RNA–Protein interactions for RNA: ENST00000549176.1

KRT8-211, Transcript of keratin 8, humanhuman

TSL 2

Gene KRT8, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT8-211ENST00000549176 NISCHQ9Y2I1 1504 aa27.75■■■□□ 2.03
KRT8-211ENST00000549176 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
KRT8-211ENST00000549176 ABCC9O60706 1549 aa24.1■■□□□ 1.45
KRT8-211ENST00000549176 NACADO15069 1562 aa23.28■■□□□ 1.32
KRT8-211ENST00000549176 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
KRT8-211ENST00000549176 MYO15BQ96JP2 1530 aa23.25■■□□□ 1.31
KRT8-211ENST00000549176 ZCCHC6Q5VYS8 1495 aaKnown RBP23.09■■□□□ 1.29
KRT8-211ENST00000549176 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
KRT8-211ENST00000549176 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
KRT8-211ENST00000549176 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
KRT8-211ENST00000549176 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
KRT8-211ENST00000549176 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
KRT8-211ENST00000549176 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
KRT8-211ENST00000549176 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
KRT8-211ENST00000549176 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
KRT8-211ENST00000549176 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
KRT8-211ENST00000549176 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
KRT8-211ENST00000549176 CECR2Q9BXF3 1484 aa21.73■■□□□ 1.07
KRT8-211ENST00000549176 NCAPD3P42695 1498 aa21.52■■□□□ 1.04
KRT8-211ENST00000549176 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
KRT8-211ENST00000549176 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
KRT8-211ENST00000549176 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
KRT8-211ENST00000549176 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
KRT8-211ENST00000549176 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
KRT8-211ENST00000549176 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
KRT8-211ENST00000549176 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
KRT8-211ENST00000549176 BAZ1BQ9UIG0 1483 aaKnown RBP21.17■□□□□ 0.98
KRT8-211ENST00000549176 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
KRT8-211ENST00000549176 WIZO95785 1651 aa21.07■□□□□ 0.96
KRT8-211ENST00000549176 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
KRT8-211ENST00000549176 NESP48681 1621 aa20.89■□□□□ 0.94
KRT8-211ENST00000549176 TOP2AP11388 1531 aaKnown RBP20.87■□□□□ 0.93
KRT8-211ENST00000549176 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
KRT8-211ENST00000549176 CUX2O14529 1486 aa20.75■□□□□ 0.91
KRT8-211ENST00000549176 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
KRT8-211ENST00000549176 PDS5BQ9NTI5 1447 aa20.71■□□□□ 0.91
KRT8-211ENST00000549176 CFTRP13569 1480 aa20.71■□□□□ 0.91
KRT8-211ENST00000549176 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
KRT8-211ENST00000549176 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
KRT8-211ENST00000549176 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
KRT8-211ENST00000549176 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
KRT8-211ENST00000549176 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
KRT8-211ENST00000549176 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
KRT8-211ENST00000549176 WDR62O43379 1518 aa20.5■□□□□ 0.87
KRT8-211ENST00000549176 CEP164Q9UPV0 1460 aa20.47■□□□□ 0.87
KRT8-211ENST00000549176 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
KRT8-211ENST00000549176 DNAJC5Q9H3Z4 198 aa20.26■□□□□ 0.83
KRT8-211ENST00000549176 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
KRT8-211ENST00000549176 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
KRT8-211ENST00000549176 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
KRT8-211ENST00000549176 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
KRT8-211ENST00000549176 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
KRT8-211ENST00000549176 TARBP1Q13395 1621 aaKnown RBP20.06■□□□□ 0.8
KRT8-211ENST00000549176 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
KRT8-211ENST00000549176 CUX1P39880 1505 aa20.02■□□□□ 0.8
KRT8-211ENST00000549176 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
KRT8-211ENST00000549176 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
KRT8-211ENST00000549176 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
KRT8-211ENST00000549176 SOGA1O94964 1423 aa19.91■□□□□ 0.78
KRT8-211ENST00000549176 EIF4G3O43432 1585 aaKnown RBP19.91■□□□□ 0.78
KRT8-211ENST00000549176 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
KRT8-211ENST00000549176 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
KRT8-211ENST00000549176 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
KRT8-211ENST00000549176 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.775e-8■■■□□ 18.4
KRT8-211ENST00000549176 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
KRT8-211ENST00000549176 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
KRT8-211ENST00000549176 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
KRT8-211ENST00000549176 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
KRT8-211ENST00000549176 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
KRT8-211ENST00000549176 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
KRT8-211ENST00000549176 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
KRT8-211ENST00000549176 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
KRT8-211ENST00000549176 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
KRT8-211ENST00000549176 CHD1O14646 1710 aa19.68■□□□□ 0.74
KRT8-211ENST00000549176 SNAPC4Q5SXM2 1469 aa19.64■□□□□ 0.73
KRT8-211ENST00000549176 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
KRT8-211ENST00000549176 SYNJ2O15056 1496 aa19.61■□□□□ 0.73
KRT8-211ENST00000549176 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
KRT8-211ENST00000549176 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
KRT8-211ENST00000549176 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
KRT8-211ENST00000549176 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
KRT8-211ENST00000549176 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
KRT8-211ENST00000549176 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
KRT8-211ENST00000549176 ARHGEF11O15085 1522 aa19.5■□□□□ 0.71
KRT8-211ENST00000549176 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
KRT8-211ENST00000549176 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
KRT8-211ENST00000549176 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
KRT8-211ENST00000549176 NUP160Q12769 1436 aa19.45■□□□□ 0.7
KRT8-211ENST00000549176 FBLN2P98095 1184 aa19.45■□□□□ 0.7
KRT8-211ENST00000549176 IGF1RP08069 1367 aa19.43■□□□□ 0.7
KRT8-211ENST00000549176 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
KRT8-211ENST00000549176 CEP170Q5SW79 1584 aa19.37■□□□□ 0.69
KRT8-211ENST00000549176 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
KRT8-211ENST00000549176 ARAP1Q96P48 1450 aa19.34■□□□□ 0.69
KRT8-211ENST00000549176 CUL7Q14999 1698 aa19.32■□□□□ 0.68
KRT8-211ENST00000549176 TRIM41Q8WV44 630 aa19.24■□□□□ 0.67
KRT8-211ENST00000549176 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
KRT8-211ENST00000549176 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
KRT8-211ENST00000549176 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
KRT8-211ENST00000549176 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms