1805 aa20.97■□□□□ 0.95
TROAP-209ENST00000549275 MAGI1Q96QZ7 1491 aaPredicted RBP20.96■□□□□ 0.95
TROAP-209ENST00000549275 HECW2Q9P2P5 1572 aa20.94■□□□□ 0.94
TROAP-209ENST00000549275 SOCS7O14512 581 aa20.92■□□□□ 0.94
TROAP-209ENST00000549275 WDR97A6NE52 1622 aa20.9■□□□□ 0.94
TROAP-209ENST00000549275 SYNJ2O15056 1496 aa20.9■□□□□ 0.94
TROAP-209ENST00000549275 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
TROAP-209ENST00000549275 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
TROAP-209ENST00000549275 KDM6BO15054 1643 aa20.86■□□□□ 0.93
TROAP-209ENST00000549275 FAM69CQ0P6D2 419 aa20.86■□□□□ 0.93
TROAP-209ENST00000549275 ABCC10Q5T3U5 1492 aa20.84■□□□□ 0.93
TROAP-209ENST00000549275 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
TROAP-209ENST00000549275 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
TROAP-209ENST00000549275 SOGA1O94964 1423 aa20.8■□□□□ 0.92
TROAP-209ENST00000549275 ADGRL1O94910 1474 aa20.79■□□□□ 0.92
TROAP-209ENST00000549275 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
TROAP-209ENST00000549275 ILDR2Q71H61 639 aa20.66■□□□□ 0.9
TROAP-209ENST00000549275 MAPKBP1O60336 1514 aa20.66■□□□□ 0.9
TROAP-209ENST00000549275 DIP2BQ9P265 1576 aa20.66■□□□□ 0.9
TROAP-209ENST00000549275 CEP170Q5SW79 1584 aa20.65■□□□□ 0.9
TROAP-209ENST00000549275 NPM1P06748 294 aaKnown RBP eCLIP20.65■□□□□ 0.9
TROAP-209ENST00000549275 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
TROAP-209ENST00000549275 DISP3Q9P2K9 1392 aa20.56■□□□□ 0.88
TROAP-209ENST00000549275 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
TROAP-209ENST00000549275 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms