RNA–Protein interactions for RNA: ENST00000549197.1

YLPM1-204, Transcript of YLP motif containing 1, humanhuman

TSL 1 (best)

Gene YLPM1, Length 2,085 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YLPM1-204ENST00000549197 NISCHQ9Y2I1 1504 aa22.66■■□□□ 1.22
YLPM1-204ENST00000549197 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
YLPM1-204ENST00000549197 ABCC9O60706 1549 aa19.8■□□□□ 0.76
YLPM1-204ENST00000549197 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
YLPM1-204ENST00000549197 NACADO15069 1562 aa19.03■□□□□ 0.64
YLPM1-204ENST00000549197 MYO15BQ96JP2 1530 aa18.93■□□□□ 0.62
YLPM1-204ENST00000549197 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
YLPM1-204ENST00000549197 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
YLPM1-204ENST00000549197 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
YLPM1-204ENST00000549197 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
YLPM1-204ENST00000549197 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.56
YLPM1-204ENST00000549197 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
YLPM1-204ENST00000549197 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
YLPM1-204ENST00000549197 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
YLPM1-204ENST00000549197 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
YLPM1-204ENST00000549197 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
YLPM1-204ENST00000549197 AEBP2Q6ZN18 517 aaPredicted RBP18.25■□□□□ 0.51
YLPM1-204ENST00000549197 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
YLPM1-204ENST00000549197 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
YLPM1-204ENST00000549197 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.44
YLPM1-204ENST00000549197 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
YLPM1-204ENST00000549197 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
YLPM1-204ENST00000549197 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
YLPM1-204ENST00000549197 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
YLPM1-204ENST00000549197 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
YLPM1-204ENST00000549197 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
YLPM1-204ENST00000549197 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
YLPM1-204ENST00000549197 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
YLPM1-204ENST00000549197 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
YLPM1-204ENST00000549197 WIZO95785 1651 aa17.23■□□□□ 0.35
YLPM1-204ENST00000549197 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
YLPM1-204ENST00000549197 NESP48681 1621 aa17.1■□□□□ 0.33
YLPM1-204ENST00000549197 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
YLPM1-204ENST00000549197 ERCC6Q03468 1493 aa17.08■□□□□ 0.33
YLPM1-204ENST00000549197 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
YLPM1-204ENST00000549197 CADPSQ9ULU8 1353 aa17.04■□□□□ 0.32
YLPM1-204ENST00000549197 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
YLPM1-204ENST00000549197 CUX2O14529 1486 aa16.99■□□□□ 0.31
YLPM1-204ENST00000549197 CFTRP13569 1480 aa16.91■□□□□ 0.3
YLPM1-204ENST00000549197 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.3
YLPM1-204ENST00000549197 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
YLPM1-204ENST00000549197 CCDC88BA6NC98 1476 aa16.87■□□□□ 0.29
YLPM1-204ENST00000549197 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
YLPM1-204ENST00000549197 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
YLPM1-204ENST00000549197 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
YLPM1-204ENST00000549197 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
YLPM1-204ENST00000549197 WDR62O43379 1518 aa16.75■□□□□ 0.27
YLPM1-204ENST00000549197 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
YLPM1-204ENST00000549197 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
YLPM1-204ENST00000549197 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
YLPM1-204ENST00000549197 DNAJC5Q9H3Z4 198 aa16.58■□□□□ 0.25
YLPM1-204ENST00000549197 ABCC8Q09428 1581 aa16.57■□□□□ 0.24
YLPM1-204ENST00000549197 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
YLPM1-204ENST00000549197 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
YLPM1-204ENST00000549197 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
YLPM1-204ENST00000549197 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
YLPM1-204ENST00000549197 CUX1P39880 1505 aa16.37■□□□□ 0.21
YLPM1-204ENST00000549197 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
YLPM1-204ENST00000549197 TARBP1Q13395 1621 aaKnown RBP16.36■□□□□ 0.21
YLPM1-204ENST00000549197 SOGA1O94964 1423 aa16.33■□□□□ 0.2
YLPM1-204ENST00000549197 FGD5Q6ZNL6 1462 aa16.32■□□□□ 0.2
YLPM1-204ENST00000549197 RAD54L2Q9Y4B4 1467 aa16.3■□□□□ 0.2
YLPM1-204ENST00000549197 EIF4G3O43432 1585 aaKnown RBP16.29■□□□□ 0.2
YLPM1-204ENST00000549197 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
YLPM1-204ENST00000549197 AQRO60306 1485 aaKnown RBP eCLIP16.27■□□□□ 0.19
YLPM1-204ENST00000549197 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
YLPM1-204ENST00000549197 WRNQ14191 1432 aaPredicted RBP eCLIP16.23■□□□□ 0.19
YLPM1-204ENST00000549197 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
YLPM1-204ENST00000549197 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
YLPM1-204ENST00000549197 BIVM-ERCC5R4GMW8 1640 aa16.21■□□□□ 0.19
YLPM1-204ENST00000549197 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
YLPM1-204ENST00000549197 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
YLPM1-204ENST00000549197 GRIN2BQ13224 1484 aa16.15■□□□□ 0.18
YLPM1-204ENST00000549197 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
YLPM1-204ENST00000549197 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
YLPM1-204ENST00000549197 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
YLPM1-204ENST00000549197 ABCA5Q8WWZ7 1642 aa16.11■□□□□ 0.17
YLPM1-204ENST00000549197 CHD1O14646 1710 aa16.1■□□□□ 0.17
YLPM1-204ENST00000549197 FBLN2P98095 1184 aa16.07■□□□□ 0.16
YLPM1-204ENST00000549197 PBRM1Q86U86 1689 aa16.07■□□□□ 0.16
YLPM1-204ENST00000549197 SYNJ2O15056 1496 aa16.06■□□□□ 0.16
YLPM1-204ENST00000549197 CHMP7Q8WUX9 453 aaPredicted RBP16.06■□□□□ 0.16
YLPM1-204ENST00000549197 ERICH3Q5RHP9 1530 aa16■□□□□ 0.15
YLPM1-204ENST00000549197 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
YLPM1-204ENST00000549197 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
YLPM1-204ENST00000549197 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
YLPM1-204ENST00000549197 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
YLPM1-204ENST00000549197 CLASP1Q7Z460 1538 aa15.96■□□□□ 0.15
YLPM1-204ENST00000549197 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.15
YLPM1-204ENST00000549197 ADAMTS12P58397 1594 aa15.96■□□□□ 0.15
YLPM1-204ENST00000549197 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
YLPM1-204ENST00000549197 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
YLPM1-204ENST00000549197 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
YLPM1-204ENST00000549197 NUP160Q12769 1436 aa15.89■□□□□ 0.13
YLPM1-204ENST00000549197 IGF1RP08069 1367 aa15.88■□□□□ 0.13
YLPM1-204ENST00000549197 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
YLPM1-204ENST00000549197 ARAP1Q96P48 1450 aa15.83■□□□□ 0.13
YLPM1-204ENST00000549197 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
YLPM1-204ENST00000549197 CUL7Q14999 1698 aa15.82■□□□□ 0.12
YLPM1-204ENST00000549197 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms