RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 NISCHQ9Y2I1 1504 aa48.51■■■■■ 5.36
SLC48A1-207ENST00000549243 CCDC180Q9P1Z9 1646 aa43.41■■■■■ 4.54
SLC48A1-207ENST00000549243 ABCC9O60706 1549 aa43.13■■■■■ 4.5
SLC48A1-207ENST00000549243 RB1CC1Q8TDY2 1594 aa41.16■■■■■ 4.18
SLC48A1-207ENST00000549243 NACADO15069 1562 aa40.92■■■■■ 4.14
SLC48A1-207ENST00000549243 DCAF8L2P0C7V8 631 aa40.89■■■■■ 4.14
SLC48A1-207ENST00000549243 MYO15BQ96JP2 1530 aa40.4■■■■■ 4.06
SLC48A1-207ENST00000549243 UNC13AQ9UPW8 1703 aa40.34■■■■■ 4.05
SLC48A1-207ENST00000549243 ZCCHC6Q5VYS8 1495 aaKnown RBP40.27■■■■■ 4.04
SLC48A1-207ENST00000549243 PABPN1Q86U42 306 aaKnown RBP eCLIP40.2■■■■■ 4.03
SLC48A1-207ENST00000549243 DNAJC5BQ9UF47 199 aa40.13■■■■■ 4.01
SLC48A1-207ENST00000549243 DCAF1Q9Y4B6 1507 aa40.03■■■■■ 4
SLC48A1-207ENST00000549243 BICRAQ9NZM4 1560 aa39.96■■■■□ 3.99
SLC48A1-207ENST00000549243 SCRIBQ14160 1630 aa39.65■■■■□ 3.94
SLC48A1-207ENST00000549243 SHROOM4Q9ULL8 1493 aa39.35■■■■□ 3.89
SLC48A1-207ENST00000549243 CC2D2AQ9P2K1 1620 aa38.97■■■■□ 3.83
SLC48A1-207ENST00000549243 EIF4G1Q04637 1599 aaKnown RBP38.95■■■■□ 3.83
SLC48A1-207ENST00000549243 CECR2Q9BXF3 1484 aa38.79■■■■□ 3.8
SLC48A1-207ENST00000549243 SMARCA4P51532 1647 aa37.81■■■■□ 3.64
SLC48A1-207ENST00000549243 NCAPD3P42695 1498 aa37.75■■■■□ 3.63
SLC48A1-207ENST00000549243 ATAD2BQ9ULI0 1458 aa37.71■■■■□ 3.63
SLC48A1-207ENST00000549243 BAZ1AQ9NRL2 1556 aaPredicted RBP37.64■■■■□ 3.62
SLC48A1-207ENST00000549243 SMARCA2P51531 1590 aa37.63■■■■□ 3.62
SLC48A1-207ENST00000549243 HMGXB3Q12766 1538 aa37.53■■■■□ 3.6
SLC48A1-207ENST00000549243 MROH2BQ7Z745 1585 aa37.42■■■■□ 3.58
SLC48A1-207ENST00000549243 BAZ1BQ9UIG0 1483 aaKnown RBP37.4■■■■□ 3.58
SLC48A1-207ENST00000549243 PEG3Q9GZU2 1588 aa37.38■■■■□ 3.57
SLC48A1-207ENST00000549243 ERCC6Q03468 1493 aa37.2■■■■□ 3.55
SLC48A1-207ENST00000549243 NESP48681 1621 aa37.15■■■■□ 3.54
SLC48A1-207ENST00000549243 WIZO95785 1651 aa37.03■■■■□ 3.52
SLC48A1-207ENST00000549243 CUX2O14529 1486 aa36.95■■■■□ 3.51
SLC48A1-207ENST00000549243 LAMC3Q9Y6N6 1575 aa36.89■■■■□ 3.5
SLC48A1-207ENST00000549243 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
SLC48A1-207ENST00000549243 RSF1Q96T23 1441 aaPredicted RBP36.73■■■■□ 3.47
SLC48A1-207ENST00000549243 THOC2Q8NI27 1593 aaKnown RBP36.7■■■■□ 3.46
SLC48A1-207ENST00000549243 PDS5BQ9NTI5 1447 aa36.64■■■■□ 3.46
SLC48A1-207ENST00000549243 CADPSQ9ULU8 1353 aa36.64■■■■□ 3.46
SLC48A1-207ENST00000549243 DNAJC5Q9H3Z4 198 aa36.57■■■■□ 3.44
SLC48A1-207ENST00000549243 TOP2AP11388 1531 aaKnown RBP36.53■■■■□ 3.44
SLC48A1-207ENST00000549243 MRC2Q9UBG0 1479 aa36.34■■■■□ 3.41
SLC48A1-207ENST00000549243 CFTRP13569 1480 aa36.29■■■■□ 3.4
SLC48A1-207ENST00000549243 CEP164Q9UPV0 1460 aa36.27■■■■□ 3.4
SLC48A1-207ENST00000549243 FANCD2Q9BXW9 1451 aa36.26■■■■□ 3.4
SLC48A1-207ENST00000549243 WDR62O43379 1518 aa36.23■■■■□ 3.39
SLC48A1-207ENST00000549243 CCDC88BA6NC98 1476 aa36.11■■■■□ 3.37
SLC48A1-207ENST00000549243 PRDM2Q13029 1718 aa36.08■■■■□ 3.37
SLC48A1-207ENST00000549243 URB2Q14146 1524 aaKnown RBP35.95■■■■□ 3.35
SLC48A1-207ENST00000549243 TOPBP1Q92547 1522 aa35.62■■■■□ 3.29
SLC48A1-207ENST00000549243 DNMBPQ6XZF7 1577 aa35.52■■■■□ 3.28
SLC48A1-207ENST00000549243 ABCC8Q09428 1581 aa35.51■■■■□ 3.27
SLC48A1-207ENST00000549243 IFT140Q96RY7 1462 aa35.5■■■■□ 3.27
SLC48A1-207ENST00000549243 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
SLC48A1-207ENST00000549243 SUPT5HO00267 1087 aaKnown RBP35.44■■■■□ 3.26
SLC48A1-207ENST00000549243 OSCARQ8IYS5 282 aa35.34■■■■□ 3.25
SLC48A1-207ENST00000549243 EIF4G3O43432 1585 aaKnown RBP35.31■■■■□ 3.24
SLC48A1-207ENST00000549243 TARBP1Q13395 1621 aaKnown RBP35.28■■■■□ 3.24
SLC48A1-207ENST00000549243 POLA1P09884 1462 aaPredicted RBP35.27■■■■□ 3.24
SLC48A1-207ENST00000549243 TRIM41Q8WV44 630 aa35.21■■■■□ 3.23
SLC48A1-207ENST00000549243 AQRO60306 1485 aaKnown RBP eCLIP35.18■■■■□ 3.22
SLC48A1-207ENST00000549243 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
SLC48A1-207ENST00000549243 CUX1P39880 1505 aa35.13■■■■□ 3.21
SLC48A1-207ENST00000549243 FGD5Q6ZNL6 1462 aa35.11■■■■□ 3.21
SLC48A1-207ENST00000549243 SOGA1O94964 1423 aa35.1■■■■□ 3.21
SLC48A1-207ENST00000549243 CHD1O14646 1710 aa35.03■■■■□ 3.2
SLC48A1-207ENST00000549243 TDRD9Q8NDG6 1382 aaKnown RBP35.02■■■■□ 3.2
SLC48A1-207ENST00000549243 FBLN2P98095 1184 aa34.92■■■■□ 3.18
SLC48A1-207ENST00000549243 RIMBP3CA6NJZ7 1639 aa34.92■■■■□ 3.18
SLC48A1-207ENST00000549243 RIMBP3BA6NNM3 1639 aa34.92■■■■□ 3.18
SLC48A1-207ENST00000549243 RIMBP3Q9UFD9 1639 aa34.92■■■■□ 3.18
SLC48A1-207ENST00000549243 WDR97A6NE52 1622 aa34.88■■■■□ 3.17
SLC48A1-207ENST00000549243 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
SLC48A1-207ENST00000549243 ARHGEF11O15085 1522 aa34.81■■■■□ 3.16
SLC48A1-207ENST00000549243 GRIN2BQ13224 1484 aa34.76■■■■□ 3.15
SLC48A1-207ENST00000549243 PBRM1Q86U86 1689 aa34.74■■■■□ 3.15
SLC48A1-207ENST00000549243 MAGI1Q96QZ7 1491 aaPredicted RBP34.71■■■■□ 3.15
SLC48A1-207ENST00000549243 ABCA10Q8WWZ4 1543 aa34.7■■■■□ 3.14
SLC48A1-207ENST00000549243 GAPVD1Q14C86 1478 aa34.69■■■■□ 3.14
SLC48A1-207ENST00000549243 BIVM-ERCC5R4GMW8 1640 aa34.67■■■■□ 3.14
SLC48A1-207ENST00000549243 CHMP7Q8WUX9 453 aaPredicted RBP34.67■■■■□ 3.14
SLC48A1-207ENST00000549243 TOP2BQ02880 1626 aa34.66■■■■□ 3.14
SLC48A1-207ENST00000549243 SYNJ1O43426 1573 aa34.66■■■■□ 3.14
SLC48A1-207ENST00000549243 WRNQ14191 1432 aaPredicted RBP eCLIP34.65■■■■□ 3.144e-7■■■■■ 80.6
SLC48A1-207ENST00000549243 ABCA5Q8WWZ7 1642 aa34.65■■■■□ 3.14
SLC48A1-207ENST00000549243 SYNJ2O15056 1496 aa34.6■■■■□ 3.13
SLC48A1-207ENST00000549243 CLASP1Q7Z460 1538 aa34.55■■■■□ 3.12
SLC48A1-207ENST00000549243 CYB5RLQ6IPT4 315 aa34.54■■■■□ 3.12
SLC48A1-207ENST00000549243 ARAP1Q96P48 1450 aa34.49■■■■□ 3.11
SLC48A1-207ENST00000549243 ADAMTS12P58397 1594 aa34.37■■■■□ 3.09
SLC48A1-207ENST00000549243 GRIN2AQ12879 1464 aa34.33■■■■□ 3.09
SLC48A1-207ENST00000549243 ERICH3Q5RHP9 1530 aa34.27■■■■□ 3.08
SLC48A1-207ENST00000549243 FHAD1B1AJZ9 1412 aa34.24■■■■□ 3.07
SLC48A1-207ENST00000549243 CEP170Q5SW79 1584 aa34.22■■■■□ 3.07
SLC48A1-207ENST00000549243 NUP160Q12769 1436 aa34.16■■■■□ 3.06
SLC48A1-207ENST00000549243 ERCC6L2Q5T890 1561 aa34.09■■■■□ 3.05
SLC48A1-207ENST00000549243 TRHP20396 242 aaPredicted RBP34.08■■■■□ 3.05
SLC48A1-207ENST00000549243 SHROOM2Q13796 1616 aa34.02■■■■□ 3.04
SLC48A1-207ENST00000549243 KIF27Q86VH2 1401 aa33.96■■■■□ 3.03
SLC48A1-207ENST00000549243 IGF1RP08069 1367 aa33.89■■■■□ 3.02
SLC48A1-207ENST00000549243 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
SLC48A1-207ENST00000549243 CUL7Q14999 1698 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms