RNA–Protein interactions for RNA: ENST00000549198.1

KRT8-212, Transcript of keratin 8, humanhuman

TSL 2

Gene KRT8, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT8-212ENST00000549198 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
KRT8-212ENST00000549198 CCDC180Q9P1Z9 1646 aa29.85■■■□□ 2.37
KRT8-212ENST00000549198 ABCC9O60706 1549 aa28.71■■■□□ 2.19
KRT8-212ENST00000549198 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.13
KRT8-212ENST00000549198 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
KRT8-212ENST00000549198 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
KRT8-212ENST00000549198 NACADO15069 1562 aa27.97■■■□□ 2.07
KRT8-212ENST00000549198 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
KRT8-212ENST00000549198 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
KRT8-212ENST00000549198 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
KRT8-212ENST00000549198 SHROOM4Q9ULL8 1493 aa27.34■■□□□ 1.97
KRT8-212ENST00000549198 UNC13AQ9UPW8 1703 aa27.19■■□□□ 1.94
KRT8-212ENST00000549198 PABPN1Q86U42 306 aaKnown RBP eCLIP27.01■■□□□ 1.91
KRT8-212ENST00000549198 BICRAQ9NZM4 1560 aa26.95■■□□□ 1.9
KRT8-212ENST00000549198 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
KRT8-212ENST00000549198 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
KRT8-212ENST00000549198 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.79
KRT8-212ENST00000549198 SMARCA4P51532 1647 aa26.2■■□□□ 1.78
KRT8-212ENST00000549198 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.78
KRT8-212ENST00000549198 RSF1Q96T23 1441 aaPredicted RBP26.15■■□□□ 1.78
KRT8-212ENST00000549198 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
KRT8-212ENST00000549198 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
KRT8-212ENST00000549198 WIZO95785 1651 aa25.95■■□□□ 1.74
KRT8-212ENST00000549198 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
KRT8-212ENST00000549198 SMARCA2P51531 1590 aa25.91■■□□□ 1.74
KRT8-212ENST00000549198 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
KRT8-212ENST00000549198 NCAPD3P42695 1498 aa25.81■■□□□ 1.72
KRT8-212ENST00000549198 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
KRT8-212ENST00000549198 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
KRT8-212ENST00000549198 HMGXB3Q12766 1538 aa25.69■■□□□ 1.7
KRT8-212ENST00000549198 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
KRT8-212ENST00000549198 CCDC88BA6NC98 1476 aa25.44■■□□□ 1.66
KRT8-212ENST00000549198 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
KRT8-212ENST00000549198 CFTRP13569 1480 aa25.08■■□□□ 1.6
KRT8-212ENST00000549198 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
KRT8-212ENST00000549198 NESP48681 1621 aa25.01■■□□□ 1.59
KRT8-212ENST00000549198 PDS5BQ9NTI5 1447 aa24.88■■□□□ 1.57
KRT8-212ENST00000549198 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
KRT8-212ENST00000549198 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.56
KRT8-212ENST00000549198 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
KRT8-212ENST00000549198 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
KRT8-212ENST00000549198 ERCC6Q03468 1493 aa24.7■■□□□ 1.55
KRT8-212ENST00000549198 KIF21AQ7Z4S6 1674 aa24.7■■□□□ 1.54
KRT8-212ENST00000549198 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
KRT8-212ENST00000549198 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
KRT8-212ENST00000549198 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
KRT8-212ENST00000549198 MRC2Q9UBG0 1479 aa24.55■■□□□ 1.52
KRT8-212ENST00000549198 CUX1P39880 1505 aa24.53■■□□□ 1.52
KRT8-212ENST00000549198 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
KRT8-212ENST00000549198 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
KRT8-212ENST00000549198 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
KRT8-212ENST00000549198 TOPBP1Q92547 1522 aa24.49■■□□□ 1.51
KRT8-212ENST00000549198 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
KRT8-212ENST00000549198 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
KRT8-212ENST00000549198 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
KRT8-212ENST00000549198 WDR62O43379 1518 aa24.4■■□□□ 1.5
KRT8-212ENST00000549198 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
KRT8-212ENST00000549198 POLA1P09884 1462 aaPredicted RBP24.32■■□□□ 1.48
KRT8-212ENST00000549198 SOGA1O94964 1423 aa24.3■■□□□ 1.48
KRT8-212ENST00000549198 RAD54L2Q9Y4B4 1467 aa24.25■■□□□ 1.47
KRT8-212ENST00000549198 CUX2O14529 1486 aa24.21■■□□□ 1.47
KRT8-212ENST00000549198 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
KRT8-212ENST00000549198 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
KRT8-212ENST00000549198 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
KRT8-212ENST00000549198 FAM9AQ8IZU1 332 aaPredicted RBP24.13■■□□□ 1.45
KRT8-212ENST00000549198 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
KRT8-212ENST00000549198 TDRD9Q8NDG6 1382 aaKnown RBP24.09■■□□□ 1.45
KRT8-212ENST00000549198 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
KRT8-212ENST00000549198 EEA1Q15075 1411 aa24.06■■□□□ 1.44
KRT8-212ENST00000549198 WDR97A6NE52 1622 aa24.05■■□□□ 1.44
KRT8-212ENST00000549198 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
KRT8-212ENST00000549198 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
KRT8-212ENST00000549198 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.439e-7■■■■■ 28.7
KRT8-212ENST00000549198 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
KRT8-212ENST00000549198 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
KRT8-212ENST00000549198 IGF1RP08069 1367 aa23.93■■□□□ 1.42
KRT8-212ENST00000549198 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
KRT8-212ENST00000549198 GRIN2BQ13224 1484 aa23.89■■□□□ 1.42
KRT8-212ENST00000549198 ERICH3Q5RHP9 1530 aa23.87■■□□□ 1.41
KRT8-212ENST00000549198 PBRM1Q86U86 1689 aa23.84■■□□□ 1.41
KRT8-212ENST00000549198 CARMIL1Q5VZK9 1371 aa23.82■■□□□ 1.4
KRT8-212ENST00000549198 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
KRT8-212ENST00000549198 CUL7Q14999 1698 aa23.76■■□□□ 1.39
KRT8-212ENST00000549198 PRXQ9BXM0 1461 aa23.76■■□□□ 1.39
KRT8-212ENST00000549198 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
KRT8-212ENST00000549198 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
KRT8-212ENST00000549198 FHAD1B1AJZ9 1412 aa23.74■■□□□ 1.39
KRT8-212ENST00000549198 MAGI1Q96QZ7 1491 aaPredicted RBP23.74■■□□□ 1.39
KRT8-212ENST00000549198 RAPGEF2Q9Y4G8 1499 aa23.72■■□□□ 1.39
KRT8-212ENST00000549198 CHMP7Q8WUX9 453 aaPredicted RBP23.71■■□□□ 1.39
KRT8-212ENST00000549198 KIF21BO75037 1637 aa23.7■■□□□ 1.39
KRT8-212ENST00000549198 FBLN2P98095 1184 aa23.7■■□□□ 1.38
KRT8-212ENST00000549198 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
KRT8-212ENST00000549198 UBTFP17480 764 aaKnown RBP23.67■■□□□ 1.38
KRT8-212ENST00000549198 GOLGA3Q08378 1498 aa23.67■■□□□ 1.38
KRT8-212ENST00000549198 SYNJ2O15056 1496 aa23.65■■□□□ 1.38
KRT8-212ENST00000549198 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
KRT8-212ENST00000549198 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
KRT8-212ENST00000549198 CHD1O14646 1710 aa23.5■■□□□ 1.35
KRT8-212ENST00000549198 NUP160Q12769 1436 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms